NbLib0114: NEI rabbit trigeminal nerve unnormalized (nbc)

Last GRIST date: 10/16/2008

View this library: Full List | Indexed by Chromosome | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display. View All Data | << Previous Page | Next Page >>
Group#Description Entrez Gene IdGenBankUniGene (Build Ocu #11) ChromosomeNum. Clones
1
  • Oryctolagus cuniculus elongation factor 1 alpha (RABEFLA2), mRNA
  • Elongation factor 1 alpha
    		• 100009189
    		NM_001082339   1580  
    		   28
    2
  • Oryctolagus cuniculus hemoglobin, beta (HBB), mRNA
  • Hemoglobin, beta
    		• 100009084
    		NM_001082260   105  
    		   24
    3
  • PREDICTED: Canis familiaris similar to neurofilament, light polypeptide 68kDa, transcript variant 4 (LOC477378), mRNA
    		• 477378
    		XM_853574       24
    4
  • PREDICTED: Macaca mulatta similar to Tubulin alpha-2 chain (Alpha-tubulin 2), transcript variant 1 (K-ALPHA-1), mRNA
  • Transcribed locus, strongly similar to XP_686462.1 PREDICTED: similar to alpha-tubulin isotype M-alpha-2 isoform 1 [Danio rerio]
  • Transcribed locus, strongly similar to XP_688383.1 PREDICTED: similar to tubulin alpha isoform 1 [Danio rerio]
    		• 709643
    		XM_001106732   5865 [**] 
    6530 [**] 
    		   23
    5
  • PREDICTED: Pan troglodytes microtubule-associated protein 1B (MAP1B), mRNA
    		• 450137
    		XM_517716       22
    6
  • Transcribed locus, strongly similar to NP_006588.1 heat shock 70kDa protein 8 isoform 1 [Homo sapiens]
  • Transcribed locus, strongly similar to NP_001103873.1 heat shock protein 8 [Danio rerio]
    		•     6517  
    671  
    		   21
    7
  • Rabbit ferritin H-chain mRNA, 3' end
  • Ferritin, heavy polypeptide 1
    		• 100009597
    		M63912   1521  
    		   17
    8
  • Oryctolagus cuniculus eukaryotic translation initiation factor 4 gamma, 2 (EIF4G2), mRNA
  • Eukaryotic translation initiation factor 4 gamma, 2
    		• 100009236
    		NM_001082379   6219  
    		   16
    9
  • Ovis aries calmodulin 2 (CALM2), mRNA
    		• 443230
    		NM_001009759       16
    10
  • Oryctolagus cuniculus apolipoprotein E (APOE), mRNA
  • Apolipoprotein E
    		• 100009337
    		NM_001082643   6224  
    		   15
    11
  • PREDICTED: Pan troglodytes ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase), transcript variant 2 (UCHL1), mRNA
    		• 461185
    		XM_001147452       14
    12
  • Oryctolagus cuniculus glyceraldehyde-3-phosphate dehydrogenase (LOC100009074), mRNA
  • Glyceraldehyde-3-phosphate dehydrogenase
    		• 100009074
    		NM_001082253   87  
    		   13
    13
  • 97% protein similarity to: Alpha-enolase (2-phospho-D-glycerate hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1)
    		•         13
    14
  • Macaca fascicularis mRNA, clone QccE-14817: similar to Homo sapiens calmodulin 1 (phosphorylase kinase, delta) (CALM1), mRNA, NM_006888.2
    		•   AB220420       12
    15
  • Oryctolagus cuniculus gamma non-muscle actin (ACT-5), mRNA
  • Gamma non-muscle actin
    		• 100009272
    		NM_001101683   734  
    		   12
    16
  • 98% protein similarity to: annexin A2 [Bos taurus]
    		•         12
    17
  • PREDICTED: Pan troglodytes tyrosine 3/tryptophan 5 -monooxygenase activation protein, eta polypeptide, transcript variant 1 (YWHAH), mRNA
  • Transcribed locus, strongly similar to NP_037184.1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Rattus norvegicus]
    		• 458778
    		XM_001150958   1630  
    		   11
    18
  • PREDICTED: Equus caballus similar to hevin (LOC100052928), mRNA
    		• 100052928
    		XM_001496019       11
    19
  • Bos taurus tubulin, beta 2A (TUBB2A), mRNA
    		• 281555
    		NM_001003900       11
    20
  • O.cuniculus mRNA for neurofilament protein M
  • Neurofilament protein M
    		• 100009343
    		Z47378   3288  
    		   10
    21
  • PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 4A2, transcript variant 2 (LOC488118), mRNA
  • Transcribed locus, strongly similar to NP_001958.2 eukaryotic translation initiation factor 4A2 [Homo sapiens]
    		• 488118
    		XM_545242   550  
    		   10
    22
  • 85% protein similarity to: Thy-1 protein [Cavia porcellus]
    		•         10
    23
  • Oryctolagus cuniculus mitochondrial ATP synthase, H+ transporting F1 complex beta subunit (ATP5B) mRNA, partial cds; nuclear gene for mitochondrial product
  • Transcribed locus, strongly similar to NP_001026562.1 ATP synthase, H+ transporting, mitochondrial F1 complex, beta subunit [Gallus gallus]
    		•   DQ403105   5720  
    		   9
    24
  • PREDICTED: Canis familiaris similar to stathmin-like 2, transcript variant 1 (LOC477918), mRNA
    		• 477918
    		XM_535108       9
    25
  • Oryctolagus cuniculus USF2 (USF2) mRNA, partial cds
  • Upstream transcription factor 2, c-fos interacting
    		• 100008893
    		AY168774   6310  
    		   9
    26
  • PREDICTED: Pan troglodytes similar to putative polyubiquitin (UBQ10) (LOC459636), mRNA
    		• 459636
    		XR_024413       9
    27
  • Bos taurus peripheral myelin protein 22 (PMP22), mRNA
  • Transcribed locus, strongly similar to NP_058733.1 peripheral myelin protein 22 [Rattus norvegicus]
  • Transcribed locus
    		• 534497
    		NM_001101156   5880  
    6948  
    		   9
    28
  • 100% protein similarity to: 84 kDa heat shock protein [Rattus norvegicus]
    		•         9
    29
  • PREDICTED: Macaca mulatta similar to thymosin, beta 10, transcript variant 1 (LOC694305), mRNA
  • Transcribed locus
    		• 694305
    		XM_001082480   1321  
    		   8
    30
  • PREDICTED: Macaca mulatta vimentin (VIM), mRNA
    		• 705289
    		XM_001093658       8
    31
  • Oryctolagus cuniculus mRNA for alpha 2 type I collagen, partial cds
  • Alpha 2(I) procollagen
  • Alpha 2 type I collagen
    		• 100008997
    		D49399   6518 [**] 
    7316  
    		   8
    32
  • Oryctolagus cuniculus calpain, small subunit 1 (CAPNS1), mRNA
  • Calpain, small subunit 1
  • Endothelin-1
    		• 100009090
    		NM_001082264   2040  
    5758  
    		   8
    33
  • PREDICTED: Canis familiaris similar to Tubulin alpha-2 chain (Alpha-tubulin 2), transcript variant 3 (LOC608138), mRNA
  • Transcribed locus, strongly similar to XP_686462.1 PREDICTED: similar to alpha-tubulin isotype M-alpha-2 isoform 1 [Danio rerio]
  • Transcribed locus, strongly similar to XP_688383.1 PREDICTED: similar to tubulin alpha isoform 1 [Danio rerio]
  • Alpha-tubulin
    		• 608138
    		XM_856857   5865 [**] 
    6530 [**] 
    725  
    		   8
    34
  • Canis lupus familiaris neurofilament, heavy polypeptide 200kDa (NEFH), mRNA
  • Rabbit neurofilament-H mRNA, 5' end of cds
  • Rabbit neurofilament-H
    		• 442940
    		NM_001003352   2014 [**] 
    2015 [**] 
    		   7
    35
  • Oryctolagus cuniculus alpha-hemoglobin (HBA), mRNA
  • Alpha-hemoglobin
    		• 100009249
    		NM_001082389   6701  
    		   7
    36
  • Bos taurus synaptosomal-associated protein, 25kDa (SNAP25), mRNA
    		• 540853
    		NM_001076246       7
    37
  • Transcribed locus
    		•     5335  
    		   7
    38
  • Transcribed locus
  • Transcribed locus, strongly similar to NP_062250.1 tyrosine 3-monooxgenase/tryptophan 5-monooxgenase activation protein, beta polypeptide [Rattus norvegicus]
    		•     6666  
    911  
    		   7
    39
  • 96% protein similarity to: transmembrane protein 59 [Homo sapiens]
    		•         7
    40
  • Oryctolagus cuniculus pyruvate kinase mRNA, partial cds
  • Muscle pyruvate kinase
    		•   U44751   2156  
    		   6
    41
  • Bos taurus ornithine aminotransferase (gyrate atrophy) (OAT), nuclear gene encoding mitochondrial protein, mRNA
    		• 505323
    		NM_001034240       6
    42
  • Oryctolagus cuniculus ferritin light chain 2 (FTL2), mRNA
  • Ferritin light chain 2
    		• 100009254
    		NM_001101688   6196  
    		   6
    43
  • Oryctolagus cuniculus prion protein (PRP), mRNA
  • Prion protein
    		• 100008658
    		NM_001082021   6364  
    		   6
    44
  • Oryctolagus cuniculus proteolipid protein (PLP), mRNA
  • Proteolipid protein
    		• 100009169
    		NM_001082328   6287 [**] 
    		   6
    45
  • Oryctolagus cuniculus apolipoprotein D (APOD), mRNA
  • Apolipoprotein D
    		• 100009080
    		NM_001082258   1146  
    		   6
    46
  • Oryctolagus cuniculus osteonectin mRNA, partial cds
  • Secreted protein, acidic, cysteine-rich (osteonectin)
    		• 100009355
    		AF247647   6366  
    		   6
    47
  • Oryctolagus cuniculus aldolase A (ALDOA), mRNA
  • Aldolase A
    		• 100009055
    		NM_001082238   864  
    		   6
    48
  • PREDICTED: Macaca mulatta collagen type III alpha 1 (COL3A1), mRNA
  • Transcribed locus, moderately similar to XP_001163769.1 PREDICTED: similar to COL3A1 protein isoform 9 [Pan troglodytes]
    		• 574131
    		XM_001105968   243  
    		   6
    49
  • Rattus norvegicus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide (Ywhae), mRNA
  • Transcribed locus, strongly similar to NP_001006219.1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Gallus gallus]
  • Transcribed locus, strongly similar to NP_001006219.1 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Gallus gallus]
    		• 29753
    		NM_031603   5653  
    6944  
    		   6
    50
  • Transcribed locus, strongly similar to NP_957247.1 hypothetical protein LOC393928 [Danio rerio]
    		•     288  
    		   6
    51
  • Transcribed locus, strongly similar to NP_062615.1 stathmin 1 [Mus musculus]
    		•     5389  
    		   6
    52
  • Transcribed locus, weakly similar to NP_932165.1 periaxin isoform L [Mus musculus]
  • Transcribed locus, moderately similar to XP_541615.2 PREDICTED: similar to Periaxin [Canis familiaris]
    		•     4505  
    5327  
    		   6
    53
  • 99% protein similarity to: Ribosomal protein L3 [Bos taurus]
    		•         6
    54
  • 97% protein similarity to: PREDICTED: 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) [Pan troglodytes]
    		•         6
    55
  • 30% protein similarity to: predicted protein [Coprinopsis cinerea okayama7#130]
    		•         6
    56
  • Unidentified nbc21d08
    		•         6
    57
  • 83% protein similarity to: ribosomal protein S2 [Bos taurus]
    		•         6
    58
  • Oryctolagus cuniculus secreted phosphoprotein-1 precursor (OPN), mRNA
  • Secreted phosphoprotein-1 precursor
    		• 100008982
    		NM_001082194   2423  
    		   5
    59
  • PREDICTED: Macaca mulatta similar to ELAV-like 2 isoform 3, transcript variant 5 (LOC708195), mRNA
  • Transcribed locus
    		• 708195
    		XM_001106502   5879  
    		   5
    60
  • PREDICTED: Bos taurus similar to DnaJ (Hsp40) homolog, subfamily A, member 1 (LOC782779), mRNA
  • Transcribed locus, strongly similar to NP_032324.1 DnaJ (Hsp40) homolog, subfamily A, member 1 [Mus musculus]
  • Transcribed locus, strongly similar to NP_032324.1 DnaJ (Hsp40) homolog, subfamily A, member 1 [Mus musculus]
    		• 782779
    		XR_027633   1235  
    6943  
    		   5
    61
  • Oryctolagus cuniculus SNRPN upstream reading frame (SNURF), mRNA
  • Transcribed locus, strongly similar to NP_112379.1 small nuclear ribonucleoparticle-associated protein [Rattus norvegicus]
    		• 100009465
    		NM_001082714   5844  
    		   5
    62
  • PREDICTED: Macaca mulatta similar to keratin 7, transcript variant 1 (LOC697425), mRNA
    		• 697425
    		XM_001092185       5
    63
  • PREDICTED: Pan troglodytes adducin 1 (alpha), transcript variant 8 (ADD1), mRNA
    		• 740376
    		XM_001150573       5
    64
  • PREDICTED: Pan troglodytes similar to Tuba2 protein (LOC451479), mRNA
    		• 451479
    		XR_023021       5
    65
  • Oryctolagus cuniculus voltage-dependent anion channel 1 (VDAC1), mRNA
  • Voltage-dependent anion channel 1
    		• 100008751
    		NM_001082075   2411  
    		   5
    66
  • Oryctolagus cuniculus Na/K ATPase alpha 1 subunit mRNA, complete cds
  • Oryctolagus cuniculus partial mRNA for sarcolemmal sodium/potassium-ATPase alpha 1 (atp1a1 gene)
    		•   AF235024   2457  
    		   5
    67
  • Oryctolagus cuniculus CD59 homolog (LOC100009459), mRNA
  • CD59 homolog
    		• 100009459
    		NM_001082712   6407  
    		   5
    68
  • PREDICTED: Equus caballus similar to factor activating exoenzyme S (LOC100056060), mRNA
    		• 100056060
    		XM_001492988       5
    69
  • PREDICTED: Canis familiaris similar to Dynein intermediate chain 2, cytosolic (DH IC-2) (Cytoplasmic dynein intermediate chain 2), transcript variant 5 (LOC478797), mRNA
    		• 478797
    		XM_854736       5
    70
  • Xenopus laevis neuregulin 1 (nrg1-A), mRNA
    		• 373595
    		NM_001085594       5
    71
  • Rattus norvegicus polyubiquitin (Ubb), mRNA
  • Transcribed locus, strongly similar to NP_035794.1 ubiquitin B [Mus musculus]
  • Transcribed locus, strongly similar to NP_035794.1 ubiquitin B [Mus musculus]
    		• 192255
    		NM_138895   7293  
    7296  
    		   5
    72
  • Oryctolagus cuniculus elongation factor 1 A2 (EEF1A-2), mRNA
  • Elongation factor 1 A2
    		• 100008677
    		NM_001082031   6265  
    		   5
    73
  • Transcribed locus, strongly similar to NP_003078.1 synuclein, gamma (breast cancer-specific protein 1) [Homo sapiens]
    		•     6007  
    		   5
    74
  • Transcribed locus, strongly similar to NP_032436.1 integral membrane protein 2B [Mus musculus]
    		•     3719  
    		   5
    75
  • Transcribed locus
  • Transcribed locus, strongly similar to NP_006046.1 lanthionine synthetase C-like protein 1 [Homo sapiens]
    		•     1437  
    6946  
    		   5
    76
  • Oryctolagus cuniculus similar to human phosphoglycerate kinase mRNA, partial 3'UTR
    		•     1449  
    		   5
    77
  • Unidentified nbc06a03
    		•         5
    78
  • 97% protein similarity to: RPL7 protein [Homo sapiens]
    		•         5
    79
  • 82% protein similarity to: PREDICTED: similar to prosaposin isoform 3 [Canis familiaris]
    		•         5
    80
  • 46% protein similarity to: MSTP008 [Homo sapiens]
    		•         5
    81
  • 90% protein similarity to: ubiquinol-cytochrome c reductase core protein II [Bos taurus]
    		•         5
    82
  • 92% protein similarity to: C-4 methylsterol oxidase (Methylsterol monooxygenase)
    		•         5
    83
  • Unidentified nbc09b04
    		•         5
    84
  • PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC608454), mRNA
  • Transcribed locus, strongly similar to NP_058849.1 ribosomal protein S3a [Rattus norvegicus]
    		• 608454
    		XM_535263   1654  
    		   4
    85
  • Oryctolagus cuniculus lactate dehydrogenase-M (LDH-M), mRNA
  • Lactate dehydrogenase-M
    		• 100009107
    		NM_001082277   1108  
    		   4
    86
  • Oryctolagus cuniculus cathepsin B mRNA, partial cds
  • Cathepsin B
    		• 100101593
    		EF472888   6673  
    		   4
    87
  • Equus caballus capping protein (actin filament) muscle Z-line, alpha 2 (CAPZA2), mRNA
    		• 100071181
    		NM_001114142       4
    88
  • Bos taurus TSC22 domain family, member 3 (TSC22D3), mRNA
    		• 100125309
    		NM_001103342       4
    89
  • PREDICTED: Macaca mulatta clathrin heavy chain 1, transcript variant 3 (CLTC), mRNA
    		• 711563
    		XM_001108544       4
    90
  • Rattus norvegicus profilin 2 (Pfn2), mRNA
    		• 81531
    		NM_030873       4
    91
  • PREDICTED: Pan troglodytes alpha 1 type I collagen, transcript variant 10 (COL1A1), mRNA
    		• 455117
    		XM_511874       4
    92
  • PREDICTED: Bos taurus similar to alpha-tubulin (LOC784266), mRNA
    		• 784266
    		XM_001252624       4
    93
  • PREDICTED: Macaca mulatta platelet activating factor acetylhydrolase 45 kDa subunit brain isoform (LIS1), mRNA
    		• 574255
    		XM_001087675       4
    94
  • Sylvilagus floridanus amyloid beta precursor protein (APP) gene, partial cds
    		•   AY011345       4
    95
  • Bos taurus tubulin, beta 2C (TUBB2C), mRNA
    		• 539149
    		NM_001034663       4
    96
  • Bos taurus heterogeneous nuclear ribonucleoprotein A1 (HNRPA1), mRNA
    		• 505093
    		NM_001045911       4
    97
  • PREDICTED: Pan troglodytes similar to QKI, transcript variant 2 (LOC472181), mRNA
    		• 472181
    		XM_001154802       4
    98
  • Oryctolagus cuniculus Y box binding protein 1 (YBX1), mRNA
  • Y box binding protein 1
  • Transcribed locus, strongly similar to NP_113751.3 Y box protein 1 [Rattus norvegicus]
    		• 100009583
    		NM_001082785   6201  
    6951  
    		   4
    99
  • Bos taurus reticulon 3 (RTN3), mRNA
  • Transcribed locus
    		• 359721
    		NM_182657   13  
    		   4
    100
  • Oryctolagus cuniculus phosphatidylethanolamine-binding protein (PEBP), mRNA
  • Phosphatidylethanolamine-binding protein
    		• 100008884
    		NM_001082143   6205  
    		   4


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