NbLib0084: NEI zebrafish whole eye unnormalized (naa)

Last GRIST date: 10/22/2008

View this library: Full List | Indexed by Chromosomal Position | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
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Group#Description Entrez Gene IdGenBankUniGene (Build Dr #114) Chromosomal Pos. (BLAT)Num. Clones
1
  • Danio rerio rhodopsin (rho), mRNA
  • Rhodopsin
  • 30295
    NM_131084   354  
    Zv7_NA695:276778
    chr7:2534988
    94
    2
  • Danio rerio zgc:73310 (zgc:73310), mRNA
  • Zgc:73310
  • Zgc:73310
  • 393758
    NM_200785   115522  
    132971  
    chr6:36349960
    42
    3
  • Danio rerio retinol binding protein 4, like (rbp4l), mRNA
  • Retinol binding protein 4, like
  • Transcribed locus, strongly similar to NP_956259.1 retinol binding protein 4, like [Danio rerio]
  • 335651
    NM_199965   119793  
    119811  
    chr12:37957536
    chr21:12060408
    24
    4
  • Danio rerio crystallin, gamma S1 (crygs1), mRNA
  • Crystallin, gamma S1
  • Transcribed locus, strongly similar to NP_001013294.1 crystallin, gamma S1 [Danio rerio]
  • 503587
    NM_001013276   118493  
    144218  
    chr22:9302291
    20
    5
  • Danio rerio guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 (gnat1), mRNA
  • Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
  • 140428
    NM_131868   32527  
    chr6:29773304
    18
    6
  • Danio rerio keratin 5 (krt5), mRNA
  • Keratin 5
  • 797351
    NM_131156   28410  
    chr23:7738353
    16
    7
  • Danio rerio creatine kinase, brain (ckb), mRNA
  • Creatine kinase, brain
  • 140744
    NM_173222   75625  
    chr20:22182261
    16
    8
  • Danio rerio zgc:73359 (zgc:73359), mRNA
  • Zgc:73359
  • 393810
    NM_200837   81929  
      15
    9
  • Danio rerio guanine nucleotide binding protein (G protein), beta polypeptide 3 (gnb3), mRNA
  • Guanine nucleotide binding protein (G protein), beta polypeptide 3
  • Transcribed locus
  • 406483
    NM_213202   144546  
    81932  
    chr19:2578679
    12
    10
  • Danio rerio opsin 1 (cone pigments), short-wave-sensitive 1 (opn1sw1), mRNA
  • Opsin 1 (cone pigments), short-wave-sensitive 1
  • 30582
    NM_131319   8194  
    chr4:14068691
    11
    11
  • Danio rerio elongation factor 1-alpha (ef1a), mRNA
  • Elongation factor 1-alpha
  • 30516
    NM_131263   31797  
    chr19:40605397
    11
    12
  • PREDICTED: Danio rerio crystallin, beta B2, transcript variant 1 (crybb2), mRNA
  •   XM_001336456     chr8:37577760
    11
    13
  • Danio rerio phosphodiesterase 6C, cGMP-specific, cone, alpha prime (pde6c), mRNA
  • Phosphodiesterase 6C, cGMP-specific, cone, alpha prime
  • 393845
    NM_200871   117127  
    chr12:3263633
    10
    14
  • PREDICTED: Danio rerio crystallin, beta B3 (crybb3), mRNA
  • Crystallin, beta B3
  • 553184
    XM_001338607   41866  
    chr5:2798306
    10
    15
  • Danio rerio zgc:56548 (zgc:56548), mRNA
  • Zgc:56548
  • 393989
    NM_201014   9906  
    chr14:51551239
    10
    16
  • Danio rerio bactin2 (bactin2), mRNA
  • Bactin2
  • 57935
    NM_181601   75125  
    chr1:130671
    chr3:38334972
    9
    17
  • Danio rerio guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 (gnat2), mRNA
  • Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
  • 140429
    NM_131869   81958  
    chr8:23640422
    9
    18
  • Danio rerio zgc:92533 (zgc:92533), mRNA
  • Zgc:92533
  • 445051
    NM_001003445   140396  
    chr19:2844425
    9
    19
  • Danio rerio zgc:153507 (zgc:153507), mRNA
  • Zgc:73060
  • 777628
    NM_001077736   117112  
    Zv7_NA456:12742
    chr12:1805992
    chr21:31345227
    9
    20
  • PREDICTED: Danio rerio phosducin 1 (pdc1), mRNA
  • Phosducin 1
  • 386613
    XM_677731   81948  
    chr2:17469941
    8
    21
  • Danio rerio bactin1 (bactin1), mRNA
  • Bactin1
  • 57934
    NM_131031   35143  
    chr1:4471583
    8
    22
  • Danio rerio apolipoprotein Eb (apoeb), mRNA
  • Apolipoprotein Eb
  • 30314
    NM_131098   23502  
    chr16:24390962
    8
    23
  • Danio rerio spermatogenesis associated 2 (spata2), mRNA
  • Spermatogenesis associated 2
  • 568830
    NM_001080191   29691  
    chr14:52982987
    8
    24
  • Danio rerio guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 (gngt1), mRNA
  • Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
  • 335656
    NM_199967   81940  
    chr19:37548565
    8
    25
  • Danio rerio chromosome 20 open reading frame 149 homolog (human) (c20orf149), mRNA
  • Chromosome 20 open reading frame 149 homolog (human)
  • 338304
    NM_200079   76108  
    chr8:21638051
    8
    26
  • Danio rerio crystallin, gamma M6 (crygm6), mRNA
  • Crystallin, gamma M6
  • 553966
    NM_001020794   15363  
    chr9:15350115
    7
    27
  • Danio rerio zgc:165530 (zgc:165530), mRNA
  • Prothymosin, alpha b
  • 559194
    NM_001098730   48738  
    chr2:2038037
    7
    28
  • Danio rerio ba1 globin (ba1), mRNA
  • Ba1 globin, like
  • 30216
    NM_131020   23445 [**] 
    chr3:52937152
    7
    29
  • Danio rerio similar to ORF1-encoded protein (LOC797572), mRNA
  • Similar to ORF1-encoded protein
  • Zgc:174162
  • Hypothetical LOC794241
  • 797572
    NM_001114459   106818  
    117183  
    149555  
    Zv7_NA306:37035
    Zv7_scaffold2506:43568
    Zv7_scaffold2561:789946
    Zv7_scaffold2567:173214
    chr10:14284575
    chr11:11951267
    chr13:5768445
    chr14:29601505
    chr15:8754875
    chr16:2792822
    chr17:4561981
    chr20:15698963
    chr21:40346419
    chr3:15220443
    chr4:36069898
    chr5:465106
    chr6:48112979
    chr7:43275832
    7
    30
  • PREDICTED: Danio rerio similar to Proline-rich nuclear receptor coactivator 2 (LOC565522), mRNA
  • Proline-rich nuclear receptor coactivator 2
  • 565522
    XM_688802   70123  
    chr16:39542199
    chr19:30128511
    6
    31
  • Danio rerio zgc:153009 (zgc:153009), mRNA
  • 565379
    NM_001077612     Zv7_scaffold2592:19061
    Zv7_scaffold2598:82420
    chr11:33496521
    chr13:41234089
    chr15:17600786
    chr20:36028208
    chr24:6245900
    chr3:29508329
    chr4:28916911
    chr5:26805788
    6
    32
  • Danio rerio es1 protein (es1), mRNA
  • Es1 protein
  • 30237
    NM_131039   1461  
    chr8:776513
    6
    33
  • Danio rerio translationally controlled tumor protein (tctp), mRNA
  • Similar to Translationally-controlled tumor protein (TCTP)
  • Translationally controlled tumor protein
  • 30723
    NM_198140   116170  
    75674  
    chr1:28730282
    6
    34
  • Danio rerio arrestin 3, retinal (X-arrestin) (arr3), mRNA
  • Arrestin 3, retinal (X-arrestin)
  • 796867
    NM_200792   117978  
    chr14:37076440
    6
    35
  • Danio rerio opsin 1 (cone pigments), long-wave-sensitive, 2 (opn1lw2), mRNA
  • Opsin 1 (cone pigments), long-wave-sensitive, 2
  • 436716
    NM_001002443   116975  
    chr11:22708364
    6
    36
  • Danio rerio ribosomal protein, large, P0 (rplp0), mRNA
  • Ribosomal protein, large, P0
  • 58101
    NM_131580   55617  
    chr5:987247
    6
    37
  • Danio rerio guanylate cyclase activator 1C (guca1c), mRNA
  • Guanylate cyclase activator 1C
  • 373099
    NM_194393   81617  
    Zv7_NA1718:23258
    6
    38
  • Danio rerio opsin 1 (cone pigments), medium-wave-sensitive, 2 (opn1mw2), mRNA
  • Opsin 1 (cone pigments), medium-wave-sensitive, 2
  • 360151
    NM_182891   9850  
    chr6:28039775
    6
    39
  • Danio rerio ribosomal protein L23a (rpl23a), mRNA
  • Ribosomal protein L23a
  • 335539
    NM_001001593   76079  
    chr21:24551442
    5
    40
  • Danio rerio zgc:100982 (zgc:100982), mRNA
  • Zgc:100982
  • 445319
    NM_001003776   84694  
    chr19:25036588
    5
    41
  • Danio rerio ribosomal protein L12 (rpl12), mRNA
  • Ribosomal protein L12
  • 327089
    NM_201584   75945  
    chr5:27673306
    5
    42
  • PREDICTED: Danio rerio similar to interphotoreceptor retinol-binding protein (LOC794630), mRNA
  • Similar to interphotoreceptor retinol-binding protein
  • 794630
    XM_001334600   75802 [**] 
    chr12:1159919
    5
    43
  • Danio rerio crystallin, gamma M7 (crygm7), mRNA
  • Crystallin, gamma M7
  • 553967
    NM_001020795   87946  
    chr9:15342431
    5
    44
  • Danio rerio FK506 binding protein 5 (fkbp5), mRNA
  • FK506 binding protein 5
  • 368924
    NM_213149   78793  
    chr6:27965556
    5
    45
  • Danio rerio crystallin, gamma MX (crygmx), mRNA
  • Crystallin, gamma MX
  • 335789
    NM_001013262   117303  
    chr12:28956526
    5
    46
  • Danio rerio zgc:85653 (zgc:85653), mRNA
  • Zgc:85653
  • 321051
    NM_212577   76279  
    chr2:6716663
    5
    47
  • Danio rerio -antigen; retina and pineal gland (arrestin) (sag), mRNA
  • -antigen; retina and pineal gland (arrestin)
  • 619268
    NM_001033749   82000  
    chr15:45335043
    5
    48
  • Danio rerio crystallin, gamma S2 (crygs2), mRNA
  • Crystallin, gamma S2
  • 497123
    NM_001012262   116458  
    chr9:21420934
    5
    49
  • Danio rerio guanine nucleotide binding protein (G protein), beta polypeptide 1 (gnb1), mRNA
  • Aspartate beta-hydroxylase
  • Guanine nucleotide binding protein (G protein), beta polypeptide 1
  • 322104
    NM_212609   31547  
    75526  
    chr8:56330411
    5
    50
  • PREDICTED: Danio rerio similar to beta thymosin-like protein, transcript variant 1 (LOC793949), mRNA
  • 793949
    XM_001332670     chr9:43932397
    5
    51
  • Danio rerio zgc:136474 (zgc:136474), mRNA
  • Myosin, heavy polypeptide 10, non-muscle
  • Zgc:136474
  • 724003
    NM_001045308   77491  
    77881  
    chr13:41979111
    5
    52
  • Danio rerio ribosomal protein SA (rpsa), mRNA
  • Ribosomal protein SA
  • 394027
    NM_201052   75127  
    chr6:3539885
    5
    53
  • Danio rerio ribosomal protein L13a (rpl13a), mRNA
  • Transcribed locus, strongly similar to NP_997949.1 ribosomal protein L13a [Danio rerio]
  • Ribosomal protein L13a
  • 560828
    NM_212784   143584  
    32450  
    chr17:2086675
    5
    54
  • Danio rerio retinal degradation slow 4 (rds4), mRNA
  • Retinal degradation slow 4
  • 559209
    NM_131567   82605  
    chr13:2342149
    5
    55
  • Danio rerio, Similar to RIKEN cDNA 1010001J12 gene, clone IMAGE:3814939, mRNA
  • Transcribed locus, strongly similar to NP_055278.1 Lsm3 protein [Homo sapiens]
  •   BC044441   75123  
    chr14:52980115
    5
    56
  • Danio rerio zgc:103755 (zgc:103755), mRNA
  • Si:dkey-181i3.3
  • Retinaldehyde binding protein 1a
  • Transcribed locus
  • 449988
    NM_001006009   119437  
    120152  
    132991  
    chr11:22931677
    chr12:14887617
    chr17:49514633
    chr4:23735995
    chr8:40739247
    5
    57
  • Danio rerio zgc:66109 (zgc:66109), mRNA
  • Hypothetical LOC792319
  • 393531
    NM_200559   107708  
    chr2:2199885
    4
    58
  • Danio rerio ribosomal protein L6 (rpl6), mRNA
  • Ribosomal protein L6
  • 336727
    NM_001003844   28231  
    chr8:8527255
    4
    59
  • Danio rerio zgc:92294 (zgc:92294), mRNA
  • Zgc:92294
  • 449546
    NM_001005588   82842  
    chr25:6446675
    4
    60
  • Danio rerio zinc finger, AN1-type domain 5a (zfand5a), mRNA
  • Zinc finger, AN1-type domain 5a
  • 406312
    NM_213039   3123  
    chr5:19855147
    4
    61
  • Danio rerio glutamate decarboxylase 1 (gad1), mRNA
  • Glutamate decarboxylase 1
  • 378441
    NM_194419   81985  
    chr6:1361569
    4
    62
  • Danio rerio midkine-related growth factor (mdka), mRNA
  • Midkine-related growth factor
  • 30277
    NM_131070   31448  
    chr7:24277023
    4
    63
  • Danio rerio transducer of ERBB2, 1a (tob1a), mRNA
  • Transducer of ERBB2, 1a
  • 386629
    NM_198363   79310  
    chr3:15100850
    4
    64
  • Danio rerio solute carrier family 25 alpha, member 5 (slc25a5), nuclear gene encoding mitochondrial protein, mRNA
  • Solute carrier family 25 alpha, member 5
  • 192321
    NM_173247   30295  
    chr14:37308783
    4
    65
  • Danio rerio retinal degradation slow 2 (rds2), mRNA
  • Retinal degradation slow 2
  • 58085
    NM_131566   81979  
    chr12:32162897
    4
    66
  • Danio rerio heat shock protein 90kDa alpha (cytosolic), class B member 1 (hsp90ab1), mRNA
  • Heat shock protein 90kDa alpha (cytosolic), class B member 1
  • 30573
    NM_131310   35688  
    chr20:53930107
    4
    67
  • Danio rerio synaptosome-associated protein 25 b (snap25b), mRNA
  • Synaptosome-associated protein 25 b
  • 30711
    NM_131434   7598  
    chr17:9852502
    4
    68
  • Danio rerio crystallin, beta A1 (cryba1), mRNA
  • Crystallin, beta A1a
  • 436683
    NM_001002410   32100  
    chr15:26351240
    4
    69
  • Danio rerio malate dehydrogenase 1a, NAD (soluble) (mdh1a), mRNA
  • Malate dehydrogenase 1a, NAD (soluble)
  • 399662
    NM_199947   4960  
    chr10:24495024
    4
    70
  • Danio rerio ATPase, Na+/K+ transporting, alpha 3b polypeptide (atp1a3b), mRNA
  • ATPase, Na+/K+ transporting, alpha 3b polypeptide
  • 64611
    NM_131685   122142  
    chr3:62157836
    4
    71
  • Danio rerio arginase, type II (arg2), nuclear gene encoding mitochondrial protein, mRNA
  • Arginase, type II
  • 322614
    NM_199611   77297  
    chr13:32515907
    4
    72
  • Danio rerio zgc:103663 (zgc:103663), mRNA
  • Zgc:103663
  • 492490
    NM_001007362   81071  
    chr11:44367693
    4
    73
  • Danio rerio zgc:92722 (zgc:92722), mRNA
  • Crystallin, beta A2b
  • 436857
    NM_001002584   133611  
    chr9:7354881
    4
    74
  • Danio rerio solute carrier family 20, member 1b (slc20a1b), mRNA
  • Solute carrier family 20, member 1b
  • 321541
    NM_212588   5307  
    chr10:12498957
    4
    75
  • Danio rerio DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (ddx5), mRNA
  • DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
  • 322206
    NM_212612   28420  
    chr3:21122861
    4
    76
  • Danio rerio crystallin, gamma M3 (crygm3), mRNA
  • Crystallin, gamma M3
  • 493631
    NM_001007786   132190  
    chr9:15703547
    4
    77
  • PREDICTED: Danio rerio hypothetical protein LOC792781 (LOC792781), mRNA
  •   XM_001332347     chr18:5495355
    4
    78
  • Danio rerio inositol hexaphosphate kinase 2 (ihpk2), mRNA
  • Inositol hexaphosphate kinase 2
  • 322041
    NM_201470   76762  
    chr6:29270098
    4
    79
  • Danio rerio SH3-domain GRB2-like 2 (sh3gl2), mRNA
  • SH3-domain GRB2-like 2
  • 394091
    NM_201116   96738  
    chr1:25006839
    4
    80
  • Danio rerio DENN/MADD domain containing 4A (dennd4a), mRNA
  • DENN/MADD domain containing 4A
  • 558211
    NM_001080989   87366  
    chr18:15118790
    4
    81
  • Danio rerio zgc:153129 (zgc:153129), mRNA
  • Zgc:153129
  • 768128
    NM_001077274   74454  
    Zv7_NA792:228029
    4
    82
  • PREDICTED: Danio rerio similar to hCG1987869, (LOC571955), mRNA
  • Transcribed locus
  •   XM_695602   121604  
    chr18:5491626
    4
    83
  • Danio rerio zgc:92682 (zgc:92682), mRNA
  • Transcribed locus, strongly similar to NP_001096607.1 hypothetical protein LOC436686 [Danio rerio]
  • Zgc:92682
  •   NM_001002413   119174  
    81987  
    chr3:29892133
    4
    84
  • Danio rerio zgc:110159 (zgc:110159), mRNA
  • Zgc:110159
  • 550548
    NM_001017850   105609  
    chr16:41157748
    4
    85
  • Danio rerio eukaryotic translation initiation factor 1B (eif1b), mRNA
  • Eukaryotic translation initiation factor 1B
  • 322237
    NM_199588   75862  
    chr19:2886028
    4
    86
  • Danio rerio myosin, heavy polypeptide 1, skeletal muscle (myhz1), mRNA
  • Myosin, heavy polypeptide 1, skeletal muscle
  • Si:ch211-158m24.7
  • Ns:zf-e523
  • 58142
    NM_001115089   104477  
    132261  
    148415  
    chr5:24070949
    4
    87
  • PREDICTED: Danio rerio hypothetical protein LOC100002688 (LOC100002688), mRNA
  •   XM_001342380     Zv7_NA154:11349
    4
    88
  • Danio rerio zgc:77366 (zgc:77366), mRNA
  • Zgc:77366
  • 323529
    NM_212645   75559  
    chr14:21288185
    4
    89
  • Danio rerio arylalkylamine N-acetyltransferase (aanat2), mRNA
  • Arylalkylamine N-acetyltransferase
  • 30685
    NM_131411   81299  
    chr3:53206765
    4
    90
  • Danio rerio Y box binding protein 1 (ybx1), mRNA
  • Y box binding protein 1
  • 795398
    NM_131620   148426  
    chr8:43429033
    4
    91
  • PREDICTED: Danio rerio hypothetical LOC565631, transcript variant 1 (LOC565631), mRNA
  • Hypothetical LOC100002387
  •   XM_684669   113485  
    chr1:9750195
    chr15:9030990
    4
    92
  • Danio rerio glyceraldehyde-3-phosphate dehydrogenase, spermatogenic (gapdhs), mRNA
  • Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
  • Zgc:92371
  • 406367
    NM_213094   75409  
    76062  
    chr16:43604265
    4
    93
  • Danio rerio ferritin, heavy polypeptide 1 (fth1), mRNA
  • Ferritin, heavy polypeptide 1
  • 58108
    NM_131585   6496  
    chr7:6920192
    4
    94
  • Danio rerio zgc:153704 (zgc:153704), mRNA
  • Zgc:153704
  • 767759
    NM_001076726   87016  
    Zv7_NA792:274458
    4
    95
  • Danio rerio coiled-coil-helix-coiled-coil-helix domain containing 2 (chchd2), mRNA
  • Coiled-coil-helix-coiled-coil-helix domain containing 10
  • 393757
    NM_200784   81806  
    chr21:7937021
    4
    96
  • Danio rerio ribosomal protein S2 (rps2), mRNA
  • Ribosomal protein S2
  • 406565
    NM_213279   32854  
    chr3:15312964
    4
    97
  • Danio rerio heat shock protein 8 (hspa8), mRNA
  • CDNA clone IMAGE:8778123
  • Heat shock protein 8
  • 573376
    NM_001110403   143579  
    75087  
    chr10:25061453
    4
    98
  • PREDICTED: Danio rerio hypothetical LOC559332, transcript variant 1 (LOC559332), mRNA
  • Similar to phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide
  • 559332
    XM_679910   83827  
    chr21:12026107
    3
    99
  • PREDICTED: Danio rerio hypothetical protein LOC100005675 (LOC100005675), mRNA
  • Similar to NMDA receptor 1
  • 100005675
    XM_001340391   83363  
    chr5:21394976
    3
    100
  • Danio rerio ribosomal protein L30 (rpl30), mRNA
  • Ribosomal protein L30
  • 336713
    NM_200028   34631  
    chr19:30515666
    3


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