NbLib0101: dbEST medaka whole eye unnormalized (olaeye01)

Last GRIST date: 12/02/2008

This library includes the following UniGene libs: Lib.8769.
View this library: Full List | Indexed by Chromosome | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display. View All Data | << Previous Page | Next Page >>
Group#Description Entrez Gene IdGenBankUniGene (Build Ola #21) ChromosomeNum. Clones
1
  • Oryzias latipes mitochondrial cytb gene for cytochrome b, partial cds, haplotype:B27-Odawara
  • Transcribed locus, strongly similar to XP_001004419.1 PREDICTED: similar to 40S ribosomal protein S4, X isoform isoform 2 [Mus musculus]
    		•   AB084731   15391  
    		   130
    2
  • Oryzias latipes KFH-Rh protein (kfh-rh), mRNA
  • KFH-Rh protein
    		• 100049259
    		NM_001104695   4482  
    		   24
    3
  • Transcribed locus, moderately similar to NP_001002581.2 hypothetical protein LOC436854 [Danio rerio]
    		•     14056  
    		   24
    4
  • Transcribed locus
    		•     7121  
    		   20
    5
  • Transcribed locus, strongly similar to NP_957079.1 hypothetical protein LOC393758 [Danio rerio]
    		•     5243  
    		   19
    6
  • Oryzias latipes nppc3 and nppb genes for C-type natriuretic peptide-3 precursor, B-type natriuretic peptide precursor, complete cds
  • Transcribed locus
    		•   AB207138   1532 [**] 
    		   16
    7
  • Oryzias latipes OlGC2 gene for membrane guanylyl cyclase OlGC2, complete cds
    		•   AB054296       15
    8
  • Oryzias latipes SW1 retrotransposon SW1Ol13 reverse transcriptase pseudogene, complete sequence; and unknown gene
  • Transcribed locus
    		•   AF055642   10041  
    		   12
    9
  • Oryzias latipes gonadotropin-releasing hormone receptor 2 (gnrh-r2), mRNA
  • Transcribed locus
  • Transcribed locus, weakly similar to XP_001185024.1 PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus]
    		• 100125528
    		NM_001104922   5921  
    9597  
    		   11
    10
  • Transcribed locus, moderately similar to NP_001002584.1 hypothetical protein LOC436857 [Danio rerio]
    		•     16055  
    		   10
    11
  • Unidentified AU243311
    		•         10
    12
  • Transcribed locus, strongly similar to NP_957079.1 hypothetical protein LOC393758 [Danio rerio]
    		•     6437  
    		   9
    13
  • 100% protein similarity to: kininogen 1 isoform 1 [Mus musculus]
    		•         9
    14
  • Transcribed locus, weakly similar to NP_001019594.1 hypothetical protein LOC554128 [Danio rerio]
    		•     10044  
    		   8
    15
  • Unidentified AU242947
    		•         8
    16
  • Transcribed locus, weakly similar to NP_001019594.1 hypothetical protein LOC554128 [Danio rerio]
  • Transcribed locus, weakly similar to XP_686430.1 PREDICTED: similar to gammaSc-crystallin [Danio rerio]
    		•     10052 [**] 
    18189 [**] 
    		   7
    17
  • 96% protein similarity to: ribosomal protein S21 [Solea senegalensis]
    		•         7
    18
  • Oryzias latipes DNA, globin gene cluster region
    		•   AB083077       6
    19
  • Transcribed locus, moderately similar to NP_001013294.1 crystallin, gamma S1 [Danio rerio]
    		•     8857  
    		   6
    20
  • Cyprinus carpio clone cL41a ribosomal protein L41 mRNA, complete cds
    		•   AY117540       5
    21
  • Transcribed locus, moderately similar to XP_707243.1 PREDICTED: similar to guanine nucleotide binding protein (G protein), gamma 1 subunit isoform 2 [Danio rerio]
    		•     6516  
    		   5
    22
  • 75% protein similarity to: G-protein gamma subunit 8 [Cyprinus carpio]
    		•         5
    23
  • Unidentified AU180583
    		•         5
    24
  • 95% protein similarity to: ribosomal protein L37 [Solea senegalensis]
    		•         5
    25
  • Oryzias latipes arrestin (kfharr-r1), mRNA
  • Arrestin
    		• 100125808
    		NM_001105089   84  
    		   4
    26
  • Escherichia coli transposon gamma delta tnpA, tnpR and tnpX genes for transposase, resolvase and ORF, complete cds
    		•   D16449       4
    27
  • Transcribed locus, moderately similar to XP_699928.2 PREDICTED: similar to LOC495197 protein [Danio rerio]
    		•     12648  
    		   4
    28
  • Transcribed locus, moderately similar to XP_001338643.1 PREDICTED: beta B3-crystallin [Danio rerio]
    		•     9586  
    		   4
    29
  • Transcribed locus, moderately similar to NP_004067.1 crystallin, beta B3 [Homo sapiens]
    		•     10045  
    		   4
    30
  • Transcribed locus, strongly similar to NP_001018135.1 hypothetical protein LOC553178 [Danio rerio]
    		•     16056  
    		   4
    31
  • Unidentified AU180374
    		•         4
    32
  • 68% protein similarity to: cytokeratin [Stizostedion vitreum vitreum]
    		•         4
    33
  • 87% protein similarity to: crystallin, beta A1 [Danio rerio]
    		•         4
    34
  • Unidentified AU180887
    		•         4
    35
  • Oryzias latipes 40S ribosomal protein S24 (rps24), mRNA
  • 40S ribosomal protein S24
    		• 100049365
    		NM_001104763   6028 [**] 
    		   3
    36
  • Oryzias latipes alcohol dehydrogenase Class VI (adh8), mRNA
  • Alcohol dehydrogenase Class VI
    		• 100049415
    		NM_001104796   16023  
    		   3
    37
  • Transcribed locus
    		•     10854  
    		   3
    38
  • Transcribed locus, strongly similar to XP_700044.1 PREDICTED: similar to serum/glucocorticoid regulated kinase [Danio rerio]
    		•     7273  
    		   3
    39
  • Transcribed locus
    		•     5244  
    		   3
    40
  • Transcribed locus, strongly similar to XP_978818.1 PREDICTED: similar to 40S ribosomal protein S29 [Mus musculus]
    		•     5375  
    		   3
    41
  • Unidentified AU180384
    		•         3
    42
  • 45% protein similarity to: PREDICTED: hypothetical protein [Danio rerio]
    		•         3
    43
  • Unidentified AU180742
    		•         3
    44
  • 90% protein similarity to: 60S ribosomal protein L5 [Platichthys flesus]
    		•         3
    45
  • 70% protein similarity to: ubiquinol-cytochrome c reductase, complex III subunit VII [Danio rerio]
    		•         3
    46
  • 98% protein similarity to: COG2200: FOG: EAL domain [Escherichia coli B171]
    		•         3
    47
  • 99% protein similarity to: casein kinase 1, alpha 1 [Danio rerio]
    		•         3
    48
  • 96% protein similarity to: adenine nucleotide translocator s6 [Takifugu rubripes]
    		•         3
    49
  • 92% protein similarity to: ribosomal protein L36 [Oncorhynchus masou formosanus]
    		•         3
    50
  • 93% protein similarity to: 60S ribosomal protein L28 [Platichthys flesus]
    		•         3
    51
  • 79% protein similarity to: crystallin, gamma MX [Danio rerio]
    		•         3
    52
  • 69% protein similarity to: prostaglandin D2 synthase [Danio rerio]
    		•         3
    53
  • Unidentified AU180902
    		•         3
    54
  • 97% protein similarity to: 40S ribosomal protein S4 [Pagrus major]
    		•         3
    55
  • Unidentified AU244415
    		•         3
    56
  • 99% protein similarity to: 40S ribosomal protein S20 [Ictalurus punctatus]
    		•         3
    57
  • Unidentified AU180669
    		•         3
    58
  • Oryzias latipes arrestin (kfharr-r2), mRNA
    		• 100144345
    		NM_001122901       2
    59
  • Oryzias latipes annexin max4 (anxa11), mRNA
  • Annexin max4
    		• 100049456
    		NM_001104826   64  
    		   2
    60
  • Oryzias latipes annexin max3 (anxa1), mRNA
  • Annexin max3
    		• 100049455
    		NM_001104825   5027  
    		   2
    61
  • Oryzias latipes Rex6 retrotransposon partial en pseudogene for endonuclease, clone Rex6-Ola-1
    		•   AJ293518       2
    62
  • Oryzias latipes gene for membrane guanylyl cyclase OlGC7, complete cds
    		• 100125819
    		AB054293       2
    63
  • Transcribed locus, moderately similar to NP_115657.2 ELAV-like protein 3 isoform 2 [Homo sapiens]
    		•     10040  
    		   2
    64
  • Transcribed locus, weakly similar to XP_686430.1 PREDICTED: similar to gammaSc-crystallin [Danio rerio]
  • Transcribed locus, weakly similar to NP_001019594.1 hypothetical protein LOC554128 [Danio rerio]
    		•     10052 [**] 
    18189 [**] 
    		   2
    65
  • Transcribed locus
    		•     8242  
    9177  
    		   2
    66
  • Transcribed locus, moderately similar to XP_984743.1 PREDICTED: similar to Six-transmembrane epithelial antigen of prostate 2 isoform 2 [Mus musculus]
    		•     7187  
    		   2
    67
  • Transcribed locus
    		•     6125  
    		   2
    68
  • Transcribed locus
    		•     3669  
    		   2
    69
  • Transcribed locus
    		•     6553  
    		   2
    70
  • Transcribed locus
    		•     14055  
    		   2
    71
  • Transcribed locus, strongly similar to XP_999729.1 PREDICTED: similar to ribosomal protein L15 [Mus musculus]
    		•     15538  
    		   2
    72
  • Transcribed locus
    		•     13770  
    		   2
    73
  • Transcribed locus, moderately similar to XP_995671.1 PREDICTED: similar to ribosomal protein L15 [Mus musculus]
    		•     16062  
    		   2
    74
  • Transcribed locus, moderately similar to XP_986540.1 PREDICTED: similar to 60S ribosomal protein L6 (TAX-responsive enhancer element binding protein 107) (TAXREB107) [Mus musculus]
    		•     15494  
    		   2
    75
  • 77% protein similarity to: PREDICTED: similar to pol polyprotein [Danio rerio] (Similar to EST: AU243398)
    		•   AU243398       2
    76
  • Similar to EST: AU180411
    		•   AU180411       2
    77
  • Similar to EST: AU180402
    		•   AU180402       2
    78
  • Similar to EST: AU180483
    		•   AU180483       2
    79
  • Similar to EST: AU243278
    		•   AU243278       2
    80
  • Similar to EST: AU243625
    		•   AU243625       2
    81
  • 96% protein similarity to: 3-hydroxyisobutyrate dehydrogenase [Astatotilapia burtoni] (Similar to EST: AU180508)
    		•   AU180508       2
    82
  • Similar to EST: AU180416
    		•   AU180416       2
    83
  • Unidentified AU180229
    		•         2
    84
  • Unidentified AU180244
    		•         2
    85
  • Unidentified AU180245
    		•         2
    86
  • 93% protein similarity to: ribosomal protein L13 [Danio rerio]
    		•         2
    87
  • Unidentified AU243501
    		•         2
    88
  • Unidentified AU243482
    		•         2
    89
  • 80% protein similarity to: betaine-homocysteine methyltransferase [Danio rerio]
    		•         2
    90
  • Unidentified AU243375
    		•         2
    91
  • Unidentified AU243374
    		•         2
    92
  • Unidentified AU243372
    		•         2
    93
  • 35% protein similarity to: PREDICTED: similar to extracellular matrix protein QBRICK [Danio rerio]
    		•         2
    94
  • Unidentified AU243361
    		•         2
    95
  • 51% protein similarity to: Cystatin precursor
    		•         2
    96
  • Unidentified AU244470
    		•         2
    97
  • Unidentified AU244469
    		•         2
    98
  • 77% protein similarity to: CWF19-like 1, cell cycle control [Danio rerio]
    		•         2
    99
  • Unidentified AU244461
    		•         2
    100
  • Unidentified AU244460
    		•         2


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