NbLib0100: dbEST zebrafish retina unnormalized (drret01)

Last GRIST date: 12/02/2008

This library includes the following UniGene libs: Lib.4264.
View this library: Full List | Indexed by Chromosomal Position | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display. View All Data | << Previous Page | Next Page >>
Group#Description Entrez Gene IdGenBankUniGene (Build Dr #114) Chromosomal Pos. (BLAT)Num. Clones
1
  • Danio rerio rhodopsin (rho), mRNA
  • Rhodopsin
    		• 30295
    		NM_131084   354 [**] 
    		   1464
    2
  • Danio rerio mitochondrial genome, complete sequence
    		• 140512
    140519
    140520
    140531
    140532
    140533
    140534
    140535
    140536
    140538
    140539
    140540
    140541
    		AC024175       905
    3
  • Danio rerio zgc:73310 (zgc:73310), mRNA
  • Zgc:73310
  • Zgc:73310
    		• 393758
    		NM_200785   115522 [**] 
    132971 [**] 
    		   464
    4
  • Danio rerio creatine kinase, brain (ckb), mRNA
  • Creatine kinase, brain
    		• 140744
    		NM_173222   75625 [**] 
    		   204
    5
  • Danio rerio zgc:85811 (zgc:85811), mRNA
  • Zgc:85811
  • Transcribed locus, strongly similar to NP_059337.1 cytochrome c oxidase subunit III [Danio rerio]
    		• 406573
    		NM_213284   105009 [**] 
    33295  
    		   159
    6
  • Danio rerio guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 (gnat1), mRNA
  • Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
    		• 140428
    		NM_131868   32527  
    		   150
    7
  • Danio rerio opsin 1 (cone pigments), short-wave-sensitive 1 (opn1sw1), mRNA
  • Opsin 1 (cone pigments), short-wave-sensitive 1
    		• 30582
    		NM_131319   8194  
    		   105
    8
  • Danio rerio retinol binding protein 4, like (rbp4l), mRNA
  • Retinol binding protein 4, like
  • Transcribed locus, strongly similar to NP_956259.1 retinol binding protein 4, like [Danio rerio]
    		• 335651
    		NM_199965   119793  
    119811  
    		   102
    9
  • Danio rerio zgc:73359 (zgc:73359), mRNA
  • Zgc:73359
    		• 393810
    		NM_200837   81929  
    		   98
    10
  • Danio rerio glyceraldehyde-3-phosphate dehydrogenase, spermatogenic (gapdhs), mRNA
  • Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
    		• 406367
    		NM_213094   75409  
    		   98
    11
  • Danio rerio es1 protein (es1), mRNA
  • Es1 protein
    		• 30237
    		NM_131039   1461  
    		   96
    12
  • Danio rerio solute carrier family 25 alpha, member 5 (slc25a5), nuclear gene encoding mitochondrial protein, mRNA
  • Solute carrier family 25 alpha, member 5
    		• 192321
    		NM_173247   30295  
    		   91
    13
  • Danio rerio guanine nucleotide binding protein (G protein), beta polypeptide 3 (gnb3), mRNA
  • Guanine nucleotide binding protein (G protein), beta polypeptide 3
    		• 406483
    		NM_213202   144546 [**] 
    		   83
    14
  • Danio rerio bactin2 (bactin2), mRNA
  • Bactin2
    		• 57935
    		NM_181601   75125  
    		   73
    15
  • PREDICTED: Danio rerio similar to Gngt2 protein (LOC797361), mRNA
  • Wu:fk54a10
    		•   XM_001333094   81960 [**] 
    		   68
    16
  • Danio rerio aldolase c, fructose-bisphosphate (aldoc), mRNA
  • Aldolase c, fructose-bisphosphate
    		• 369193
    		NM_194384   19223  
    		   59
    17
  • Danio rerio phosphodiesterase 6G, cGMP-specific, rod, gamma (pde6g), mRNA
  • Phosphodiesterase 6G, cGMP-specific, rod, gamma
  • Phosphodiesterase 6G, cGMP-specific, rod, gamma
    		• 373876
    		NM_212799   117353  
    9829  
    		   54
    18
  • Danio rerio opsin 1 (cone pigments), long-wave-sensitive, 1 (opn1lw1), mRNA
  • Opsin 1 (cone pigments), long-wave-sensitive, 2
  • Opsin 1 (cone pigments), long-wave-sensitive, 1
    		• 30413
    		NM_131175   116975  
    81279 [**] 
    		   48
    19
  • Danio rerio guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 (gngt1), mRNA
  • Transcribed locus, strongly similar to NP_956261.1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Danio rerio]
  • Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
    		• 335656
    		NM_199967   142139  
    81940  
    		   47
    20
  • Danio rerio guanine nucleotide binding protein (G protein), beta polypeptide 1 (gnb1), mRNA
  • Guanine nucleotide binding protein (G protein), beta polypeptide 1
    		• 322104
    		NM_212609   75526  
    		   42
    21
  • Danio rerio recoverin (rcv1), mRNA
  • Hypothetical LOC792025
    		• 335650
    		NM_199964   9871  
    		   40
    22
  • Danio rerio N-myc downstream regulated gene 1, like (ndrg1l), mRNA
  • N-myc downstream regulated gene 1, like
    		• 393665
    		NM_200692   8090  
    		   36
    23
  • Danio rerio guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 (gnat2), mRNA
  • Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
    		• 140429
    		NM_131869   81958 [**] 
    		   32
    24
  • Danio rerio lactate dehydrogenase B4 (ldhb), mRNA
  • Lactate dehydrogenase B4
    		• 30497
    		NM_131247   75894  
    		   32
    25
  • Danio rerio apolipoprotein Eb (apoeb), mRNA
  • Apolipoprotein Eb
    		• 30314
    		NM_131098   23502  
    		   32
    26
  • Danio rerio zgc:154030 (zgc:154030), mRNA
  • Transcribed locus
  • Si:ch211-195b13.1
    		• 768159
    		NM_001077302   122648  
    9896  
    		   31
    27
  • Danio rerio tubulin, alpha 1 (tuba1), mRNA
  • Similar to alpha-tubulin isotype M-alpha-2
  • Similar to alpha-tubulin isotype M-alpha-2
    		• 373080
    		NM_194388   11310  
    120425  
    		   30
    28
  • Danio rerio opsin 1 (cone pigments), medium-wave-sensitive, 2 (opn1mw2), mRNA
  • Opsin 1 (cone pigments), medium-wave-sensitive, 2
    		• 360151
    		NM_182891   9850  
    		   30
    29
  • Danio rerio inositol hexaphosphate kinase 2 (ihpk2), mRNA
  • Inositol hexaphosphate kinase 2
    		• 322041
    		NM_201470   76762 [**] 
    		   29
    30
  • Danio rerio calmodulin 2b, (phosphorylase kinase, delta) (calm2b), mRNA
  • Calmodulin 2b, (phosphorylase kinase, delta)
    		• 192322
    		NM_214736   76014 [**] 
    		   28
    31
  • Danio rerio zgc:165530 (zgc:165530), mRNA
  • Prothymosin, alpha b
    		• 559194
    		NM_001098730   48738  
    		   28
    32
  • Danio rerio zgc:56548 (zgc:56548), mRNA
  • Zgc:56548
    		• 393989
    		NM_201014   9906  
    		   27
    33
  • PREDICTED: Danio rerio hypothetical LOC564090 (LOC564090), mRNA
  • Zgc:193593
  • Transcribed locus, strongly similar to NP_001122189.1 hypothetical protein LOC564090 [Danio rerio]
    		• 564090
    		XM_687445   118748  
    120139  
    		   25
    34
  • PREDICTED: Danio rerio hypothetical protein LOC100002099 (LOC100002099), mRNA
  • Hypothetical LOC100002099
    		• 100002099
    		XM_001341932   11303 [**] 
    		   25
    35
  • Danio rerio eukaryotic translation initiation factor 1B (eif1b), mRNA
  • Eukaryotic translation initiation factor 1B
    		• 322237
    		NM_199588   75862  
    		   25
    36
  • Danio rerio ribosomal protein, large, P0 (rplp0), mRNA
  • Ribosomal protein, large, P0
    		• 58101
    		NM_131580   55617  
    		   24
    37
  • Danio rerio phosphodiesterase 6C, cGMP-specific, cone, alpha prime (pde6c), mRNA
  • Phosphodiesterase 6C, cGMP-specific, cone, alpha prime
    		• 393845
    		NM_200871   117127  
    		   23
    38
  • Danio rerio ribosomal protein S4, X-linked (rps4x), mRNA
  • Ribosomal protein S4, X-linked
    		• 449547
    		NM_001005589   26403  
    		   23
    39
  • Danio rerio translationally controlled tumor protein (tctp), mRNA
  • Similar to Translationally-controlled tumor protein (TCTP)
  • Translationally controlled tumor protein
    		• 30723
    		NM_198140   116170 [**] 
    75674 [**] 
    		   22
    40
  • PREDICTED: Danio rerio phosducin 1 (pdc1), mRNA
  • Phosducin 1
    		• 386613
    		XM_677731   81948 [**] 
    		   22
    41
  • Danio rerio elongation factor 1-alpha (ef1a), mRNA
  • Elongation factor 1-alpha
  • Protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
    		• 30516
    		NM_131263   31797  
    82652  
    		   22
    42
  • Danio rerio enolase 1, (alpha) (eno1), mRNA
  • Enolase 1, (alpha)
    		• 334116
    		NM_212722   4724  
    		   21
    43
  • Danio rerio voltage-dependent anion channel 1 (vdac1), mRNA
  • Transcribed locus, strongly similar to NP_001001404.1 Voltage-dependent anion channel 1 [Danio rerio]
  • Voltage-dependent anion channel 1
    		• 334582
    		NM_001001404   132832 [**] 
    774 [**] 
    		   21
    44
  • Danio rerio zgc:111961 (zgc:111961), mRNA
  • Zgc:111961
    		• 554135
    		NM_001024429   35072  
    		   21
    45
  • Danio rerio guanylate cyclase activator 1B (guca1b), mRNA
  • Guanylate cyclase activator 1B
    		• 140431
    		NM_131871   82657  
    		   21
    46
  • Danio rerio opsin 1 (cone pigments), short-wave-sensitive 2 (opn1sw2), mRNA
  • Transcribed locus, strongly similar to NP_571267.1 opsin 1 (cone pigments), short-wave-sensitive 2 [Danio rerio]
    		• 30435
    		NM_131192   116974  
    		   21
    47
  • Danio rerio, Similar to RIKEN cDNA 1010001J12 gene, clone IMAGE:3814939, mRNA
  • Transcribed locus, strongly similar to NP_055278.1 Lsm3 protein [Homo sapiens]
    		•   BC044441   75123  
    		   20
    48
  • PREDICTED: Danio rerio similar to gefiltin (LOC555251), mRNA
  • Similar to gefiltin
    		• 555251
    		XM_677718   82634  
    		   20
    49
  • Danio rerio im:6892314 (im:6892314), mRNA
  • Zgc:172187
    		• 550134
    		NM_001013272   104259  
    		   20
    50
  • Danio rerio elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 (elovl4), mRNA
  • Elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4
    		• 335732
    		NM_199972   81952  
    		   19
    51
  • Danio rerio ATPase, Na+/K+ transporting, alpha 3b polypeptide (atp1a3b), mRNA
  • Transcribed locus, strongly similar to NP_571760.2 ATPase, Na+/K+ transporting, alpha 3b polypeptide [Danio rerio]
    		• 64611
    		NM_131685   76071  
    		   19
    52
  • Danio rerio zgc:92682 (zgc:92682), mRNA
  • Zgc:92682
    		•   NM_001002413   81987  
    		   19
    53
  • Danio rerio opsin 1 (cone pigments), medium-wave-sensitive, 4 (opn1mw4), mRNA
  • Opsin 1 (cone pigments), medium-wave-sensitive, 4
    		• 30504
    		NM_131254   81283  
    		   19
    54
  • Danio rerio arrestin 3, retinal (X-arrestin) (arr3), mRNA
  • Arrestin 3, retinal (X-arrestin)
  • Arrestin 3, retinal (X-arrestin)
    		• 796867
    		NM_200792   117978  
    81930  
    		   18
    55
  • Danio rerio ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle (atp5a1), nuclear gene encoding mitochondrial protein, mRNA
  • ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
    		• 553755
    		NM_001077355   76050 [**] 
    		   18
    56
  • Danio rerio ribosomal protein L3 (rpl3), mRNA
  • Ribosomal protein L3
    		• 322571
    		NM_001001590   75583  
    		   18
    57
  • Danio rerio ATPase, Na+/K+ transporting, beta 2a polypeptide (atp1b2a), mRNA
  • ATPase, Na+/K+ transporting, beta 2a polypeptide
    		• 64269
    		NM_131669   77891  
    		   18
    58
  • Danio rerio chromosome 20 open reading frame 149 homolog (human) (c20orf149), mRNA
  • Chromosome 20 open reading frame 149 homolog (human)
    		• 338304
    		NM_200079   76108  
    		   18
    59
  • Danio rerio ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (atp5c1), nuclear gene encoding mitochondrial protein, mRNA
  • ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
    		• 336957
    		NM_200041   75686  
    		   17
    60
  • Danio rerio zgc:153686 (zgc:153686), mRNA
  • Zgc:153686
    		• 777766
    		NM_001077804   75568  
    		   17
    61
  • Danio rerio malate dehydrogenase 1b, NAD (soluble) (mdh1b), mRNA
  • Malate dehydrogenase 1b, NAD (soluble)
    		• 335715
    		NM_199969   9860  
    		   16
    62
  • Danio rerio zgc:73075 (zgc:73075), mRNA
  • Zgc:73075
    		• 572207
    		NM_200825   144596  
    		   16
    63
  • PREDICTED: Danio rerio similar to delayed rectifier potassium channel Kv2 (LOC555921), mRNA
  • Novel protein similar to vertebrate potassium voltage-gated channel, Shab-related subfamily, member 1 (KCNB1)
    		• 555921
    		XM_678581   82619  
    		   16
    64
  • Danio rerio serine/threonine kinase 35 (stk35), mRNA
  • Hypothetical LOC796452
  • Serine/threonine kinase 35
    		• 568080
    		NM_001077616   120446  
    76552  
    		   16
    65
  • Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (ddx5), mRNA
  • Transcribed locus, strongly similar to NP_997777.1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Danio rerio]
  • DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
    		• 322206
    		NM_212612   114326  
    28420  
    		   16
    66
  • Danio rerio spermatogenesis associated 2 (spata2), mRNA
  • Transcribed locus
  • Transcribed locus, strongly similar to NP_001007283.1 glutathione peroxidase 4 [Danio rerio]
    		• 568830
    		NM_001080191   144130  
    144276  
    		   16
    67
  • Danio rerio ferritin, heavy polypeptide 1 (fth1), mRNA
  • Ferritin, heavy polypeptide 1
    		• 58108
    		NM_131585   6496  
    		   15
    68
  • Danio rerio aldolase a, fructose-bisphosphate, a (aldoaa), mRNA
  • Aldolase a, fructose-bisphosphate, a
    		• 336425
    		NM_194377   61171  
    		   15
    69
  • Danio rerio retinal degradation slow 4 (rds4), mRNA
  • Retinal degradation slow 4
    		• 559209
    		NM_131567   82605  
    		   15
    70
  • Danio rerio ATPase, H+ transporting, V1 subunit G isoform 1 (atp6v1g1), mRNA
  • ATPase, H+ transporting, V1 subunit G isoform 1
    		• 335025
    		NM_199934   370  
    		   15
    71
  • Danio rerio cytochrome c oxidase subunit IV isoform 1 (cox4i1), mRNA
  • Cytochrome c oxidase subunit IV isoform 1
    		• 326975
    		NM_214701   76095  
    		   15
    72
  • Danio rerio glycoprotein M6Aa (gpm6aa), mRNA
  • Transcribed locus, strongly similar to NP_998365.1 glycoprotein M6Aa [Danio rerio]
  • Glycoprotein M6Aa
    		• 368223
    		NM_213200   148411  
    28459  
    		   14
    73
  • Danio rerio ribosomal protein L7a (rpl7a), mRNA
  • Ribosomal protein L7a
    		• 337010
    		NM_200047   53820  
    		   14
    74
  • Danio rerio zgc:73138 (zgc:73138), mRNA
  • Zgc:73138
    		• 336334
    		NM_200009   80241  
    		   14
    75
  • Danio rerio glucose phosphate isomerase a (gpia), mRNA
  • Glucose phosphate isomerase a
    		• 246094
    		NM_144763   11244  
    		   14
    76
  • Danio rerio zgc:56085 (zgc:56085), mRNA
  • Zgc:56085
    		• 327506
    		NM_199816   11252  
    		   14
    77
  • Danio rerio ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1 (atp5f1), nuclear gene encoding mitochondrial protein, mRNA
  • ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1
    		• 449787
    		NM_001005960   76140  
    		   14
    78
  • Danio rerio rhodopsin gene, promoter region and partial cds
    		•   AY512503       14
    79
  • Rhodopsin
    		•     354 [**] 
    		   14
    80
  • Danio rerio zgc:77708 (zgc:77708), mRNA
  • Zgc:77708
    		• 325402
    		NM_205554   79422  
    		   13
    81
  • Danio rerio phosphodiesterase 6A, cGMP-specific, rod, alpha (pde6a), mRNA
  • Phosphodiesterase 6A, cGMP-specific, rod, alpha
    		• 368410
    		NM_001007160   9853  
    		   13
    82
  • Danio rerio guanylate kinase 1 (guk1), mRNA
  • Hypothetical protein LOC791705
    		• 393697
    		NM_200724   82951  
    		   13
    83
  • PREDICTED: Danio rerio hypothetical protein LOC100000094 (LOC100000094), mRNA
  • Similar to limb bud and heart development homolog
    		• 100000094
    		XM_001336435   81974 [**] 
    		   13
    84
  • Danio rerio non-metastatic cells 2-like, protein (NM23B) expressed in (nme2l), mRNA
  • Non-metastatic cells 2-like, protein (NM23B) expressed in
    		• 335716
    		NM_199970   9836  
    		   12
    85
  • PREDICTED: Danio rerio guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 (gngt2), mRNA
  • Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
    		• 335655
    		XM_001336994   19203  
    		   12
    86
  • Danio rerio ribosomal protein SA (rpsa), mRNA
  • Ribosomal protein SA
    		• 394027
    		NM_201052   75127  
    		   12
    87
  • Danio rerio ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d (atp5h), nuclear gene encoding mitochondrial protein, mRNA
  • ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d
    		• 393675
    		NM_200702   3417  
    		   12
    88
  • Danio rerio malate dehydrogenase 1a, NAD (soluble) (mdh1a), mRNA
  • Malate dehydrogenase 1a, NAD (soluble)
    		• 399662
    		NM_199947   4960  
    		   12
    89
  • Danio rerio zgc:73056 (zgc:73056), mRNA
  • Zgc:73056
    		• 393668
    		NM_200695   81060  
    		   12
    90
  • PREDICTED: Danio rerio similar to interphotoreceptor retinol-binding protein (LOC794630), mRNA
  • Similar to interphotoreceptor retinol-binding protein
    		• 794630
    		XM_001334600   75802 [**] 
    		   12
    91
  • Danio rerio poly A binding protein, cytoplasmic 1 a (pabpc1a), mRNA
  • Poly A binding protein, cytoplasmic 1 a
    		• 606498
    		NM_001031676   24504  
    		   12
    92
  • Danio rerio neurogenic differentiation (neurod), mRNA
  • Neurogenic differentiation
    		• 30169
    		NM_130978   75801  
    		   12
    93
  • Danio rerio zgc:136766 (zgc:136766), mRNA
  • N-myc downstream regulated gene 4
    		• 692305
    		NM_001045277   4520  
    		   12
    94
  • Danio rerio tubulin, alpha 8 like 4 (tuba8l4), mRNA
  • Tubulin, alpha 8 like 4
    		• 393154
    		NM_200185   121796  
    		   12
    95
  • Danio rerio ATPase, H+ transporting, V0 subunit D isoform 1 (atp6v0d1), mRNA
  • ATPase, H+ transporting, V0 subunit D isoform 1
    		• 322811
    		NM_199620   77332  
    		   11
    96
  • Danio rerio RNA binding protein with multiple splicing 2 (rbpms2), mRNA
  • RNA binding protein with multiple splicing 2
    		• 393229
    		NM_200259   81683  
    		   11
    97
  • Danio rerio zgc:77060 (zgc:77060), mRNA
  • Zgc:77060
    		• 431765
    		NM_001002218   81949  
    		   11
    98
  • Danio rerio ADP-ribosylation factor-like 6 interacting protein 1 (arl6ip1), mRNA
  • Transcribed locus, strongly similar to NP_957406.1 ADP-ribosylation factor-like 6 interacting protein [Danio rerio]
  • ADP-ribosylation factor-like 6 interacting protein 1
    		• 394087
    		NM_201112   114359  
    1214  
    		   11
    99
  • Danio rerio retinal pigment epithelium-specific protein a (rpepa), mRNA
  • Retinal pigment epithelium-specific protein a
    		• 393724
    		NM_200751   12451  
    		   11
    100
  • Danio rerio voltage-dependent anion channel 2 (vdac2), mRNA
  • Voltage-dependent anion channel 2
    		• 322126
    		NM_199585   75363  
    		   11


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