NbLib0111: NEI guinea pig lens unnormalized (nbb)

Last GRIST date: 07/17/2008

In collaboration with the Oakland University Eye Research Institute, Rochester MI

View this library: Full List | Indexed by Chromosome | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display. View All Data | << Previous Page | Next Page >>
Group#Description Entrez Gene IdGenBankUniGene (Build Mm #175) Chromosomal Pos. (BLAT)ChromosomeNum. Clones
1
  • Cavia porcellus alphaA-crystallin (Cryaa) mRNA, complete cds
    		•   DQ903937     scaffold_90:2999955
    		   466
    2
  • C.porcellus zeta-crystallin mRNA, complete cds
    		•   M26936     scaffold_2:60333096
    		   331
    3
  • Cavia porcellus gammaS-crystallin (Crygs) mRNA, complete cds
    		•   DQ903939     scaffold_7:51560469
    		   183
    4
  • Cavia porcellus gammaB-crystallin (Crygb) mRNA, complete cds
    		•   EF426307     scaffold_13:41605867
    		   113
    5
  • Cavia porcellus betaB2-crystallin (Crybb2) mRNA, complete cds
    		•   EF457998     scaffold_4:17400141
    		   113
    6
  • Cavia porcellus betaA4-crystallin (Cryba4) mRNA, complete cds
    		•   EF666994     scaffold_4:16274691
    		   112
    7
  • Cavia porcellus mRNA for beta A3-crystallin and beta A1-crystallin
    		•   AJ306650     scaffold_32:23258893
    		   98
    8
  • Cavia porcellus betaB3-crystallin (Crybb3) mRNA, complete cds
    		•   EF457997     scaffold_4:17380590
    		   62
    9
  • Cavia porcellus gammaC-crystallin (Crygc) mRNA, complete cds
    		•   EF426306     scaffold_13:41598802
    		   61
    10
  • Cavia porcellus betaB1-crystallin (Crybb1) mRNA, complete cds
    		•   EF666993     scaffold_4:16283133
    		   45
    11
  • Cavia porcellus lengsin mRNA, complete cds
    		•   DQ324462     scaffold_0:82817481
    		   27
    12
  • Cavia porcellus phakinin (BFSP2) mRNA, complete cds
    		•   EU257503     scaffold_8:30599408
    		   23
    13
  • Cavia porcellus gammaA-crystallin (Cryga) mRNA, complete cds
    		•   EF457999     scaffold_13:41620483
    		   22
    14
  • Cavia porcellus Carbonic anhydrase 3 (CA3) mRNA, complete cds
    		•   EU327786     scaffold_0:28689880
    		   22
    15
  • Cavia porcellus major intrinsic protein (MIP) mRNA, complete cds
    		•   EU327787     scaffold_9:41747444
    		   20
    16
  • Cavia porcellus GRIFIN mRNA, complete cds
    		•   EU259197     scaffold_30:7852906
    		   18
    17
  • Cavia porcellus alphaB-crystallin (Cryab) mRNA, complete cds
    		•   EU252027     scaffold_19:35866012
    		   17
    18
  • Cavia porcellus betaA2-crystallin (Cryba2) mRNA, complete cds
    		•   EF666995     scaffold_89:6184850
    		   14
    19
  • 71% protein similarity to: beaded filament structural protein 1 [Rattus norvegicus]
    		•       scaffold_8:8731044
    		   14
    20
  • Cavia porcellus mRNA for glyceraldehyde 3-phosphate dehydrogenase, partial cds
    		•   AB060340     scaffold_107:692374
    scaffold_98:2234756
    		   13
    21
  • Cavia porcellus ferritin light chain mRNA, complete cds
    		•   AF233445     scaffold_18:26161112
    scaffold_70:8357754
    		   12
    22
  • 100% protein similarity to: eukaryotic translation elongation factor 1 alpha-like 3 [Homo sapiens]
    		•       scaffold_39:16953606
    scaffold_4:46684547
    		   12
    23
  • PREDICTED: Canis familiaris ribosomal protein, large, P0, transcript variant 3 (RPLP0), mRNA
    		• 403645
    		XM_852951     scaffold_4:5346693
    		   9
    24
  • Cavia porcellus E-FABP (FABP5) mRNA, complete cds
    		•   EU264005     scaffold_0:32608418
    		   9
    25
  • Cavia porcellus TPT1 (TPT1) mRNA, complete cds
    		•   EU330893     scaffold_6:55557050
    		   9
    26
  • 86% protein similarity to: cytochrome b5 reductase 1 (B5R.1) [Rattus norvegicus]
    		•       scaffold_134:1756073
    		   9
    27
  • Cavia porcellus alpha-enolase (Eno1) mRNA, complete cds
    		•   EU306867     scaffold_25:24439715
    		   8
    28
  • PREDICTED: Rattus norvegicus similar to tubulin, alpha 1 (LOC499494), mRNA
    		• 499494
    		XR_006181     scaffold_9:50407437
    		   8
    29
  • 79% protein similarity to: Serpin B6
    		•       scaffold_38:300085
    		   8
    30
  • 98% protein similarity to: ribosomal protein L4 variant [Homo sapiens]
    		•       scaffold_101:833616
    		   7
    31
  • 72% protein similarity to: Prostaglandin-H2 D-isomerase precursor (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS)
    		•       scaffold_18:38334358
    		   7
    32
  • 95% protein similarity to: Cyclin-G1
    		•       scaffold_17:9982695
    		   7
    33
  • 76% protein similarity to: Signal transducer CD24 precursor (Small cell lung carcinoma cluster 4 antigen)
    		•       scaffold_63:6797444
    		   6
    34
  • Cavia porcellus gammaN-crystallin (Crygn) mRNA, complete cds
    		•   EU257500     scaffold_32:1063355
    		   5
    35
  • Cavia porcellus beta actin mRNA, complete cds
    		•   AF508792     scaffold_30:10929859
    		   5
    36
  • 100% protein similarity to: laminin receptor homolog [Homo sapiens]
    		•       scaffold_148:1551842
    		   5
    37
  • 98% protein similarity to: vimentin [Bos taurus]
    		•       scaffold_120:1615969
    		   5
    38
  • 93% protein similarity to: calcium-regulated heat-stable protein 1 [Homo sapiens]
    		•       scaffold_4:28057512
    		   4
    39
  • 98% protein similarity to: elongation factor 1 gamma [Oryctolagus cuniculus]
    		•       scaffold_44:15162184
    		   4
    40
  • 97% protein similarity to: STAM binding protein-like 1 [Homo sapiens]
    		•       scaffold_15:1432905
    		   4
    41
  • 89% protein similarity to: aldehyde dehydrogenase 1A1 variant [Homo sapiens]
    		•       scaffold_21:24332402
    		   4
    42
  • 99% protein similarity to: ribosomal protein L21 [Homo sapiens]
    		•       scaffold_1:48587256
    scaffold_6:28978823     		  4
    43
  • 89% protein similarity to: dickkopf homolog 3 precursor [Homo sapiens]
    		•       scaffold_67:2814955
    		   4
    44
  • 93% protein similarity to: gap junction membrane channel protein alpha 8 [Rattus norvegicus]
    		•       scaffold_2:45959144
    		   4
    45
  • 100% protein similarity to: actin gamma 1 [synthetic construct]
    		•       scaffold_76:6016358
    		   4
    46
  • Cavia porcellus mRNA for ferritin heavy chain, complete cds
    		•   AB073371     scaffold_65:9448230
    		   3
    47
  • Cavia cobaya mRNA for ubiquitin, complete cds
    		•   D83208     scaffold_178:1202659
    		   3
    48
  • 97% protein similarity to: Apolipoprotein E precursor (Apo-E)
    		•       scaffold_80:5358388
    		   3
    49
  • 82% protein similarity to: ornithine decarboxylase antizyme [Homo sapiens]
    		•       scaffold_369:299656
    		   3
    50
  • 99% protein similarity to: GNAS complex locus [Sus scrofa]
    		•       scaffold_156:1169642
    		   3
    51
  • 99% protein similarity to: ribosomal protein L13 [Homo sapiens]
    		•       scaffold_232:317722
    		   3
    52
  • Unidentified nbb23d02
    		•       scaffold_193:313650
    		   3
    53
  • 99% protein similarity to: ribosomal protein L5 variant [Homo sapiens]
    		•       scaffold_2:18645529
    		   3
    54
  • 96% protein similarity to: chaperonin containing TCP1, subunit 5 (epsilon) [Homo sapiens]
    		•       scaffold_55:2865388
    		   3
    55
  • 99% protein similarity to: Chain A, Crystal Structure Of The Human Laminin Receptor Precursor
    		•       scaffold_7:43283896
    		   3
    56
  • 90% protein similarity to: heat shock protein HSP27
    		•       scaffold_30:1810005
    		   3
    57
  • 99% protein similarity to: mitogen-activated protein kinase kinase 6 [Bos taurus]
    		•       scaffold_3:71914298
    		   3
    58
  • 96% protein similarity to: 60S ribosomal protein L6
    		•       scaffold_115:3592174
    		   3
    59
  • Unidentified nbb08b10
    		•       scaffold_4:28056833
    		   3
    60
  • 97% protein similarity to: PGK1 [Homo sapiens]
    		•       scaffold_26:18362690
    		   3
    61
  • 88% protein similarity to: mitogen-activated protein kinase 8 interacting protein 1 [Homo sapiens]
    		•       scaffold_72:5436334
    		   3
    62
  • 97% protein similarity to: ribosomal protein L13A [Rattus norvegicus]
    		•       scaffold_70:8010493
    		   3
    63
  • Unidentified nbb06a04
    		•       scaffold_37:5635460
    		   3
    64
  • 97% protein similarity to: BM-010 [Homo sapiens]
    		•       scaffold_209:188352
    scaffold_7:51727958
    		   3
    65
  • Unidentified nbb06e10
    		•       scaffold_23:2451061
    		   3
    66
  • 96% protein similarity to: RNA-binding region containing protein 1 isoform a [Homo sapiens]
    		•       scaffold_96:118894
    		   3
    67
  • 98% protein similarity to: Rpl17 protein [Mus musculus]
    		•       scaffold_14:16066817
    		   3
    68
  • PREDICTED: Equus caballus similar to PNAS-106 (LOC100056098), mRNA
    		• 100056098
    		XM_001493216     scaffold_0:15320622
    		   2
    69
  • Bos taurus Y box binding protein 1 (YBX1), mRNA
    		• 287023
    		NM_174815     scaffold_133:1964147
    		   2
    70
  • Cavia porcellus Cu/Zn superoxide dismutase (SOD1) mRNA, partial cds
    		•   AY466105     scaffold_52:1829007
    		   2
    71
  • PREDICTED: Canis familiaris similar to DEAD-box protein 3, X-chromosomal (Helicase-like protein 2) (HLP2) (DEAD-box, X isoform), transcript variant 7 (LOC480886), mRNA
    		• 480886
    		XM_856327     scaffold_33:17173558
    		   2
    72
  • 99% protein similarity to: proteasome 26S ATPase subunit 5 variant [Homo sapiens]
    		•       scaffold_65:4942709
    		   2
    73
  • 94% protein similarity to: chromosome 9 open reading frame 78 [Homo sapiens]
    		•       scaffold_27:2936585
    		   2
    74
  • Unidentified nbb03h03
    		•           2
    75
  • 80% protein similarity to: tudor domain containing 7 [synthetic construct]
    		•       scaffold_27:19034225
    		   2
    76
  • Unidentified nbb05d07
    		•       scaffold_51:3400858
    		   2
    77
  • 97% protein similarity to: Chain A, Complex Between Protein SerTHR PHOSPHATASE-1 (Delta) And The Myosin Phosphatase Targeting Subunit 1 (Mypt1)
    		•       scaffold_18:10430785
    		   2
    78
  • 85% protein similarity to: FK506-binding protein 38 [Homo sapiens]
    		•       scaffold_72:8111131
    		   2
    79
  • 99% protein similarity to: fragile X mental retardation-related protein 1 isoform 1 [Mus musculus]
    		•       scaffold_47:11818049
    		   2
    80
  • 96% protein similarity to: ribosomal protein P1 isoform 1 [Homo sapiens]
    		•       scaffold_5:58921338
    		   2
    81
  • 99% protein similarity to: ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [synthetic construct]
    		•       scaffold_3:9759445
    		   2
    82
  • 100% protein similarity to: growth arrest specific 7 [Mus musculus]
    		•       scaffold_61:6501829
    		   2
    83
  • 100% protein similarity to: ribosomal protein L15 [Bos taurus]
    		•       scaffold_0:72905998
    		   2
    84
  • 100% protein similarity to: PREDICTED: similar to heat shock protein 90 [Pan troglodytes]
    		•       scaffold_15:30616214
    		   2
    85
  • 99% protein similarity to: ribosomal protein L8 [synthetic construct]
    		•       scaffold_95:3892959
    		   2
    86
  • Unidentified nbb15e06
    		•       scaffold_9:41755296
    		   2
    87
  • 81% protein similarity to: RD RNA-binding protein [Bos taurus]
    		•       scaffold_15:41024889
    		   2
    88
  • 99% protein similarity to: ribosomal protein S3 [Mus musculus]
    		•       scaffold_103:273749
    		   2
    89
  • 100% protein similarity to: ribosomal protein L27a [Mus musculus]
    		•       scaffold_134:506623
    		   2
    90
  • 76% protein similarity to: nucleostemin [Mus musculus]
    		•       scaffold_0:55860372
    		   2
    91
  • Unidentified nbb38b09
    		•       scaffold_4:13150947
    		   2
    92
  • 100% protein similarity to: H3 histone, family 3A [Homo sapiens]
    		•       scaffold_137:2632458
    		   2
    93
  • 98% protein similarity to: ribosomal protein L9 [Rattus norvegicus]
    		•       scaffold_24:13811818
    		   2
    94
  • Unidentified nbb31f12
    		•       scaffold_2:39176091
    		   2
    95
  • Unidentified nbb29g06
    		•       scaffold_4:19053432
    		   2
    96
  • 92% protein similarity to: Aldo-keto reductase family 1, member B3 (aldose reductase) [Mus musculus]
    		•       scaffold_44:8775349
    		   2
    97
  • 100% protein similarity to: ribosomal protein S12 [Homo sapiens]
    		•       scaffold_68:169227
    		   2
    98
  • 98% protein similarity to: ATPase, Na+/K+ transporting, alpha 1 polypeptide [synthetic construct]
    		•       scaffold_2:40795208
    		   2
    99
  • Unidentified nbb25c11
    		•       scaffold_39:15016723
    		   2
    100
  • 100% protein similarity to: Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State
    		•       scaffold_19:25399996
    		   2


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