NbLib0104: NEI chicken adult whole eye unnormalized (naw)

Last GRIST date: 10/21/2008

View this library: Full List \| Indexed by Chromosomal Position \| Indexed by GO Term \| Tab Delimited	Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display.	View All Data \| << Previous Page \| Next Page >>

Group#	Description	Entrez Gene Id	GenBank	UniGene (Build Gga #40)	Chromosomal Pos. (BLAT)	Num. Clones
1	Gallus gallus d-cry (LOC396498), mRNA D-cry	396498	NM_205501	4293	chr19:4914785	108
2	Gallus gallus glyceraldehyde-3-phosphate dehydrogenase (GAPDH), mRNA Similar to glyceraldehyde 3-phosphate dehydrogenase Glyceraldehyde-3-phosphate dehydrogenase	374193	NM_204305	41270 6383	chr1:80091302	91
3	Gallus gallus finished cDNA, clone ChEST663d16 Transcribed locus, moderately similar to XP_001096194.1 PREDICTED: similar to Collagen alpha-1(I) chain precursor [Macaca mulatta]		CR390559	4992		40
4	Gallus gallus pyruvate kinase, muscle (PKM2), mRNA Pyruvate kinase, muscle	396456	NM_205469	4299	chr10:962510	36
5	Chicken type I collagen alpha-1 (alpha1(I)) chain mRNA, partial cds Collagen alpha-1 chain	396511	M17607	43371		32
6	Gallus gallus crystallin, alpha A (CRYAA), mRNA Crystallin, alpha A	418546	NM_001030797	32115	chr1:113199272	28
7	PREDICTED: Gallus gallus tubulin, alpha 6 (TUBA6), mRNA Tubulin, alpha 1c	429035	XM_426592	35012 [**]	chr7:23761320 chrUn_random:50919907	24
8	Gallus gallus lactotransferrin (LTF), mRNA Lactotransferrin	396241	NM_205304	2551	chr9:5638485	23
9	Gallus gallus eukaryotic translation elongation factor 1 alpha 1 (EEF1A1), mRNA Eukaryotic translation elongation factor 1 alpha 1	373963	NM_204157	34328	chr3:84254984	22
10	Gallus gallus crystallin, beta B2 (CRYBB2), mRNA Crystallin, beta B2	396088	NM_205175	646	chr15:7214863	22
11	Gallus gallus opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan) (OPN1LW), mRNA Opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan)	396421	NM_205440	716	chrUn_random:48544379	21
12	Gallus gallus arrestin 3, retinal (ARR3), mRNA Arrestin 3, retinal	769109	NM_001097533	34427	chr4:1220630	20
13	Gallus gallus actin, alpha 1, skeletal muscle (ACTA1), mRNA Actin, alpha 1, skeletal muscle	421534	NM_001031063	46829	chr3:41877288	20
14	Gallus gallus ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 (ATP2A1), mRNA ATPase, Ca++ transporting, cardiac muscle, fast twitch 1	396528	NM_205519	877		19
15	Gallus gallus ubiquitin C (UBC), mRNA Ubiquitin C Ubiquitin	396425	NM_001079474	39142 47488	chr19:6526464	18
16	Gallus gallus secreted protein, acidic, cysteine-rich (osteonectin) (SPARC), mRNA Secreted protein, acidic, cysteine-rich (osteonectin)	386571	NM_204410	2613 [**]	chr13:12999241	18
17	Gallus gallus apolipoprotein A-I (APOA1), mRNA Apolipoprotein A-I	396536	NM_205525	34313	chr24:5237132	16
18	PREDICTED: Gallus gallus similar to aldolase C (LOC771702), mRNA Similar to aldolase C	771702	XM_001234949	43936		16
19	Gallus gallus collagen, type II, alpha 1 (COL2A1), mRNA Collagen, type II, alpha 1	395069	NM_204426	2839	chrUn_random:31472543	15
20	PREDICTED: Gallus gallus alpha 1 type III collagen (COL3A1), mRNA Collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)	396340	XM_421847	42140	chr7:586687	14
21	PREDICTED: Gallus gallus similar to G-protein beta-subunit (LOC427945), mRNA Guanine nucleotide binding protein (G protein), beta polypeptide 3	427945	XM_425517	34418	chr1:80401406	14
22	Messenger fragment for chicken pro-alpha-2 (I) collagen Collagen, type I, alpha 2	420564	V00390	42179	chr2:23566189	13
23	Gallus gallus M-CK (LOC396507), mRNA M-CK	396507	NM_205507	4308	chr5:53555290	13
24	Gallus gallus enolase 1, (alpha) (ENO1), mRNA Enolase 1, (alpha)	396017	NM_205120	1383	chr21:3199577	13
25	PREDICTED: Gallus gallus alpha-1 collagen (I) (LOC395532), partial mRNA Alpha-1 collagen (I)	395532	XM_423116	2073		13
26	Gallus gallus apolipoprotein D (APOD), mRNA Decorin Apolipoprotein D	424893	NM_001011692	1719 5318	chr1:45908661 chr9:13772464	12
27	Gallus gallus ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide (ATP5B), nuclear gene encoding mitochondrial protein, mRNA ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide Similar to mitochondrial ATP synthase, H+ transporting F1 complex beta subunit	426673	NM_001031391	22609 39004	chrE22C19W28_E50C23:894183 chrUn_random:9509749	12
28	Gallus gallus C-type lectin domain family 3, member B (CLEC3B), mRNA C-type lectin domain family 3, member B	395386	NM_204666	3652	chr2:43108483	11
29	PREDICTED: Gallus gallus similar to 5A11/Basigin-2 (LOC770363), mRNA Similar to 5A11/Basigin-2	770363	XM_001233699	39023	chr28:2166753	11
30	Gallus gallus phosphoglycerate mutase 1 (brain) (PGAM1), mRNA Phosphoglycerate mutase 1 (brain)	428969	NM_001031556	6033	chr6:23773692	11
31	PREDICTED: Gallus gallus myosin, heavy chain 2, skeletal muscle, adult (MYH2), mRNA Hypothetical protein LOC768751 Myosin, heavy chain 8, skeletal muscle, perinatal Myosin, heavy chain 4, skeletal muscle	417306	XM_415578	25156 27138 27660	chr18:366051	11
32	Gallus gallus crystallin, beta A2 (CRYBA2), mRNA Crystallin, beta A2	373999	NM_204179	656	chr7:23908411	10
33	Gallus gallus tubulin, beta 2C (TUBB2C), mRNA Tubulin, beta 2C	417255	NM_001080860	22905	chr17:2277509	10
34	Gallus gallus eukaryotic translation elongation factor 1 alpha 2 (EEF1A2), mRNA Eukaryotic translation elongation factor 1 alpha 2	419244	NM_001032398	33759	chr20:8992641	10
35	Gallus gallus crystallin, beta A1 (CRYBA1), mRNA Crystallin, beta A1	396499	NM_205502	860	chr19:5917534	10
36	PREDICTED: Gallus gallus similar to Glutathione peroxidase 3 precursor (GSHPx-3) (GPx-3) (Plasma glutathione peroxidase) (GSHPx-P) (LOC427638), mRNA Similar to Glutathione peroxidase 3 precursor (GSHPx-3) (GPx-3) (Plasma glutathione peroxidase) (GSHPx-P)	427638	XR_027034	4896 [**]	chr13:13133783	9
37	Gallus gallus actin, beta (ACTB), mRNA Actin, beta	396526	NM_205518	6076	chrUn_random:20438261	9
38	Gallus gallus ribosomal protein L4 (RPL4), mRNA Ribosomal protein L4	415551	NM_001007479	4523	chr10:20669403	9
39	Gallus gallus enolase 2 (gamma, neuronal) (ENO2), mRNA Enolase 2 (gamma, neuronal)	395689	NM_204876	4132	chr1:80444813	9
40	Gallus gallus heat shock 70kDa protein 8 (HSPA8), mRNA Heat shock 70kDa protein 8	395853	NM_205003	4555	chr24:3111108	9
41	Gallus gallus keratin 15 (KRT15), mRNA Keratin 15	408040	NM_001001312	3391	chr27:4198218	9
42	Gallus gallus crystallin, beta B3 (CRYBB3), mRNA Crystallin, beta B3	396108	NM_205191	655	chr15:7210748	8
43	Gallus gallus vimentin (VIM), mRNA Vimentin	420519	NM_001048076	41907	chr2:19731176	8
44	Gallus gallus eukaryotic translation initiation factor 4 gamma, 2 (EIF4G2), transcript variant 2, mRNA Cyclin D1 Eukaryotic translation initiation factor 4 gamma, 2	395905	NM_001043349	3039 4138	chr5:18709724	8
45	Gallus gallus heat shock protein 90kDa alpha (cytosolic), class A member 1 (HSP90AA1), mRNA Heat shock protein 90kDa alpha (cytosolic), class A member 1	423463	NM_001109785	6482	chr5:51987263	8
46	Gallus gallus gelsolin (GSN), mRNA Gelsolin	395774	NM_204934	4451	chr17:9115181	8
47	Gallus gallus adaptor-related protein complex 2, mu 1 subunit (AP2M1), mRNA Adaptor-related protein complex 2, mu 1 subunit	770246	NM_001079494	15365	chr9:16927805	8
48	Gallus gallus rhodopsin (RDP1), mRNA Rhodopsin Similar to Rhodopsin	751791	NM_001030606	33507 35243	chr12:20166306	8
49	Gallus gallus lactate dehydrogenase A (LDHA), mRNA Lactate dehydrogenase A	396221	NM_205284	4398	chr5:13644513	8
50	Gallus gallus crystallin, beta B1 (CRYBB1), mRNA Crystallin, beta B1	374000	NM_204180	861	chr15:7401190	8
51	PREDICTED: Gallus gallus hypothetical protein LOC768618 (LOC768618), mRNA NDRG family member 4	768618	XM_001231664	35108	chr11:349035	7
52	Gallus gallus phosphoglycerate kinase 1 (PGK1), mRNA Phosphoglycerate kinase 1	395833	NM_204985	8606	chr4:13036124	7
53	Gallus gallus silver homolog (mouse) (SILV), mRNA Silver homolog (mouse)	396007	NM_205112	592	chrE22C19W28_E50C23:488516	7
54	Gallus gallus retinaldehyde binding protein 1 (RLBP1), mRNA Retinaldehyde binding protein 1	415492	NM_001024694	12361	chr10:14662101	7
55	Gallus gallus nuclear factor related to kappaB binding protein (NFRKB), mRNA Nuclear factor related to kappaB binding protein	419727	NM_001006317	9347	chr24:1464677 chr6:32742963	7
56	Gallus gallus finished cDNA, clone ChEST216o6 Zinc finger protein 512B Collagen, type I, alpha 2 Finished cDNA, clone ChEST216o6		CR732910	13141 34208 38851	chr2:23541009	7
57	Gallus gallus creatine kinase, brain (CKB), mRNA Creatine kinase, brain	396248	NM_205310	2722	chr5:52835241	7
58	Gallus gallus eukaryotic translation initiation factor 4A, isoform 2 (EIF4A2), mRNA Eukaryotic translation initiation factor 4A, isoform 2	395232	NM_204549	4580	chr9:17295313	7
59	Gallus gallus quiescin Q6 sulfhydryl oxidase 1 (QSOX1), mRNA Quiescin Q6 sulfhydryl oxidase 1	373914	NM_204125	148	chr8:6288926	7
60	Gallus gallus ferritin, heavy polypeptide 1 (FTH1), mRNA Ferritin, heavy polypeptide 1	395970	NM_205086	4390	chr5:18042915	7
61	Gallus gallus tropomyosin 3 (TPM3), mRNA Tropomyosin 3	396430	NM_205446	4975 [**]	chrZ:8546854	6
62	Gallus gallus cone-type transducin alpha subunit (LOC395425), mRNA Cone-type transducin alpha subunit	395425	NM_204690	230		6
63	Gallus gallus prosaposin (PSAP), mRNA Prosaposin	395602	NM_204811	4403	chr6:13024333	6
64	Chicken tropoelastin mRNA, complete cds Elastin (supravalvular aortic stenosis, Williams-Beuren syndrome)	396441	M15889	822	chr19:728472	6
65	Gallus gallus solute carrier family 6 (neurotransmitter transporter, glycine), member 9 (SLC6A9), mRNA Solute carrier family 6 (neurotransmitter transporter, glycine), member 9	424576	NM_001031279	5405	chr8:21096123	6
66	Gallus gallus basement membrane-specific heparan sulfate proteoglycan core protein (HSPG), mRNA Heparan sulfate proteoglycan 2 Basement membrane-specific heparan sulfate proteoglycan core protein	414739	NM_001001876	47557 7471	chr21:6710532	6
67	Gallus gallus Y box binding protein 1 (YBX1), mRNA Y box binding protein 1	386575	NM_204414	4145	chr21:6593071	6
68	Gallus gallus eukaryotic translation elongation factor 2 (EEF2), mRNA Eukaryotic translation elongation factor 2	396325	NM_205368	4327	chr28:1056378	6
69	Gallus gallus pleckstrin homology domain containing, family B (evectins) member 1 (PLEKHB1), mRNA Pleckstrin homology domain containing, family B (evectins) member 1	419064	NM_001012546	1796	chr1:200437699	5
70	Gallus gallus solute carrier family 2 (facilitated glucose transporter), member 1 (SLC2A1), mRNA Solute carrier family 2 (facilitated glucose transporter), member 1	396130	NM_205209	1040	chr21:6659196	5
71	Gallus gallus ribosomal protein, large, P0 (RPLP0), mRNA Ribosomal protein, large, P0	395835	NM_204987	33624	chr15:9699608	5
72	PREDICTED: Gallus gallus similar to hypothetical protein LOC196463 (LOC417031), misc RNA	417031	XR_026761		chr15:12895468	5
73	PREDICTED: Gallus gallus ribosomal protein SA, transcript variant 2 (RPSA), mRNA Ribosomal protein SA	395181	XM_418817	34355	chr2:44379229	5
74	Gallus gallus solute carrier family 16, member 1 (monocarboxylic acid transporter 1) (SLC16A1), mRNA Solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	419875	NM_001006323	38993	chr26:3441805	5
75	Gallus gallus transforming growth factor, beta-induced, 68kDa (TGFBI), mRNA Transforming growth factor, beta-induced, 68kDa Similar to RGD-CAP	395897	NM_205036	2582 40324	chr13:15507293 chr13_random:2561	5
76	Gallus gallus glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) (GOT2), nuclear gene encoding mitochondrial protein, mRNA Glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)	396533	NM_205523	4425	chr11:1454196	5
77	PREDICTED: Gallus gallus hypothetical protein LOC768877 (LOC768877), mRNA S-antigen; retina and pineal gland (arrestin)	768877	XM_001231685	34202	chr9:2143132	5
78	Gallus gallus carbonic anhydrase II (CA2), mRNA Carbonic anhydrase II	396257	NM_205317	3986	chr2:127587703	5
79	PREDICTED: Gallus gallus similar to cartilage leucine-rich protein (LOC769665), mRNA Similar to cartilage leucine-rich protein	769665	XM_001232035	33560	chr18:10311488	5
80	Gallus gallus transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) (TGM2), mRNA Transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) Lectin, mannose-binding, 1	396432	NM_205448	31956 42338	chr20:10329829 chrZ:819286	5
81	Gallus gallus integral membrane protein 2A (ITM2A), mRNA Integral membrane protein 2A	422145	NM_001012571	4793	chr4:1454968	5
82	Gallus gallus Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 (CITED4), mRNA Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	395465	NM_204718	3412	chr23:1357003	5
83	Gallus gallus ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle (ATP5A1), nuclear gene encoding mitochondrial protein, mRNA ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	374159	NM_204286	9720	chrZ:1943169	5
84	Gallus gallus finished cDNA, clone ChEST730p3 Finished cDNA, clone ChEST730p3		CR389336	17390	chr27:3390750	5
85	Gallus gallus prostaglandin D2 synthase 21kDa (brain) (PTGDS), mRNA Prostaglandin D2 synthase 21kDa (brain)	374110	NM_204259	3350		5
86	Gallus gallus enolase (LOC396016), mRNA Enolase	396016	NM_205119	4297		5
87	Gallus gallus ribosomal protein L7a (RPL7A), mRNA Ribosomal protein L7a Transcribed locus, strongly similar to NP_956341.1 ribosomal protein L7a [Danio rerio]	417158	NM_001004379	4080 44118	chr17:7532204	4
88	Gallus gallus tubulin, beta 2B (TUBB2B), mRNA Tubulin, beta 2B Similar to tubulin, beta 3	420883	NM_001004400	1815 40506	chr2:67484149	4
89	Gallus gallus troponin T type 3 (skeletal, fast) (TNNT3), mRNA Troponin T type 3 (skeletal, fast)	395761	NM_204922	39779	chr5:15112487	4
90	Gallus gallus finished cDNA, clone ChEST379c20 Calreticulin		BX934442	38987		4
91	Gallus gallus H3 histone, family 3B (H3.3B) (H3F3B), mRNA H3 histone, family 3B (H3.3B)	396233	NM_205296	4770	chr18:4698467	4
92	Gallus gallus vitronectin (VTN), mRNA Vitronectin	395935	NM_205061	2758	chr19:5611539	4
93	Gallus gallus finished cDNA, clone ChEST240e14 Fraser syndrome 1 Finished cDNA, clone ChEST240e14 Finished cDNA, clone ChEST471p16		CR385973	14594 47178 47556		4
94	Gallus gallus laminin, beta 2 (laminin S) (LAMB2), mRNA Laminin, beta 2 (laminin S)	373980	NM_204166	4292	chr12:11841004	4
95	Gallus gallus finished cDNA, clone ChEST337c15 Aldolase A		BX929868	4982		4
96	Gallus gallus ribosomal protein L3 (RPL3), mRNA Similar to ribosomal protein L3 Ribosomal protein L3	418016	NM_001006241	45887 990	chr1:52605292	4
97	Gallus gallus high density lipoprotein binding protein (vigilin) (HDLBP), mRNA High density lipoprotein binding protein (vigilin)	395984	NM_205096	9199	chr9:6013641	4
98	Gallus gallus T/Asp718#1 (LOC769798), mRNA T/Asp718#1	769798	NM_001114505	46715	chr10:1790959	4
99	PREDICTED: Gallus gallus similar to regulator of G-protein signalling 5 (LOC769998), mRNA Regulator of G-protein signalling 5	769998	XM_001233313	9757	chr8:3711545	4
100	PREDICTED: Gallus gallus similar to pol (LOC770705), mRNA Similar to pol Similar to C-type lectin-like receptor	770705	XM_001231588	42049 45361	chr1:20102 chrUn_random:52256904	4

<< Previous Page | Next Page >>
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28

Disclaimer: Some links from this site may link you to sites outside of NEIBank. NEIBank is not responsible for the content of any non-NEIBank site.

Please send questions/comments on NEIBank scientific content to neibank.comments@nei.nih.gov.
Technical questions/comments regarding the NEIBank website can be sent to neibank.webmaster@nei.nih.gov.