NbLib0080: NEI dog eye minus lens unnormalized (or)

Last GRIST date: 10/20/2008

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Group#	Description	Entrez Gene Id	GenBank	UniGene (Build Cfa #22)	Chromosomal Pos. (BLAT)	Num. Clones
1	Canis lupus familiaris rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant) (RHO), mRNA Rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant)	493763	NM_001008276	7396	chr20:8637373	14
2	Felis catus elongation factor 1 alpha (EF1A), mRNA Similar to eukaryotic translation elongation factor 1 alpha 2	493922	NM_001009326	39097 [**]	chr3:63720077 chr31:16900799 chr4:70900150	13
3	PREDICTED: Canis familiaris similar to vimentin, transcript variant 1 (LOC477991), mRNA Vimentin	477991	XM_535175	25093	chr2:22506213	11
4	Canis lupus familiaris aldehyde dehydrogenase 3 family, memberA1 (ALDH3A1), mRNA Aldehyde dehydrogenase 3 family, memberA1	489526	NM_001082420	22321	chr5:43468234	10
5	Canis lupus familiaris guanine nucleotide binding protein (G protein), beta polypeptide 1 (GNB1), mRNA Guanine nucleotide binding protein (G protein), beta polypeptide 1	403912	NM_001003236	3773 [**]	chr5:59785078	10
6	Canis lupus familiaris secreted frizzled-related protein 2 (SFRP2), mRNA Secreted frizzled-related protein 2	475471	NM_001002987	1200 [**]	chr15:54562480	7
7	PREDICTED: Canis familiaris aldolase A, transcript variant 1 (LOC479787), mRNA Aldolase A, fructose-bisphosphate	479787	XM_536914	39582	chr6:21091071	6
8	Canis lupus familiaris glyceraldehyde-3-phosphate dehydrogenase (GAPDH), mRNA Glyceraldehyde-3-phosphate dehydrogenase	403755	NM_001003142	39120	chr14:48140840 chr27:41496895 chr3:65083154	6
9	Canis lupus familiaris S-antigen; retina and pineal gland (arrestin) (SAG), mRNA S-antigen; retina and pineal gland (arrestin)	403906	NM_001003230	3764	chr25:47814680	6
10	PREDICTED: Canis familiaris apolipoprotein E, transcript variant 1 (APOE), mRNA Apolipoprotein E	476438	XM_533644	16211	chr1:113416514	6
11	PREDICTED: Canis familiaris similar to synaptosomal-associated protein 25, transcript variant 3 (LOC477158), mRNA Synaptosomal-associated protein, 25kDa	477158	XM_844584	1207	chr24:15001358	5
12	Felis catus cytosolic malate dehydrogenase (MDH), mRNA Malate dehydrogenase 1, NAD (soluble)	493924	NM_001009329	3262	chr10:66484170	5
13	PREDICTED: Canis familiaris similar to Actin, alpha skeletal muscle (Alpha-actin 1), transcript variant 2 (LOC488984), mRNA Similar to Actin, alpha skeletal muscle (Alpha-actin 1)	488984	XM_843847	39173	chr4:12811055	5
14	Canis lupus familiaris cathepsin K (CTSK), mRNA Cathepsin K	608843	NM_001033996	588	chr17:63008790	4
15	PREDICTED: Canis familiaris similar to 60S ribosomal protein L8, transcript variant 1 (LOC475130), mRNA Ribosomal protein L8	475130	XM_532360	4446	chr13:41133008	4
16	PREDICTED: Canis familiaris similar to ADP/ATP translocase 3 (Adenine nucleotide translocator 2) (ANT 3) (ADP,ATP carrier protein 3) (Solute carrier family 25, member 6) (ADP,ATP carrier protein, isoform T2) (LOC480830), mRNA Solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6	480830	XM_537947	39146	chrX:880886	4
17	PREDICTED: Canis familiaris similar to cold inducible RNA binding protein, transcript variant 2 (LOC476755), mRNA Cold inducible RNA binding protein	476755	XM_863507	4292	chr20:60664241	4
18	Canis lupus familiaris keratin 12 (KRT12), mRNA Keratin 12	100034663	NM_001082421	44086	chr9:25152646	4
19	PREDICTED: Canis familiaris similar to retinol-binding protein 4, plasma precursor (LOC477775), mRNA Retinol binding protein 4, plasma	477775	XM_534969	39479	chr28:10823220	4
20	Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_80683) mRNA, complete cds Ubiquitin C Similar to polyubiquitin	5930082	XM_001766821	39108 47099	chr26:8017655 chr3:35559314 chrUn:75843797	4
21	PREDICTED: Canis familiaris similar to Fibulin-1 precursor (LOC474468), mRNA Fibulin 1	474468	XM_531698	45531	chr10:23610779	4
22	PREDICTED: Canis familiaris mitochondrial H+ transporting ATP synthase F1, transcript variant 2 (ATP5A1), mRNA ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	480149	XM_847784	3975	chr31:10462965 chr7:48100708	4
23	PREDICTED: Canis familiaris ribosomal protein, large, P0, transcript variant 1 (RPLP0), mRNA Ribosomal protein, large, P0	403645	XM_535894	727	chr26:19177264 chr35:16689033	4
24	Canis lupus familiaris phosphodiesterase 6G, cGMP-specific, rod, gamma (PDE6G), mRNA Phosphodiesterase 6G, cGMP-specific, rod, gamma	403911	NM_001003235	3772	chr9:3516066	3
25	PREDICTED: Canis familiaris similar to Galectin-3 binding protein precursor (Lectin galactoside-binding soluble 3 binding protein) (Mac-2 binding protein) (Mac-2 BP) (MAC2BP) (Tumor-associated antigen 90K) (LOC483345), mRNA Lectin, galactoside-binding, soluble, 3 binding protein	483345	XM_540464	21556	chr9:5449460	3
26	PREDICTED: Canis familiaris similar to Coiled-coil domain containing protein 3 precursor (LOC607593), mRNA Coiled-coil domain containing 3	607593	XM_844332	9084	chr2:26434204	3
27	PREDICTED: Canis familiaris Ribosomal protein L7a (RPL7A), mRNA Ribosomal protein L7a	403678	XM_537800	46936	chr9:53121173	3
28	PREDICTED: Canis familiaris tyrosinase-related protein 1, transcript variant 1 (TYRP1), mRNA Tyrosinase-related protein 1	403479	XM_531934	193	chr11:36361726	3
29	PREDICTED: Canis familiaris similar to 40S ribosomal protein S2, transcript variant 1 (LOC479886), mRNA Ribosomal protein S2 Similar to 40S ribosomal protein S2	479886	XM_537011	26104 45576	chr6:42007964 chr8:8145605	3
30	Canis lupus familiaris myosin, heavy chain 2, skeletal muscle, adult (MYH2), mRNA Myosin, heavy chain 2, skeletal muscle, adult	608242	NM_001076795	45897	chr5:37808804	3
31	PREDICTED: Canis familiaris similar to Tubulin alpha-2 chain (Alpha-tubulin 2) (LOC608864), mRNA Tubulin, alpha 1a	608864	XM_846002	45033	chr27:8471469	3
32	PREDICTED: Canis familiaris similar to EGF-containing fibulin-like extracellular matrix protein 1 isoform a precursor (LOC474604), mRNA EGF-containing fibulin-like extracellular matrix protein 1	474604	XM_531834	22953	chr10:59782776	3
33	PREDICTED: Canis familiaris p68 RNA helicase, transcript variant 1 (ddx5), mRNA DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	480472	XM_537591	1172	chr9:15432723	3
34	PREDICTED: Canis familiaris similar to transient receptor potential cation channel, subfamily M, member 1 (LOC488699), mRNA Transient receptor potential cation channel, subfamily M, member 1	488699	XM_545816	42751	chr3:40803888	3
35	PREDICTED: Canis familiaris similar to carboxypeptidase X 2 (M14 family) (LOC486927), mRNA Carboxypeptidase X (M14 family), member 2	486927	XM_544057	40602 [**]	chr28:36242257	3
36	PREDICTED: Canis familiaris similar to Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17), transcript variant 1 (LOC474508), mRNA DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	474508	XM_531736	1218	chr10:29368660	3
37	PREDICTED: Canis familiaris similar to Peptidyl-prolyl cis-trans isomerase B precursor (PPIase) (Rotamase) (Cyclophilin B) (S-cyclophilin) (SCYLP) (CYP-S1), transcript variant 1 (LOC478337), mRNA Peptidylprolyl isomerase B (cyclophilin B)	478337	XM_535510	10271	chr30:31650047	3
38	PREDICTED: Canis familiaris similar to reticulon 4 isoform C, transcript variant 1 (LOC474598), mRNA Reticulon 4	474598	XM_531828	39607	chr10:59030728	3
39	PREDICTED: Canis familiaris ATPase, Ca++ transporting, plasma membrane 1, transcript variant 3 (ATP2B1), mRNA ATPase, Ca++ transporting, plasma membrane 1	403480	XM_847328	20103	chr15:33562868	3
40	PREDICTED: Canis familiaris similar to Creatine kinase M-type (Creatine kinase, M chain) (M-CK) (LOC476435), mRNA Creatine kinase, muscle	476435	XM_533641	39682	chr1:113107599	3
41	PREDICTED: Canis familiaris similar to transmembrane emp24 protein transport domain containing 9, transcript variant 1 (LOC481444), mRNA Transmembrane emp24 protein transport domain containing 9	481444	XM_538565	40531	chr11:6513350	3
42	Canis lupus familiaris guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 (GNAT1), mRNA Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1	403613	NM_001003068	3474	chr20:42128830	3
43	PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 1 (RPS3A), mRNA Ribosomal protein S3A Similar to ribosomal protein S3a	403677	XM_534275	3544 44482	chr15:52078368	3
44	PREDICTED: Canis familiaris similar to heat shock protein 1, beta, transcript variant 4 (LOC474919), mRNA Similar to heat shock protein 1, beta Similar to heat shock protein 1, beta	474919	XM_860921	39181 43135	chr12:15664141 chr2:3023664	3
45	Canis lupus familiaris phosducin (PDC), mRNA Phosducin	403624	NM_001003076	1202	chr7:22463511	3
46	PREDICTED: Canis familiaris similar to laminin, alpha 4 precursor (LOC475034), mRNA Laminin, alpha 4	475034	XM_532269	3060	chr12:71584644	3
47	PREDICTED: Canis familiaris similar to glycoprotein (transmembrane) nmb isoform b precursor, transcript variant 2 (LOC482355), mRNA Glycoprotein (transmembrane) nmb	482355	XM_539472	23699	chr14:39892807	3
48	Transcribed locus, strongly similar to NP_037192.1 inhibitor of DNA binding 2 [Rattus norvegicus]			44726	chr17:8931041	3
49	PREDICTED: Canis familiaris similar to acetyl-coenzyme A acyltransferase 2 (LOC490568), mRNA Similar to acetyl-coenzyme A acyltransferase 2 Transcribed locus, strongly similar to NP_803421.1 acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) [Mus musculus]	490568	XM_547690	4478 46300		2
50	PREDICTED: Canis familiaris similar to multiple coagulation factor deficiency 2 (LOC474582), mRNA Multiple coagulation factor deficiency 2	474582	XM_531811	21052	chr10:52218410	2
51	PREDICTED: Canis familiaris proteasome alpha subunit type 7 (XAPC7), mRNA Proteasome (prosome, macropain) subunit, alpha type, 7	404305	XM_534472	3902	chr24:49231393	2
52	PREDICTED: Canis familiaris similar to Protein tyrosine phosphatase type IVA protein 2 (Protein-tyrosine phosphatase 4a2) (Protein-tyrosine phosphatase of regenerating liver-2) (PRL-2), transcript variant 1 (LOC609835), mRNA Protein tyrosine phosphatase type IVA, member 2	609835	XM_846983	17932	chr2:72129278	2
53	PREDICTED: Canis familiaris similar to Myosin regulatory light chain 2, nonsarcomeric (Myosin RLC), transcript variant 1 (LOC607207), mRNA Similar to Myosin regulatory light chain 2, nonsarcomeric (Myosin RLC) Similar to myosin regulatory light polypeptide 9 isoform b	607207	XM_843746	35560 40174	chr7:72907413	2
54	PREDICTED: Canis familiaris similar to serine/threonine protein phosphatase with EF-hand motifs 2 isoform a (LOC487812), mRNA Protein phosphatase, EF-hand calcium binding domain 2	487812	XM_544934	41235	chr32:3407579	2
55	PREDICTED: Canis familiaris similar to membrane component chromosome 11 surface marker 1 isoform 1, transcript variant 2 (LOC607420), mRNA Cell cycle associated protein 1	607420	XM_853016	1500	chr18:36716354	2
56	PREDICTED: Canis familiaris similar to calmodulin 1, transcript variant 1 (LOC474584), mRNA Calmodulin 2 (phosphorylase kinase, delta)	474584	XM_531813	731	chr10:52425376	2
57	Bos taurus transducer of ERBB2, 2 (TOB2), mRNA Transducer of ERBB2, 2	507934	NM_001083387	43015	chr10:26891036	2
58	PREDICTED: Canis familiaris similar to ubiquitin specific protease 32, transcript variant 1 (LOC480590), mRNA Ubiquitin specific peptidase 32	480590	XM_537710	23748	chr9:39627453	2
59	PREDICTED: Canis familiaris similar to FK506-binding protein 8 (LOC484819), mRNA FK506 binding protein 8, 38kDa	484819	XM_541935	4497	chr20:47505011	2
60	PREDICTED: Canis familiaris similar to CG2747-PB, isoform B, transcript variant 1 (LOC483033), mRNA HEAT repeat containing 5B	483033	XM_540148	23242	chr17:32482277	2
61	PREDICTED: Canis familiaris similar to SET and MYND domain containing protein 2 (HSKM-B) (LOC480026), mRNA SET and MYND domain containing 2	480026	XM_537149	4357	chr7:15285692	2
62	PREDICTED: Canis familiaris similar to SPARC precursor (Secreted protein acidic and rich in cysteine) (Osteonectin) (ON) (Basement-membrane protein 40) (BM-40) (LOC612159), mRNA Secreted protein, acidic, cysteine-rich (osteonectin)	612159	XM_849889	1482	chr4:60884753	2
63	Canis lupus familiaris selenoprotein P, plasma, 1 (SEPP1), mRNA Selenoprotein P, plasma, 1	479346	NM_001115118	39216	chr4:70155596	2
64	PREDICTED: Canis familiaris RAS oncogene family-like member RAB2, transcript variant 1 (RAB2L), mRNA Ral guanine nucleotide dissociation stimulator-like 2	481739	XM_538860	11998	chr12:5735414	2
65	PREDICTED: Canis familiaris similar to Methionine-R-sulfoxide reductase B (LOC608357), mRNA Methionine sulfoxide reductase B2	608357	XM_845365	10136	chr2:13026248	2
66	PREDICTED: Canis familiaris similar to talin 1, transcript variant 2 (LOC474759), mRNA Talin 1	474759	XM_531990	12147	chr11:55266848	2
67	Canis lupus familiaris clusterin (CLU), mRNA Clusterin	442971	NM_001003370	1254	chr25:32981306	2
68	Canis lupus familiaris paired box 6 (PAX6), mRNA Paired box 6	483441	NM_001097544	21648	chr18:38688136	2
69	PREDICTED: Canis familiaris similar to calmodulin regulated spectrin-associated protein 1-like 1 (LOC490247), mRNA Calmodulin regulated spectrin-associated protein 1-like 1	490247	XM_547368	23437	chr7:5277024	2
70	PREDICTED: Canis familiaris similar to neutral sphingomyelinase (N-SMase) activation associated factor (LOC477892), mRNA Neutral sphingomyelinase (N-SMase) activation associated factor	477892	XM_535084	19656	chr29:12386274	2
71	PREDICTED: Canis familiaris similar to MAF1 protein, transcript variant 1 (LOC482087), mRNA MAF1 homolog (S. cerevisiae) Transcribed locus, strongly similar to NP_001014107.1 repressor of RNA polymerase III transcription MAF1 [Rattus norvegicus]	482087	XM_539208	17967 46420	chr13:40629209	2
72	PREDICTED: Canis familiaris similar to FK506-binding protein 4 (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (p59 protein) (HSP binding immunophilin) (HBI) (FKBP52 protein) (52 kDa FK506 binding protein) (FKBP59) (LOC477726), mRNA FK506 binding protein 4, 59kDa	477726	XM_534923	14166	chr27:44981346	2
73	PREDICTED: Canis familiaris similar to Ornithine decarboxylase antizyme (ODC-Az) (LOC476749), mRNA Ornithine decarboxylase antizyme 1	476749	XM_533955	39486	chr20:59910208	2
74	Canis lupus familiaris peripherin 2 (retinal degeneration, slow) (PRPH2), mRNA Peripherin 2 (retinal degeneration, slow)	403972	NM_001003289	3520	chr12:14303059	2
75	PREDICTED: Canis familiaris similar to SPARC-like protein 1 precursor (High endothelial venule protein) (Hevin) (MAST 9), transcript variant 1 (LOC478470), mRNA SPARC-like 1 (mast9, hevin)	478470	XM_535648	14828	chr32:13875246	2
76	PREDICTED: Canis familiaris similar to glyoxylase 1 (LOC474894), mRNA Glyoxalase I	474894	XM_532129	39848	chr12:10585417	2
77	Sus scrofa splicing factor, arginine/serine-rich 11 (LOC733656), mRNA Splicing factor, arginine/serine-rich 11	733656	NM_001044587	9497	chr6:78541484	2
78	Canis lupus familiaris glutamate-ammonia ligase (glutamine synthetase) (GLUL), mRNA Glutamate-ammonia ligase (glutamine synthetase)	403443	NM_001002965	1407	chr7:18698668	2
79	PREDICTED: Canis familiaris similar to glycoprotein M6A isoform 1, transcript variant 1 (LOC475641), mRNA Glycoprotein M6A	475641	XM_532853	37554	chr16:56812016	2
80	PREDICTED: Canis familiaris similar to nuclear transcription factor, X-box binding 1 isoform 2, transcript variant 2 (LOC481581), mRNA Nuclear transcription factor, X-box binding 1	481581	XM_538703	39271	chr11:53444709	2
81	PREDICTED: Macaca mulatta similar to cytokeratin type II (LOC699682), mRNA Transcribed locus, moderately similar to NP_476429.2 keratin 3 [Homo sapiens]	699682	XM_001098580	46657	chr27:5328301	2
82	Sus scrofa translocation protein 1 (TLOC1), mRNA Translocation protein 1 Similar to translocation protein 1	100125961	NM_001105305	1429 43036	chr34:37563668	2
83	PREDICTED: Canis familiaris similar to solute carrier family 38, member 2 (LOC486596), mRNA Solute carrier family 38, member 2	486596	XM_543722	39341	chr27:11080254	2
84	PREDICTED: Canis familiaris similar to DEAD-box protein 3, X-chromosomal (Helicase-like protein 2) (HLP2) (DEAD-box, X isoform), transcript variant 1 (LOC480886), mRNA DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	480886	XM_538003	7069	chrX:35723129	2
85	Sus scrofa mRNA, clone:ITT010103A03, expressed in intestine Transcribed locus		AK231590	39892 [**]	chr10:33749589	2
86	Canis lupus familiaris prostaglandin D2 synthase 21kDa (brain) (PTGDS), mRNA Prostaglandin D2 synthase 21kDa (brain)	403740	NM_001003131	39564	chr9:51983299	2
87	PREDICTED: Canis familiaris phosphate carrier, transcript variant 1 (SLC25A3), mRNA Solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3	475436	XM_532660	27002	chr15:41002964	2
88	PREDICTED: Canis familiaris similar to Acyl-CoA dehydrogenase, medium-chain specific, mitochondrial precursor (MCAD) (LOC490207), mRNA Acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain	490207	XM_547328	1658	chr6:73916003	2
89	Canis lupus familiaris decorin (DCN), mRNA Decorin	403904	NM_001003228	3762	chr15:34856802	2
90	Canis lupus familiaris ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 (ATP2A2), mRNA ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	403878	NM_001003214	97	chr26:11218258	2
91	PREDICTED: Canis familiaris similar to Transcription factor jun-B (LOC484927), mRNA Jun B proto-oncogene	484927	XM_542043	17974	chr20:52362409	2
92	PREDICTED: Canis familiaris similar to N6-DNA-methyltransferase isoform 1 (LOC487715), mRNA N-6 adenine-specific DNA methyltransferase 1 (putative)	487715	XM_544839	41257	chr31:26917018	2
93	PREDICTED: Canis familiaris similar to Heterogeneous nuclear ribonucleoprotein G (hnRNP G) (RNA binding motif protein, X chromosome) (Glycoprotein p43), transcript variant 4 (LOC481063), mRNA RNA binding motif protein, X-linked	481063	XM_861318	1583	chr8:48829386 chrX:110246156	2
94	PREDICTED: Canis familiaris similar to Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial precursor (Complex III subunit II), transcript variant 1 (LOC479815), mRNA Similar to Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial precursor (Complex III subunit II)	479815	XM_536942	1425	chr6:26673500	2
95	PREDICTED: Canis familiaris eukaryotic translation elongation factor 1 alpha 1, transcript variant 1 (EEF1A1), mRNA Similar to eukaryotic translation elongation factor 1 alpha 2	403506	XM_532203	39097 [**]	chr15:32304018 chr2:65266145 chr3:63719945 chr31:16900992 chr4:70900949	2
96	Bos taurus methionine adenosyltransferase II, alpha (MAT2A), mRNA Methionine adenosyltransferase II, alpha	527403	NM_001101131	1837	chr17:42590259	2
97	PREDICTED: Canis familiaris similar to protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta), transcript variant 1 (LOC479248), mRNA Protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform	479248	XM_536390	19761	chr4:27194840	2
98	PREDICTED: Canis familiaris similar to Reticulocalbin 1 precursor (LOC475952), mRNA Transcribed locus, strongly similar to NP_033063.1 reticulocalbin 1 [Mus musculus]	475952	XM_533162	6389	chr18:38393443	2
99	PREDICTED: Canis familiaris similar to Signal recognition particle receptor alpha subunit (SR-alpha) (Docking protein alpha) (DP-alpha) (LOC489293), mRNA Signal recognition particle receptor ('docking protein')	489293	XM_546411	6701	chr5:11250704	2
100	PREDICTED: Canis familiaris similar to Integrin beta-5 precursor (LOC608977), mRNA Integrin, beta 5	608977	XM_846152	18366	chr33:30838155	2

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