NbLib0043: dbEST rat whole eye unnormalized (rneye01)

Last GRIST date: 10/08/2008

This library includes the following UniGene libs: Lib.8738, Lib.8739, Lib.9650.

View this library: Full List \| Indexed by Chromosomal Position \| Indexed by GO Term \| Tab Delimited	Understanding NEIBank Data
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Group#	Description	Entrez Gene Id	GenBank	UniGene (Build Rn #176)	Chromosome (UniGene)	Num. Clones
1	PREDICTED: Rattus norvegicus hypothetical protein Dd25 (Dd25), mRNA Hypothetical protein Dd25	360863	XM_001074497	8478	13q22	55
2	Transcribed locus			212087	14	46
3	Transcribed locus			147567	5	39
4	Transcribed locus			210426	3	28
5	Transcribed locus			207992	1	26
6	Transcribed locus			212262 [**]	6	26
7	Transcribed locus			161236	10	25
8	Rattus norvegicus crystallin, alpha A (Cryaa), mRNA Crystallin, alpha A	24273	NM_012534	127769 [**]		24
9	Transcribed locus			212000	3	24
10	PREDICTED: Rattus norvegicus zinc finger protein 291 (Znf291), mRNA Zinc finger protein 291	117521	XM_001070332	163002	8q24	20
11	Transcribed locus			76502	7	19
12	Transcribed locus			212091	1	19
13	Transcribed locus			128671	17	19
14	Rattus norvegicus synaptic vesicle glycoprotein 2b (Sv2b), mRNA Synaptic vesicle glycoprotein 2b	117556	NM_057207	58137 [**]	1q31	18
15	Transcribed locus			206190	1	18
16	PREDICTED: Rattus norvegicus crystallin, beta A1 (Cryba1), mRNA Crystallin, beta A1	25583	XM_001080813	20326 [**]	10q24-q25	17
17	Transcribed locus			73452	11	16
18	Rattus norvegicus insulin degrading enzyme (Ide), mRNA Insulin degrading enzyme	25700	NM_013159	45029 [**]	1q53	15
19	Rattus norvegicus leucine-rich repeat-containing G protein-coupled receptor 4 (Lgr4), mRNA Leucine-rich repeat-containing G protein-coupled receptor 4	286994	NM_173328	162671 [**]	3q33	15
20	Rattus norvegicus replication factor C (activator 1) 4 (predicted) (Rfc4_predicted), mRNA Replication factor C (activator 1) 4	288003	NM_001105869	17046 [**]	11q23	15
21	Transcribed locus			212187	1	15
22	PREDICTED: Rattus norvegicus similar to serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 (LOC683254), mRNA Similar to serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2		XM_001066142	176515	15p12	14
23	Rattus norvegicus RNA-binding region (RNP1, RRM) containing 2 (Rnpc2), mRNA RNA binding motif protein 39	362251	NM_001013207	8555	3q42	14
24	PREDICTED: Pan troglodytes SF3b10, transcript variant 1 (SF3B5), mRNA Transcribed locus, strongly similar to NP_780311.2 splicing factor 3b, subunit 5 [Mus musculus]	748026	XM_001172705	217067 [**]		14
25	Cytochrome c oxidase, subunit VIIc			105968	2	14
26	Transcribed locus			49412	5	14
27	Transcribed locus			212198	15	14
28	Dpy-19-like 1 (C. elegans)			22725	8q13	14
29	G protein-coupled receptor, family C, group 5, member B			47330	1q35	14
30	Transcribed locus			212189	8	14
31	Rattus norvegicus crystallin, beta A4 (Cryba4), mRNA Crystallin, beta A4	64348	NM_031689	10802 [**]		13
32	Rattus norvegicus similar to hypothetical protein D630010C10 (RGD1309752), mRNA Family with sequence similarity 126, member B	316415	NM_001025710	149172 [**]	9q31	13
33	Mus musculus RIKEN cDNA A330103N21 gene, mRNA (cDNA clone IMAGE:30135592) Transcribed locus	16001	BC062186	168085 [**]	1	13
34	PREDICTED: Rattus norvegicus similar to tumor suppressor candidate 5 (LOC687797), mRNA Transcribed locus, strongly similar to XP_001080179.1 PREDICTED: similar to tumor suppressor candidate 5 [Rattus norvegicus]	687797	XM_001080179	160853	12	13
35	Rattus norvegicus crystallin, alpha B (Cryab), mRNA Crystallin, alpha B	25420	NM_012935	98208	8q23	13
36	Transcribed locus			26591	2	13
37	Ets variant gene 3 Transcribed locus			220231 [] 7937 []	2	13
38	Transcribed locus			212266	18	13
39	Transcribed locus			212027	10	13
40	Transcribed locus			176371	2	13
41	Transcribed locus			200269	9	13
42	Rattus norvegicus crystallin, gamma C (Crygc), transcript variant 1, mRNA Crystallin, gamma B Crystallin, gamma C	24277	NM_033483	202960 [**] 81172	9q32 9q32-q33	12
43	Rattus norvegicus histone cluster 1, H4b (Hist1h4b), mRNA Histone cluster 1, H4b Transcribed locus Transcribed locus	64627	NM_022686	1659 [**] 199251 203229	17q11 17 17	12
44	Rattus norvegicus ribosomal protein L27 (Rpl27), mRNA Similar to ribosomal protein L27 Ribosomal protein L27	64306	NM_022514	121875 1254	Xq31 10q32.1	12
45	PREDICTED: Rattus norvegicus similar to HTPAP protein (predicted) (RGD1306289_predicted), mRNA Phosphatidic acid phosphatase type 2 domain containing 1A	309014	XM_001080468	53410	1q37	12
46	Rattus norvegicus glutamate oxaloacetate transaminase 2, mitochondrial (Got2), nuclear gene encoding mitochondrial protein, mRNA Glutamate oxaloacetate transaminase 2, mitochondrial	25721	NM_013177	98650	19p13	12
47	Rattus norvegicus LIM domain binding 1 (predicted) (Ldb1_predicted), mRNA LIM domain binding 1	309447	NM_001107601	102427 [**]	1q54	12
48	Transcribed locus, strongly similar to NP_001032798.1 RUN and SH3 domain containing 2 [Mus musculus]			216492		12
49	Transcribed locus			46460	17	12
50	Transcribed locus			160417	14	12
51	Transcribed locus			202072	1	12
52	Transcribed locus			212029	11	12
53	Transcribed locus			156153	12	12
54	Transcribed locus			60868	7	12
55	PREDICTED: Rattus norvegicus peroxisome biogenesis factor 5 (predicted) (Pex5_predicted), mRNA Peroxisome biogenesis factor 5	312703	XM_001062081	14316 [**]	4q42	11
56	Rattus norvegicus Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (Leo1), mRNA Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	300837	NM_001005548	43195 [**]	8q24	11
57	Rattus norvegicus similar to RIKEN cDNA 3110005O21 (RGD1304823), mRNA Jumonji domain containing 5	308976	NM_001037196	22093	1q36	11
58	PREDICTED: Pan troglodytes HMG-BOX transcription factor BBX, transcript variant 1 (BBX), mRNA Transcribed locus	470876	XM_001149933	23024 [**]	11	11
59	Rattus norvegicus DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) (Dclre1b), mRNA DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)	310745	NM_001025687	39355	2q34	11
60	Crystallin, beta B2			10350 [**]		11
61	Transcribed locus			207071	1	11
62	Transcribed locus			66604	5	11
63	Hypothetical protein LOC691452			173051 [**]	1q35	11
64	Transcribed locus			212020	20	11
65	Transcribed locus			211999	5	11
66	Transcribed locus			212201	10	11
67	Transcribed locus			204071 [**]	14	11
68	Unidentified BI291228					11
69	Rattus norvegicus crystallin, beta A2 (Cryba2), mRNA Crystallin, beta A2	286925	NM_173140	204241 [**]	9q33	10
70	Rattus norvegicus CDK105 protein (Cdk105), mRNA Transcribed locus	171456	NM_134415	168964	2	10
71	Rattus norvegicus procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide (predicted) (P4ha2_predicted), mRNA Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	360526	NM_001108275	79891	10q22	10
72	Rattus norvegicus ATPase, Cu++ transporting, beta polypeptide (Atp7b), mRNA ATPase, Cu++ transporting, beta polypeptide	24218	NM_012511	10025	16q12.2-q12.4	10
73	Rattus norvegicus nuclear receptor subfamily 1, group H, member 2 (Nr1h2), mRNA Nuclear receptor subfamily 1, group H, member 2	58851	NM_031626	786 [**]	1q22	10
74	Rattus norvegicus nucleobindin 1 (Nucb1), mRNA Nucleobindin 1	84595	NM_053463	1492 [**]	1q22	10
75	Rattus norvegicus scf mRNA for stem cell factor KL-2, complete cds Kit ligand	60427	AB105879	44216	7q13	10
76	PREDICTED: Rattus norvegicus hypothetical protein LOC681752 (LOC681752), mRNA Heterogeneous nuclear ribonucleoprotein A2/B1		XM_001058260	4057	4q24	10
77	Rattus norvegicus CXXC finger 5 (Cxxc5), mRNA CXXC finger 5	291670	NM_001007628	105695 [**]	18p11	10
78	Transcribed locus			176854 66948	4 4	10
79	Transcribed locus			26912	15	10
80	Transcribed locus			154182	17	10
81	Orthodenticle homolog 2 (Drosophila)			35222	15p14	10
82	Transcribed locus			146781	16	10
83	Transcribed locus			176846 [**]	4	10
84	General transcription factor IIIC, polypeptide 3			6721	9q31	10
85	Transcribed locus			212024	19	10
86	Transcribed locus			212010	3	10
87	Transcribed locus			164603	9	10
88	Rattus norvegicus Tnf receptor associated factor 4 (predicted) (Traf4_predicted), mRNA Tnf receptor associated factor 4	303285	NM_001107017	3219 [**]	10q25	9
89	PREDICTED: Rattus norvegicus a disintegrin and metalloprotease domain 10 (Adam10), mRNA CDNA clone IMAGE:7320912 A disintegrin and metallopeptidase domain 10	29650	XM_001054737	36437 42924 [**]	8 8q24	9
90	Rattus norvegicus peptidylprolyl isomerase C (Ppic), mRNA Peptidylprolyl isomerase C	291463	NM_001004215	144176 [**]	18q11	9
91	Rattus norvegicus similar to RIKEN cDNA 2310008M10 (predicted) (RGD1560708_predicted), mRNA DC2 protein	362040	NM_001108566	1889 [**]	2q43	9
92	Human p38gamma MAP Kinase mRNA, complete cds Transcribed locus Transcribed locus	6300	U66243	166715 204071 [**]	2 14	9
93	Rattus norvegicus discs, large homolog 4 (Drosophila) (Dlgh4), mRNA Discs, large homolog 4 (Drosophila)	29495	NM_019621	9765 [**]	10q24	9
94	PREDICTED: Rattus norvegicus cytidine 5'-triphosphate synthase (predicted) (Ctps_predicted), mRNA Cytidine 5'-triphosphate synthase Transcribed locus	313560	XM_001053648	162834 176859	5q36 5	9
95	Rattus norvegicus inhibitor of growth family, member 3 (Ing3), mRNA Inhibitor of growth family, member 3	312154	NM_001034107	52988 [**]	4q22	9
96	PREDICTED: Rattus norvegicus hypothetical protein LOC687517 (LOC687517), mRNA Hypothetical protein LOC691452	687517	XM_001078905	173051 [**]	1q35	9
97	PREDICTED: Rattus norvegicus similar to GCN1 general control of amino-acid synthesis 1-like 1, transcript variant 1 (LOC690632), mRNA GCN1 general control of amino-acid synthesis 1-like 1 (yeast)	690632	XM_001072034	98494 [**]	12q16	9
98	PREDICTED: Rattus norvegicus similar to zinc finger protein 740 (LOC685834), mRNA Similar to zinc finger protein 740	685834	XM_001065442	144456	7q36	9
99	Rattus norvegicus nuclear receptor subfamily 4, group A, member 1 (Nr4a1), mRNA Nuclear receptor subfamily 4, group A, member 1	79240	NM_024388	10000 [**]	7q36	9
100	Rattus norvegicus similar to 9230105E10Rik protein (RGD1304579), mRNA Similar to 9230105E10Rik protein	308906	NM_001014023	12117	1q32	9

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