NbLib0110: NEI guinea pig retina unnormalized (naz)

Last GRIST date: 07/17/2008

In collaboration with the Oakland University Eye Research Institute, Rochester MI

View this library: Full List | Indexed by Chromosome | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display. View All Data | << Previous Page | Next Page >>
Group#Description Entrez Gene IdGenBankUniGene (Build Mm #175) Chromosomal Pos. (BLAT)ChromosomeNum. Clones
1
  • Cavia porcellus rhodopsin (Rho) mRNA, complete cds
    		•   EF457995     scaffold_109:2850696
    		   64
    2
  • Cavia porcellus S-antigen (Sag) mRNA, complete cds
    		•   EF457996     scaffold_13:28688974
    		   24
    3
  • Cavia porcellus beta-transducin (Gnb1) mRNA, complete cds
    		•   EU257501     scaffold_186:765364
    		   22
    4
  • 96% protein similarity to: ALDOC protein [Homo sapiens]
    		•       scaffold_32:23888532
    		   21
    5
  • Cavia porcellus mRNA for glyceraldehyde 3-phosphate dehydrogenase, partial cds
    		•   AB060340     scaffold_107:692555
    scaffold_98:2234797
    		   14
    6
  • Cavia porcellus alpha-transducin (Gnat1) mRNA, complete cds
    		•   EU257502     scaffold_8:25226741
    		   12
    7
  • Cavia porcellus violet-sensitive visual pigment (SWS1) mRNA, complete cds
    		•   AY552608     scaffold_11:49245830
    		   9
    8
  • 100% protein similarity to: PREDICTED: similar to elongation factor 1 alpha isoform 2 [Monodelphis domestica]
    		•       scaffold_39:16953803
    scaffold_4:46683679
    		   9
    9
  • 96% protein similarity to: Chain A, Crystal Structure Of Apo Glutamine Synthetase From Dog ( Canis Familiaris)
    		•       scaffold_12:2500432
    		   9
    10
  • Cavia porcellus leucine zipper transcription factor (NRL) mRNA, complete cds
    		•   EU477759     scaffold_13:16749246
    		   8
    11
  • 91% protein similarity to: Phosducin (PHD) (33 kDa phototransducing protein)
    		•       scaffold_12:34430224
    		   8
    12
  • 95% protein similarity to: Creatine kinase B-type (Creatine kinase B chain) (B-CK)
    		•       scaffold_111:3087381
    		   8
    13
  • Cavia porcellus alpha-enolase (Eno1) mRNA, complete cds
    		•   EU306867     scaffold_25:24437440
    		   7
    14
  • 69% protein similarity to: unc-119 homolog [Bos taurus]
    		•       scaffold_32:23911821
    		   7
    15
  • 95% protein similarity to: aryl hydrocarbon receptor interacting protein-like 1 [Bos taurus]
    		•       scaffold_32:17249810
    		   6
    16
  • 93% protein similarity to: carboxypeptidase E preproprotein [Homo sapiens]
    		•       scaffold_1:53289970
    		   6
    17
  • Unidentified naz12g10
    		•       scaffold_186:788042
    		   6
    18
  • 89% protein similarity to: Peripherin-2 (Retinal degeneration slow protein)
    		•       scaffold_15:31640870
    		   6
    19
  • PREDICTED: Canis familiaris similar to synaptosomal-associated protein 25, transcript variant 5 (LOC477158), mRNA
    		• 477158
    		XM_854022     scaffold_8:15238731
    		   5
    20
  • Cavia cobaya mRNA for ubiquitin, complete cds
    		•   D83208     scaffold_178:1203654
    		   5
    21
  • Cavia porcellus cGMP-phosphodiesterase 6 gamma subunit (cGMP-PDE6 gamma) mRNA, complete cds
    		•   AF132929     scaffold_76:6118357
    		   5
    22
  • 97% protein similarity to: guanine nucleotide binding protein, alpha transducing 2 [Mus musculus]
    		•       scaffold_2:33755613
    		   5
    23
  • 92% protein similarity to: islet-specific glucose-6-phosphatase-related protein isoform 1 [Homo sapiens]
    		•       scaffold_3:20370127
    		   5
    24
  • 87% protein similarity to: guanylate cyclase activator 1B [Rattus norvegicus]
    		•       scaffold_15:32023727
    		   5
    25
  • 97% protein similarity to: ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 [Mus musculus]
    		•       scaffold_14:19065376
    		   5
    26
  • 100% protein similarity to: Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State
    		•       scaffold_19:25400685
    		   5
    27
  • 95% protein similarity to: pyruvate kinase 3 [Bos taurus]
    		•       scaffold_5:61122223
    		   5
    28
  • Cavia porcellus cytoplasmic actin mRNA, partial cds
    		•   AF191277     scaffold_76:6016387
    		   4
    29
  • PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 4A2, transcript variant 3 (LOC488118), mRNA
    		• 488118
    		XM_855263     scaffold_209:188331
    scaffold_7:51728737
    		   4
    30
  • 95% protein similarity to: testis enhanced gene transcript [Mus musculus]
    		•       scaffold_9:49896675
    		   4
    31
  • 97% protein similarity to: histone H3.2 [Culex pipiens quinquefasciatus]
    		•       scaffold_193:313669
    		   4
    32
  • 96% protein similarity to: tubby like protein 1 [Mus musculus]
    		•       scaffold_15:36722389
    		   4
    33
  • 94% protein similarity to: guanylate cyclase activator 1a (retina) [Rattus norvegicus]
    		•       scaffold_15:32031015
    		   4
    34
  • 96% protein similarity to: small nuclear ribonucleoprotein polypeptide B [Homo sapiens]
    		•       scaffold_8:22066365
    		   4
    35
  • 92% protein similarity to: N-myc downstream regulated gene 1 variant [Homo sapiens]
    		•       scaffold_51:3397086
    		   4
    36
  • 85% protein similarity to: Serotransferrin precursor (Transferrin) (Siderophilin) (Beta-1 metal-binding globulin)
    		•       scaffold_8:30903764
    		   4
    37
  • 85% protein similarity to: Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein homolog)
    		•       scaffold_64:3221694
    		   4
    38
  • 94% protein similarity to: 1-acylglycerol-3-phosphate O-acyltransferase 3 [Rattus norvegicus]
    		•       scaffold_90:656113
    		   4
    39
  • Oryctolagus cuniculus Y box binding protein 1 (YBX1), mRNA
    		• 100009583
    		NM_001082785     scaffold_133:1964184
    		   3
    40
  • PREDICTED: Canis familiaris similar to Poly(rC)-binding protein 4 (Alpha-CP4), transcript variant 1 (LOC476603), mRNA
    		• 476603
    		XM_533807     scaffold_8:26951307
    		   3
    41
  • PREDICTED: Canis familiaris similar to Splicing factor, arginine/serine-rich 5 (Pre-mRNA splicing factor SRP40) (Insulin-induced growth response protein CL-4) (Delayed-early protein HRS), transcript variant 19 (LOC490754), mRNA
    		• 490754
    		XM_862144     scaffold_20:14373619
    		   3
    42
  • 98% protein similarity to: tetraspanin 3 [Bos taurus]
    		•       scaffold_98:3179866
    		   3
    43
  • 95% protein similarity to: reticulon 3 isoform 4 [Mus musculus]
    		•       scaffold_42:4747718
    		   3
    44
  • Unidentified naz02d09
    		•       scaffold_15:31651017
    		   3
    45
  • 99% protein similarity to: KIAA0109 [Homo sapiens]
    		•       scaffold_7:49428837
    		   3
    46
  • Unidentified naz04a12
    		•       scaffold_119:1081724
    		   3
    47
  • 97% protein similarity to: metastatic lymph node 51 [Bos taurus]
    		•       scaffold_1:31140148
    scaffold_53:10688598     		  3
    48
  • 97% protein similarity to: lactate dehydrogenase A [synthetic construct]
    		•       scaffold_227:565034
    		   3
    49
  • 42% protein similarity to: rCG58239 [Rattus norvegicus]
    		•       scaffold_499:24464
    		   3
    50
  • 97% protein similarity to: PGK1 [Homo sapiens]
    		•       scaffold_26:18362752
    		   3
    51
  • 97% protein similarity to: Na+/K+ -ATPase alpha 3 subunit variant [Homo sapiens]
    		•       scaffold_80:4255359
    		   3
    52
  • 90% protein similarity to: SLC25A3 protein [Bos taurus]
    		•       scaffold_9:3589732
    		   3
    53
  • 95% protein similarity to: Pde6b protein [Mus musculus]
    		•       scaffold_73:5410653
    		   3
    54
  • 78% protein similarity to: E2-induced gene 5 protein homolog
    		•       scaffold_87:6753669
    		   3
    55
  • 94% protein similarity to: transmembrane emp24 protein transport domain containing 4 [Mus musculus]
    		•       scaffold_66:2513357
    		   3
    56
  • 68% protein similarity to: serine/threonine protein phosphatase with EF-hand motifs 2 [Homo sapiens]
    		•       scaffold_33:600739
    		   3
    57
  • 96% protein similarity to: ATP synthase, H+ transporting, mitochondrial F1 complex, beta subunit precursor [Homo sapiens]
    		•       scaffold_9:41594670
    		   3
    58
  • 96% protein similarity to: ribosomal protein L3 [Rattus norvegicus]
    		•       scaffold_28:23304106
    		   3
    59
  • 100% protein similarity to: ribosomal protein L10 [Rattus norvegicus]
    		•       scaffold_148:1551898
    		   3
    60
  • 93% protein similarity to: succinate-CoA ligase, GDP-forming, alpha subunit [Homo sapiens]
    		•       scaffold_37:5991147
    		   3
    61
  • Unidentified naz03c07
    		•       scaffold_12:34424302
    		   3
    62
  • 54% protein similarity to: truncated zinc finger protein isoform [Homo sapiens]
    		•       scaffold_52:8265665
    		   3
    63
  • 91% protein similarity to: heat shock protein [Aedes aegypti]
    		•       scaffold_111:2226127
    		   3
    64
  • Unidentified naz12f04
    		•       scaffold_123:3286000
    		   3
    65
  • 97% protein similarity to: vimentin [Bos taurus]
    		•       scaffold_120:1620628
    		   3
    66
  • 99% protein similarity to: Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
    		•       scaffold_148:1518849
    		   3
    67
  • 98% protein similarity to: Nedd4 WW domain-binding protein 5 [Mus musculus]
    		•       scaffold_6:4448255
    		   3
    68
  • 33% protein similarity to: procollagen, type VII, alpha 1 [Mus musculus]
    		•       scaffold_168:1858586
    		   3
    69
  • 85% protein similarity to: isopentenyl-diphosphate delta isomerase [Homo sapiens]
    		•       scaffold_16:9231632
    		   3
    70
  • PREDICTED: Ornithorhynchus anatinus similar to ADP-ribosylation factor-like 2-like 1 (LOC100084494), mRNA
    		• 100084494
    		XM_001514920     scaffold_34:21393069
    		   2
    71
  • PREDICTED: Bos taurus similar to profilin 2 (LOC539034), mRNA
    		• 539034
    		XM_001252022     scaffold_8:47303849
    		   2
    72
  • PREDICTED: Pan troglodytes hypothetical protein LOC748044 (LOC748044), mRNA
    		• 748044
    		XM_001172453     scaffold_53:903772
    		   2
    73
  • TPA_inf: Cavia porcellus prnp gene for prion protein PrP
    		•   BN000847     scaffold_8:20097365
    		   2
    74
  • Bos taurus abl interactor 2 (ABI2), mRNA
    		• 537711
    		NM_001101171     scaffold_13:37309592
    		   2
    75
  • Cavia porcellus succinate dehydrogenase complex subunit A (SDHA) mRNA, partial cds
    		•   DQ402978     scaffold_150:1986350
    		   2
    76
  • PREDICTED: Macaca mulatta similar to HESB like domain containing 2 (LOC720412), mRNA
    		• 720412
    		XR_014446     scaffold_11:15739919
    		   2
    77
  • Cavia porcellus inwardly-rectifying potassium channel Kir2.4 (KCNJ14) gene, complete cds
    		•   AF187875     scaffold_70:8698543
    		   2
    78
  • PREDICTED: Macaca mulatta similar to Ornithine decarboxylase antizyme (ODC-Az) (LOC721477), mRNA
    		• 721477
    		XM_001117645     scaffold_369:297227
    		   2
    79
  • 95% protein similarity to: Calmodulin-regulated spectrin-associated protein 1
    		•       scaffold_18:38651057
    		   2
    80
  • 87% protein similarity to: complement component 1, q subcomponent-like 1 [Homo sapiens]
    		•       scaffold_67:8993925
    		   2
    81
  • 79% protein similarity to: Ribosomal protein L14 [Mus musculus]
    		•       scaffold_7:43778965
    		   2
    82
  • 96% protein similarity to: calcium channel voltage-dependent alpha 1F subunit [Mus musculus]
    		•       scaffold_132:2448643
    		   2
    83
  • 78% protein similarity to: PREDICTED: hypothetical protein [Rattus norvegicus]
    		•       scaffold_30:10270337
    		   2
    84
  • 79% protein similarity to: Diacylglycerol O-acyltransferase 1 (Diglyceride acyltransferase)
    		•       scaffold_95:3439537
    		   2
    85
  • 93% protein similarity to: Integrin-alpha FG-GAP repeat-containing protein 2
    		•       scaffold_109:2328656
    		   2
    86
  • 98% protein similarity to: Homo sapiens olfactomedin 1 [synthetic construct]
    		•       scaffold_27:315309
    		   2
    87
  • 86% protein similarity to: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1 [Mus musculus]
    		•       scaffold_2:35863221
    		   2
    88
  • 96% protein similarity to: Neuroendocrine protein 7B2 precursor (Secretogranin-5) (Secretogranin V) (Secretory granule endocrine protein I) (Pituitary polypeptide) [Contains: N-terminal peptide; C-terminal peptide]
    		•       scaffold_10:20375107
    		   2
    89
  • 100% protein similarity to: Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic construct]
    		•       scaffold_15:34020372
    		   2
    90
  • 91% protein similarity to: TPA_exp: kinesin light chain 1B [Mus musculus]
    		•       scaffold_111:3189735
    		   2
    91
  • 94% protein similarity to: Glutamate decarboxylase-like protein 1
    		•       scaffold_0:66233300
    		   2
    92
  • 89% protein similarity to: protein tyrosine phosphatase-like A domain containing 1 [Bos taurus]
    		•       scaffold_101:1585005
    		   2
    93
  • 89% protein similarity to: cold-inducible RNA binding protein [Alligator mississippiensis]
    		•       scaffold_320:136217
    		   2
    94
  • 90% protein similarity to: ribosomal phosphoprotein large PO subunit [Sus scrofa]
    		•       scaffold_4:5345738
    		   2
    95
  • 73% protein similarity to: Beta-glucuronidase precursor
    		•       scaffold_66:3361292
    		   2
    96
  • Unidentified naz04a05
    		•       scaffold_321:38004
    		   2
    97
  • 97% protein similarity to: PREDICTED: similar to nudE nuclear distribution gene E homolog like 1 (A. nidulans) isoform B isoform 1 [Canis familiaris]
    		•       scaffold_61:7485708
    		   2
    98
  • Unidentified naz03h12
    		•       scaffold_15:18384302
    		   2
    99
  • 93% protein similarity to: Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS Crystal Structure
    		•       scaffold_23:29695006
    		   2
    100
  • 86% protein similarity to: TERF2IP protein [Homo sapiens]
    		•       scaffold_22:1713589
    		   2


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