NbLib0109: NEI guinea pig eye minus lens and retina unnormalized (nba)

Last GRIST date: 07/17/2008

In collaboration with the Oakland University Eye Research Institute, Rochester MI

View this library: Full List | Indexed by Chromosome | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display. View All Data | << Previous Page | Next Page >>
Group#Description Entrez Gene IdGenBankUniGene (Build Mm #175) Chromosomal Pos. (BLAT)ChromosomeNum. Clones
1
  • 94% protein similarity to: dermatan sulfate proteoglycan II [Equus caballus]
    		•       scaffold_9:9853795
    		   21
    2
  • PREDICTED: Bos taurus similar to elongation factor 1 alpha, transcript variant 3 (LOC785922), mRNA
    		• 785922
    		XM_001253080     scaffold_39:16953876
    scaffold_4:46684569
    		   14
    3
  • 74% protein similarity to: keratin 12 [Homo sapiens]
    		•       scaffold_53:11181788
    		   11
    4
  • Guinea pig mRNA for lipocortin-like protein 39K
    		•   X14635     scaffold_21:24549951
    		   10
    5
  • Cavia porcellus beta-transducin (Gnb1) mRNA, complete cds
    		•   EU257501     scaffold_186:761048
    		   9
    6
  • Cavia porcellus rhodopsin (Rho) mRNA, complete cds
    		•   EF457995     scaffold_109:2847064
    		   8
    7
  • 86% protein similarity to: Collagen alpha-2(I) chain precursor (Alpha-2 type I collagen)
    		•       scaffold_11:25867655
    		   8
    8
  • PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 3 (LOC608748), mRNA
    		• 608748
    		XM_859142     scaffold_7:28470945
    		   6
    9
  • 95% protein similarity to: secreted protein, acidic, cysteine-rich [Sus scrofa]
    		•       scaffold_81:3932478
    		   6
    10
  • PREDICTED: Canis familiaris similar to glyceraldehyde-3-phosphate dehydrogenase (LOC488411), mRNA
    		• 488411
    		XM_847161     scaffold_107:692396
    scaffold_98:2234755
    		   5
    11
  • Bos taurus Y box binding protein 1 (YBX1), mRNA
    		• 287023
    		NM_174815     scaffold_133:1964160
    		   5
    12
  • apoD=RNA type 38 [guinea pigs, adrenal gland, mRNA, 994 nt]
    		•   S79402     scaffold_7:58956003
    		   5
    13
  • 78% protein similarity to: prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) [Homo sapiens]
    		•       scaffold_15:20956226
    		   5
    14
  • 97% protein similarity to: RPL7 protein [Homo sapiens]
    		•       scaffold_0:39740022
    		   5
    15
  • 97% protein similarity to: Apolipoprotein E precursor (Apo-E)
    		•       scaffold_80:5360091
    		   5
    16
  • 93% protein similarity to: DEP domain containing 5 isoform 1 (predicted) [Callithrix jacchus]
    		•       scaffold_103:273781
    		   5
    17
  • 95% protein similarity to: retinal pigment epithelium-specific protein 65kDa [Bos taurus]
    		•       scaffold_2:65515626
    		   5
    18
  • Synthetic construct Homo sapiens clone IMAGE:100015639, MGC:183140 phosducin (PDC) mRNA, encodes complete protein
    		• 5132
    		BC148616     scaffold_12:34436552
    		   4
    19
  • Pan troglodytes aldolase C, fructose-bisphosphate (ALDOC), mRNA
    		• 493951
    		NM_001009147     scaffold_32:23888497
    		   4
    20
  • 78% protein similarity to: Ribosomal protein L14 [Mus musculus]
    		•       scaffold_7:43778949
    		   4
    21
  • 95% protein similarity to: Creatine kinase B-type (Creatine kinase B chain) (B-CK)
    		•       scaffold_111:3086854
    		   4
    22
  • 90% protein similarity to: AE binding protein 1 (predicted) [Rattus norvegicus]
    		•       scaffold_66:2864199
    		   4
    23
  • 81% protein similarity to: CD9 antigen (27 kDa diphtheria toxin receptor-associated protein) (DRAP27)
    		•       scaffold_107:4172740
    		   4
    24
  • 87% protein similarity to: Homo sapiens aldehyde dehydrogenase 3 family, memberA1 [synthetic construct]
    		•       scaffold_71:689828
    		   4
    25
  • 97% protein similarity to: TMSB4X protein [Homo sapiens]
    		•       scaffold_116:331322
    		   4
    26
  • PREDICTED: Equus caballus similar to Elongation factor 2 (EF-2) (LOC100061437), misc RNA
    		• 100061437
    		XR_036447     scaffold_304:241487
    		   3
    27
  • Cavia porcellus leucine zipper transcription factor (NRL) mRNA, complete cds
    		•   EU477759     scaffold_13:16749198
    		   3
    28
  • PREDICTED: Macaca mulatta similar to Tropomyosin alpha-4 chain (Tropomyosin-4) (TM-4) (LOC723208), partial mRNA
    		• 723208
    		XM_001119268     scaffold_86:6859606
    		   3
    29
  • Cavia sp. mRNA for amyloid precursor protein
    		•   X97631     scaffold_52:7574693
    		   3
    30
  • Cavia porcellus beta actin mRNA, complete cds
    		•   AF508792     scaffold_30:10929892
    		   3
    31
  • PREDICTED: Canis familiaris similar to methyl-CpG binding domain protein 6, transcript variant 3 (LOC481127), mRNA
    		• 481127
    		XM_844633     scaffold_3:69423451
    scaffold_9:40281024
    		   3
    32
  • Cavia cobaya mRNA for ubiquitin extention protein, complete cds
    		•   D83209     scaffold_48:9379563
    		   3
    33
  • Bos taurus DAZ associated protein 2 (DAZAP2), mRNA
    		• 540286
    		NM_001034701     scaffold_9:48437443
    		   3
    34
  • Cavia porcellus S-antigen (Sag) mRNA, complete cds
    		•   EF457996     scaffold_13:28673156
    		   3
    35
  • Cavia porcellus beta2 microglobulin mRNA, complete cds
    		•   AF148875     scaffold_10:29993000
    		   3
    36
  • Cavia porcellus mRNA for ferritin heavy chain, complete cds
    		•   AB073371     scaffold_65:9448244
    		   3
    37
  • Cavia porcellus pro-alpha-1 type 1 collagen mRNA, partial cds
    		•   AF169346     scaffold_53:7475008
    		   3
    38
  • PREDICTED: Pan troglodytes similar to DDX5 protein (DDX5), mRNA
    		• 455267
    		XR_023329     scaffold_65:5520240
    		   3
    39
  • 100% protein similarity to: Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State
    		•       scaffold_19:25400700
    		   3
    40
  • 98% protein similarity to: transgelin [Bos taurus]
    		•       scaffold_19:30747770
    		   3
    41
  • 92% protein similarity to: proline-rich nuclear receptor coactivator 2 [Bos taurus]
    		•       scaffold_25:11703946
    		   3
    42
  • 97% protein similarity to: RPL13A protein [Homo sapiens]
    		•       scaffold_70:8010495
    		   3
    43
  • 100% protein similarity to: heat shock protein 90kDa alpha (cytosolic), class A member 1 isoform 1 [Homo sapiens]
    		•       scaffold_111:2226185
    		   3
    44
  • 90% protein similarity to: prostatic binding protein [Homo sapiens]
    		•       scaffold_4:3463841
    		   3
    45
  • 84% protein similarity to: angiopoietin-like 7 [Homo sapiens]
    		•       scaffold_25:22968530
    		   3
    46
  • 89% protein similarity to: keratocan [Bos taurus]
    		•       scaffold_9:9960192
    		   3
    47
  • 100% protein similarity to: ribosomal protein S20 [synthetic construct]
    		•       scaffold_64:1764796
    		   3
    48
  • 97% protein similarity to: alpha 1 type I collagen [Canis lupus familiaris]
    		•       scaffold_53:7469045
    		   3
    49
  • Unidentified nba08b09
    		•       scaffold_3088:1608
    		   3
    50
  • 92% protein similarity to: CD81 protein
    		•       scaffold_42:12116401
    		   3
    51
  • 94% protein similarity to: splicing factor, arginine/serine-rich 2 [Mus musculus]
    		•       scaffold_76:2212669
    		   3
    52
  • 53% protein similarity to: truncated epidermal growth factor (beta-urogastrone) [Homo sapiens]
    		•       scaffold_43:9194310
    		   3
    53
  • 99% protein similarity to: ribosomal protein L5 variant [Homo sapiens]
    		•       scaffold_2:18645528
    		   3
    54
  • 59% protein similarity to: CREBBP/EP300 inhibitor 1 [Homo sapiens]
    		•       scaffold_23:27393771
    		   3
    55
  • 72% protein similarity to: Prostaglandin-H2 D-isomerase precursor (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS)
    		•       scaffold_18:38334366
    		   3
    56
  • 98% protein similarity to: WSB1 protein [Homo sapiens]
    		•       scaffold_32:25224354
    		   3
    57
  • 67% protein similarity to: serpin [Equus caballus]
    		•       scaffold_286:351475
    		   3
    58
  • 100% protein similarity to: actin gamma 1 [synthetic construct]
    		•       scaffold_76:6016390
    		   3
    59
  • 96% protein similarity to: ribosomal protein S2 [Mus musculus]
    		•       scaffold_4:22049570
    		   3
    60
  • 98% protein similarity to: serum/glucocorticoid regulated kinase [synthetic construct]
    		•       scaffold_41:13951335
    		   3
    61
  • 88% protein similarity to: keratin 3 [Homo sapiens]
    		•       scaffold_9:46983412
    		   3
    62
  • 97% protein similarity to: thrombospondin-1 precursor [synthetic construct]
    		•       scaffold_10:25223194
    		   3
    63
  • 99% protein similarity to: ribosomal protein L21 [Homo sapiens]
    		•       scaffold_1:48587562
    scaffold_62:5651835     		  3
    64
  • 94% protein similarity to: TALDO1 protein [Homo sapiens]
    		•       scaffold_218:192073
    		   3
    65
  • 98% protein similarity to: ribosomal protein S15 [Homo sapiens]
    		•       scaffold_320:252214
    		   3
    66
  • 99% protein similarity to: Probable ATP-dependent RNA helicase DDX5 (DEAD box protein 5)
    		•       scaffold_65:5523786
    		   3
    67
  • 100% protein similarity to: Chain A, Crystal Structure Of The Human Laminin Receptor Precursor
    		•       scaffold_7:43283890
    		   3
    68
  • Murine gene for U1RNA-associated 70-kDa protein, AA 336-343
    		• 20637
    		X15773     scaffold_70:8270891
    		   2
    69
  • Cavia porcellus mRNA for glyceraldehyde 3-phosphate dehydrogenase, partial cds
    		•   AB060340     scaffold_98:2234804
    		   2
    70
  • PREDICTED: Macaca mulatta similar to calmodulin 1, transcript variant 5 (LOC715270), mRNA
    		• 715270
    		XM_001113516     scaffold_18:30987475
    		   2
    71
  • PREDICTED: Pan troglodytes similar to histone deacetylase, transcript variant 3 (LOC464259), mRNA
    		• 464259
    		XM_001162202     scaffold_25:4911438
    		   2
    72
  • PREDICTED: Equus caballus similar to HNRPC protein, transcript variant 1 (LOC100059269), mRNA
    		• 100059269
    		XM_001505154     scaffold_13:20652232
    		   2
    73
  • Cavia porcellus GEC-1 (gec-1) mRNA, complete cds
    		•   AF012920     scaffold_28:4357727
    		   2
    74
  • Cavia porcellus alpha-enolase (Eno1) mRNA, complete cds
    		•   EU306867     scaffold_25:24437458
    		   2
    75
  • Cavia porcellus pro-alpha-1 type 3 collagen mRNA, partial cds
    		•   AF169348     scaffold_3:3194415
    		   2
    76
  • M.musculus Srp20 gene
    		• 20383
    		X91656     scaffold_15:34020293
    		   2
    77
  • Rattus norvegicus similar to Small EDRK-rich factor 2 (4F5rel) (LOC502663), mRNA
    		• 502663
    		NM_001098782     scaffold_10:29093381
    		   2
    78
  • PREDICTED: Pan troglodytes similar to MHC class I antigen (LOC741854), mRNA
    		• 741854
    		XM_001144668         2
    79
  • Cavia porcellus metalloproteinase inhibitor TIMP-2 mRNA, complete cds
    		•   AF127803     scaffold_76:3835755
    		   2
    80
  • Cavia porcellus TPT1 (TPT1) mRNA, complete cds
    		•   EU330893     scaffold_6:55557364
    		   2
    81
  • PREDICTED: Canis familiaris similar to H3 histone, family 3B, transcript variant 3 (LOC475916), mRNA
    		• 475916
    		XM_853672     scaffold_193:311793
    		   2
    82
  • Rattus norvegicus prothymosin alpha (Ptma), mRNA
    		• 29222
    		NM_021740     scaffold_13:29732561
    		   2
    83
  • PREDICTED: Canis familiaris similar to chaperonin subunit 7 (eta), transcript variant 7 (LOC610226), mRNA
    		• 610226
    		XM_861481     scaffold_37:15821581
    		   2
    84
  • Equus caballus lumican (LUM), mRNA
    		• 100009681
    		NM_001081780     scaffold_9:9915030
    		   2
    85
  • C.cobaya (NIH) ocp-2 mRNA
    		•   Z35481     scaffold_3:46046530
    scaffold_81:3151452     		  2
    86
  • Sus scrofa F-actin capping protein beta subunit (Capzb) gene, complete cds
    		• 100134958
    		EF202989     scaffold_25:15681961
    		   2
    87
  • 97% protein similarity to: TDE2 [Homo sapiens]
    		•       scaffold_1:77875225
    		   2
    88
  • 98% protein similarity to: vimentin [Rattus norvegicus]
    		•       scaffold_120:1614892
    		   2
    89
  • 91% protein similarity to: Aquaporin-1 (AQP-1) (Aquaporin-CHIP) (Water channel protein for red blood cells and kidney proximal tubule)
    		•       scaffold_44:7195003
    		   2
    90
  • 95% protein similarity to: proteasome maturation protein [Bos taurus]
    		•       scaffold_6:30230724
    		   2
    91
  • 90% protein similarity to: DnaJ (Hsp40) homolog, subfamily C, member 7 variant [Homo sapiens]
    		•       scaffold_53:12007836
    		   2
    92
  • 100% protein similarity to: ADP-ribosylation factor 1 [Homo sapiens]
    		•       scaffold_6:328889
    		   2
    93
  • 73% protein similarity to: echinoderm microtubule associated protein like 3 [Bos taurus]
    		•       scaffold_44:15134911
    		   2
    94
  • 100% protein similarity to: ribosomal protein L10 [Rattus norvegicus]
    		•       scaffold_148:1551947
    		   2
    95
  • 95% protein similarity to: Homo sapiens cyclin G1 [synthetic construct]
    		•       scaffold_17:9982553
    		   2
    96
  • 94% protein similarity to: thioredoxin [Macaca mulatta]
    		•       scaffold_89:1174684
    scaffold_93:2518744     		  2
    97
  • 100% protein similarity to: H3 histone, family 3A [Homo sapiens]
    		•       scaffold_137:2632666
    		   2
    98
  • 98% protein similarity to: eukaryotic translation initiation factor 3 subunit 6 [synthetic construct]
    		•       scaffold_0:1032027
    		   2
    99
  • 95% protein similarity to: ankyrin repeat and SOCS box-containing protein 11 isoform b [Homo sapiens]
    		•       scaffold_113:2145404
    		   2
    100
  • 83% protein similarity to: aquaporin 1 splice variant 2 [Homo sapiens]
    		•       scaffold_44:7205469
    		   2


    << Previous Page | Next Page >>
    1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28