NbLib0086: NEI rabbit cornea unnormalized (naf)

Last GRIST date: 10/15/2008

Related Publication: Development of a Microarray Chip for Gene Expression in Rabbit Ocular Research. Michael P. Popp, Li Liu, Adrian Timmers, Douglas W. Esson, Lineu Shiroma, Craig Meyers, Scott Berceli, Ming Tao, Graeme Wistow, Gregory S. Schultz, Mark B. Sherwood. Mol Vis. 2007. 13:164-173. View Publication

View this library: Full List | Indexed by Chromosome | Indexed by GO Term | Tab Delimited Understanding NEIBank Data
[**] This UniGene associated with another RefSeq or GenBank in this table. Click to display. View All Data | << Previous Page | Next Page >>
Group#Description Entrez Gene IdGenBankUniGene (Build Ocu #11) ChromosomeNum. Clones
1
  • Oryctolagus cuniculus decorin (LOC100009171), mRNA
  • Decorin
    		• 100009171
    		NM_001082330   1430  
    		   97
    2
  • Oryctolagus cuniculus endothelin-1 (ET-1), mRNA
  • Transcribed locus, strongly similar to NP_033120.1 ribosomal protein S4, X-linked [Mus musculus]
    		• 100009270
    		NM_001101696   1652 [**] 
    		   59
    3
  • Oryctolagus cuniculus elongation factor 1 alpha (RABEFLA2), mRNA
  • Elongation factor 1 alpha
    		• 100009189
    		NM_001082339   1580  
    		   45
    4
  • Oryctolagus cuniculus osteoglycin (LOC100008835), mRNA
  • Osteoglycin
    		• 100008835
    		NM_001082116   1158  
    		   43
    5
  • Oryctolagus cuniculus mRNA for alpha 2 type I collagen, partial cds
  • Alpha 2(I) procollagen
    		• 100008997
    		D49399   6518 [**] 
    		   40
    6
  • Transcribed locus, strongly similar to XP_423225.1 PREDICTED: similar to rat ribosomal protein L9 homologue [Gallus gallus]
    		•     1355  
    		   40
    7
  • Oryctolagus cuniculus keratocan mRNA, partial cds
  • Keratocan
    		• 100009022
    		DQ239829   6283 [**] 
    		   39
    8
  • Oryctolagus cuniculus lumican mRNA, partial cds
  • Lumican
    		• 100008665
    		AF020292   1642 [**] 
    		   39
    9
  • Oryctolagus sp. mRNA for calcyclin, complete cds
  • Transcribed locus, strongly similar to NP_055439.1 S100 calcium-binding protein A6 [Homo sapiens]
    		•   D10885   1714  
    		   38
    10
  • Transcribed locus, strongly similar to NP_037356.1 ribosomal protein S26 [Rattus norvegicus]
    		•     1613  
    		   38
    11
  • Oryctolagus cuniculus annexin I gene, complete cds
  • Transcribed locus, moderately similar to NP_037036.1 annexin A1 [Rattus norvegicus]
    		•   U24656   1705  
    		   36
    12
  • Transcribed locus, strongly similar to NP_001001593.1 ribosomal protein L23a [Danio rerio]
    		•     3465  
    		   34
    13
  • Oryctolagus cuniculus glutathione S-transferase mRNA, complete cds
  • Oryctolagus cuniculus glutathione S-transferase
    		•   M74528   6221  
    		   33
    14
  • Transcribed locus, strongly similar to NP_001021.1 ribosomal protein S27 [Homo sapiens]
    		•     7306  
    		   31
    15
  • PREDICTED: Pan troglodytes similar to KIAA0069 (LOC453960), mRNA
  • Transcribed locus, strongly similar to NP_997927.1 ribosomal protein S15a [Danio rerio]
  • Transcribed locus, strongly similar to NP_997925.1 hypothetical protein LOC336641 [Danio rerio]
    		• 453960
    		XM_510852   3462  
    6533 [**] 
    		   28
    16
  • PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC608454), mRNA
  • Transcribed locus, strongly similar to NP_058849.1 ribosomal protein S3a [Rattus norvegicus]
    		• 608454
    		XM_535263   1654 [**] 
    		   26
    17
  • Oryctolagus cuniculus epididymal protein 52 (EP52-C1), mRNA
  • Transcribed locus, strongly similar to NP_000986.2 ribosomal protein L34 [Homo sapiens]
    		• 100008711
    		NM_001082047   1558 [**] 
    		   23
    18
  • Oryctolagus cuniculus ribosomal protein S20 (RPS20) mRNA, partial cds
  • Ribosomal protein S20
    		• 100008653
    		AF011562   1464  
    		   23
    19
  • Transcribed locus, strongly similar to NP_000977.1 ribosomal protein L24 [Homo sapiens]
    		•     1634  
    		   23
    20
  • Transcribed locus, strongly similar to NP_033106.1 ribosomal protein L26 [Mus musculus]
    		•     3504  
    6528  
    		   21
    21
  • Transcribed locus, strongly similar to NP_000962.2 ribosomal protein L7 [Homo sapiens]
    		•     3478  
    		   20
    22
  • Transcribed locus, strongly similar to NP_001007600.1 ribosomal protein L23 [Rattus norvegicus]
    		•     1064  
    		   20
    23
  • PREDICTED: Pan troglodytes similar to 40S ribosomal protein S12 (LOC747115), mRNA
    		• 747115
    		XM_001155941       19
    24
  • Transcribed locus, strongly similar to NP_035430.1 ribosomal protein S7 [Mus musculus]
    		•     1457  
    		   19
    25
  • Ovis aries calmodulin 2 (CALM2), mRNA
  • Transcribed locus, strongly similar to NP_031615.1 calmodulin 2 [Mus musculus]
    		• 443230
    		NM_001009759   1435  
    		   18
    26
  • PREDICTED: Macaca mulatta hypothetical protein LOC699376 (LOC699376), mRNA
    		• 699376
    		XR_010738       18
    27
  • Transcribed locus, strongly similar to NP_000981.1 ribosomal protein L27a [Homo sapiens]
    		•     1284  
    		   18
    28
  • PREDICTED: Equus caballus ribosomal protein L35a (RPL35A), mRNA
    		• 100034007
    		XM_001501503       17
    29
  • Transcribed locus, strongly similar to NP_990284.1 ribosomal protein S27a [Gallus gallus]
    		•     1039  
    		   17
    30
  • 35% protein similarity to: salivary proline-rich protein [Homo sapiens]
    		•         16
    31
  • PREDICTED: Macaca mulatta similar to 40S ribosomal protein S6, transcript variant 2 (LOC712274), mRNA
    		• 712274
    		XM_001109213       15
    32
  • Transcribed locus, strongly similar to NP_000989.1 ribosomal protein L37a [Homo sapiens]
    		•     1410  
    		   15
    33
  • PREDICTED: Pan troglodytes similar to ribosomal protein L11 (LOC745599), mRNA
  • Transcribed locus, strongly similar to NP_001020910.1 ribosomal protein L11 [Rattus norvegicus]
    		• 745599
    		XM_001165780   1614 [**] 
    		   14
    34
  • Transcribed locus, moderately similar to NP_001017920.1 death associated protein-like 1 [Homo sapiens]
    		•     3499  
    		   14
    35
  • PREDICTED: Equus caballus similar to ribosomal protein S17 (LOC100068442), mRNA
  • Transcribed locus, strongly similar to NP_058848.1 ribosomal protein S17 [Rattus norvegicus]
    		•   XM_001498283   3413 [**] 
    		   13
    36
  • Bos taurus peroxiredoxin 1 (PRDX1), mRNA
    		• 281997
    		NM_174431       13
    37
  • 99% protein similarity to: mCG49427 [Mus musculus]
    		•         12
    38
  • PREDICTED: Macaca mulatta similar to myosin, light polypeptide 6, alkali, smooth muscle and non-muscle, transcript variant 3 (LOC711889), mRNA
  • Transcribed locus, strongly similar to NP_034990.1 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Mus musculus]
    		• 711889
    		XM_001114386   1056  
    		   11
    39
  • PREDICTED: Macaca mulatta similar to thymosin, beta 10, transcript variant 1 (LOC694305), mRNA
    		• 694305
    		XM_001082480       11
    40
  • Bos taurus SPARC-like 1 (mast9, hevin) (SPARCL1), mRNA
    		• 507537
    		NM_001034302       11
    41
  • Transcribed locus, strongly similar to NP_001007968.1 ribosomal protein L30 [Gallus gallus]
    		•     3575  
    		   11
    42
  • Transcribed locus, strongly similar to NP_009140.1 ribosomal protein L35 [Homo sapiens]
    		•     1646  
    		   11
    43
  • 100% protein similarity to: mCG7602 [Mus musculus] (Similar to EST: DN883883)
  • Transcribed locus, strongly similar to NP_037008.1 ribosomal protein S29 [Rattus norvegicus]
    		•   DN883883   6557  
    		   11
    44
  • Transcribed locus, strongly similar to NP_001015.1 ribosomal protein S21 [Homo sapiens]
    		•     3411 [**] 
    7344 [**] 
    		   10
    45
  • PREDICTED: Pan troglodytes hypothetical LOC457859 (LOC457859), mRNA
  • Transcribed locus
    		• 457859
    		XM_530241   3616  
    		   9
    46
  • Oryctolagus cuniculus matrix Gla protein (LOC100008989), mRNA
  • Matrix Gla protein
    		• 100008989
    		NM_001082200   6218  
    		   8
    47
  • Oryctolagus cuniculus beta A3-crystallin (LOC100008864), mRNA
  • Beta A3-crystallin
    		• 100008864
    		NM_001082130   3244  
    		   8
    48
  • Oryctolagus cuniculus cyclophilin 18 (LOC100008724), mRNA
  • Cyclophilin 18
    		• 100008724
    		NM_001082057   6197  
    		   8
    49
  • Transcribed locus
    		•     1704  
    		   8
    50
  • Transcribed locus, strongly similar to NP_001005528.1 ribosomal protein s25 [Rattus norvegicus]
    		•     3397  
    		   8
    51
  • Transcribed locus, strongly similar to NP_000987.2 ribosomal protein L35a [Homo sapiens]
    		•     1633  
    		   8
    52
  • 43% protein similarity to: proline-rich protein BstNI subfamily 1 isoform 1 precursor [Homo sapiens]
    		•         8
    53
  • Rattus norvegicus nascent-polypeptide-associated complex alpha polypeptide (predicted) (Naca_predicted), mRNA
  • Transcribed locus, strongly similar to NP_038636.2 nascent polypeptide-associated complex alpha subunit isoform b [Mus musculus]
    		• 288770
    		NM_001105939   3432 [**] 
    		   7
    54
  • PREDICTED: Pan troglodytes hypothetical protein LOC737451 (LOC737451), mRNA
  • Transcribed locus, strongly similar to NP_037007.1 ribosomal protein L39 [Rattus norvegicus]
    		• 737451
    		XM_001137802   1741  
    		   7
    55
  • PREDICTED: Rattus norvegicus similar to ribosomal protein L37 (predicted) (RGD1560186_predicted), mRNA
  • Transcribed locus, strongly similar to XP_424773.1 PREDICTED: similar to ribosomal protein L37 [Gallus gallus]
    		• 289384
    		XM_223076   1698  
    		   7
    56
  • PREDICTED: Macaca mulatta similar to Transcription factor BTF3 (RNA polymerase B transcription factor 3), transcript variant 1 (BTF3), mRNA
  • Transcribed locus, strongly similar to NP_001008310.1 basic transcription factor 3 [Rattus norvegicus]
  • Transcribed locus, strongly similar to NP_001008310.1 basic transcription factor 3 [Rattus norvegicus]
    		• 703339
    		XM_001100318   1156  
    7342  
    		   7
    57
  • Transcribed locus, strongly similar to NP_775369.1 ribosomal protein L36A [Danio rerio]
    		•     3399  
    		   7
    58
  • Transcribed locus, strongly similar to NP_001025790.1 ribosomal protein S14 [Gallus gallus]
    		•     1603  
    		   7
    59
  • Transcribed locus
    		•     1379  
    		   7
    60
  • Transcribed locus, strongly similar to XP_418020.1 PREDICTED: similar to Rpl10a-prov protein [Gallus gallus]
    		•     1287  
    		   7
    61
  • Transcribed locus, strongly similar to NP_001007604.1 ribosomal protein S20 [Rattus norvegicus]
    		•     1702  
    7341  
    		   7
    62
  • Rattus norvegicus thymosin, beta 4 (Tmsb4x), mRNA
    		• 81814
    		NM_031136       6
    63
  • Transcribed locus, weakly similar to NP_116012.2 ovary-specific acidic protein [Homo sapiens]
    		•     3402  
    		   6
    64
  • Transcribed locus, strongly similar to XP_001476570.1 PREDICTED: hypothetical protein [Mus musculus]
    		•     3739  
    		   6
    65
  • Transcribed locus, strongly similar to XP_853871.1 PREDICTED: similar to cytochrome c oxidase, subunit 7a 3 [Canis familiaris]
    		•     3662  
    		   6
    66
  • Transcribed locus, strongly similar to NP_113897.2 ribosomal protein S12 [Rattus norvegicus]
    		•     3562  
    		   6
    67
  • Transcribed locus, strongly similar to NP_997925.1 hypothetical protein LOC336641 [Danio rerio]
    		•     6533 [**] 
    7307 [**] 
    		   6
    68
  • Oryctolagus cuniculus aldehyde dehydrogenase (ALDDH), mRNA
  • Aldehyde dehydrogenase
    		• 100008636
    		NM_001082013   1307  
    		   5
    69
  • Oryctolagus cuniculus tumor protein, translationally-controlled 1 (TPT1), mRNA
  • Tumor protein, translationally-controlled 1
    		• 100008854
    		NM_001082129   3689  
    		   5
    70
  • PREDICTED: Equus caballus hypothetical protein LOC100062440 (LOC100062440), mRNA
    		• 100062440
    		XM_001494011       5
    71
  • Oryctolagus cuniculus 20-alpha-hydroxysteroid dehydrogenase (LOC100009071), mRNA
  • 20-alpha-hydroxysteroid dehydrogenase
    		• 100009071
    		NM_001082250   3559 [**] 
    		   5
    72
  • PREDICTED: Canis familiaris similar to Small EDRK-rich factor 2 (4F5rel), transcript variant 1 (LOC609041), mRNA
    		• 609041
    		XM_846939       5
    73
  • Oryctolagus cuniculus ribosomal protein L5 homolog mRNA, partial cds
  • Ribosomal protein L5
    		• 100008649
    		AF007880   1418 [**] 
    		   5
    74
  • Oryctolagus cuniculus cystatin C (LOC100009450), mRNA
  • Cystatin C
    		• 100009450
    		NM_001082706   6200  
    		   5
    75
  • Oryctolagus cuniculus prostaglandin D synthase (LOC100009453), mRNA
  • Prostaglandin D synthase
    		• 100009453
    		NM_001082708   1238  
    		   5
    76
  • Transcribed locus, strongly similar to NP_033121.1 ribosomal protein S5 [Mus musculus]
    		•     1241  
    		   5
    77
  • Transcribed locus, strongly similar to NP_001093115.1 ribosomal protein L22-like 1 [Homo sapiens]
    		•     3527  
    		   5
    78
  • Transcribed locus, moderately similar to XP_001128089.1 PREDICTED: similar to fatty acid binding protein homologue [Homo sapiens]
    		•     1436  
    		   5
    79
  • Transcribed locus, strongly similar to NP_658906.1 crystallin, gamma B [Mus musculus]
  • Transcribed locus, strongly similar to NP_031801.1 crystallin, gamma C isoform 1 [Mus musculus]
    		•     6553 [**] 
    6636 [**] 
    		   5
    80
  • Transcribed locus, strongly similar to NP_001020910.1 ribosomal protein L11 [Rattus norvegicus]
    		•     1614 [**] 
    		   5
    81
  • Transcribed locus, strongly similar to NP_058848.1 ribosomal protein S17 [Rattus norvegicus]
    		•     3413 [**] 
    		   5
    82
  • Transcribed locus, strongly similar to XP_001480433.1 PREDICTED: hypothetical protein isoform 2 [Mus musculus]
    		•     6538  
    		   5
    83
  • Transcribed locus, strongly similar to NP_058856.1 ribosomal protein S6 [Rattus norvegicus]
    		•     1550  
    		   5
    84
  • 100% protein similarity to: ribosomal protein S18 [Stenella coeruleoalba]
    		•         5
    85
  • 100% protein similarity to: ribosomal protein S8 [Homo sapiens]
    		•         5
    86
  • 61% protein similarity to: HAI-2 related small protein [Mus musculus]
    		•         5
    87
  • 95% protein similarity to: E3-16 [Homo sapiens]
    		•         5
    88
  • Oryctolagus cuniculus eukaryotic translation initiation factor 4 gamma, 2 (EIF4G2), mRNA
  • Eukaryotic translation initiation factor 4 gamma, 2
    		• 100009236
    		NM_001082379   6219  
    		   4
    89
  • Sus scrofa small nuclear ribonucleoprotein polypeptide E (SNRPE), mRNA
    		• 100037980
    		NM_001097465       4
    90
  • Rattus norvegicus procollagen, type 1, alpha 1 (Col1a1), mRNA
    		• 29393
    		NM_053304       4
    91
  • Sus scrofa capping protein (actin filament) muscle Z-line, alpha 2 (CAPZA2), mRNA
    		• 100037958
    		NM_001097455       4
    92
  • Oryctolagus cuniculus cathepsin L mRNA, partial cds
  • Cathepsin L
    		• 100008830
    		AF458078   1413  
    		   4
    93
  • PREDICTED: Pan troglodytes similar to putative polyubiquitin (UBQ10) (LOC459636), mRNA
  • Transcribed locus, strongly similar to NP_035794.1 ubiquitin B [Mus musculus]
  • Transcribed locus, strongly similar to NP_035794.1 ubiquitin B [Mus musculus]
    		• 459636
    		XR_024413   3571  
    7293  
    		   4
    94
  • PREDICTED: Bos taurus collagen, type XII, alpha 1, transcript variant 1 (COL12A1), mRNA
  • Transcribed locus
    		• 359712
    		XM_611630   3583 [**] 
    		   4
    95
  • PREDICTED: Ornithorhynchus anatinus similar to hCG23722 (LOC100078874), mRNA
  • Transcribed locus
    		• 100078874
    		XM_001509825   1582  
    		   4
    96
  • PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3, subunit 6 (predicted), transcript variant 10 (LOC475070), mRNA
  • Transcribed locus, strongly similar to NP_001011990.1 eukaryotic translation initiation factor 3, subunit 6 [Rattus norvegicus]
    		• 475070
    		XM_855080   3704  
    		   4
    97
  • Oryctolagus cuniculus apolipoprotein D (APOD), mRNA
  • Apolipoprotein D
    		• 100009080
    		NM_001082258   1146  
    		   4
    98
  • Oryctolagus cuniculus sterol carrier protein 2 (SCP2), mRNA
  • Sterol carrier protein 2
    		• 100008683
    		NM_001082035   2203  
    		   4
    99
  • Transcribed locus, strongly similar to NP_989488.2 eukaryotic translation elongation factor 1 alpha 1 [Gallus gallus]
  • Transcribed locus, strongly similar to NP_006004.1 ribosomal protein L10 [Homo sapiens]
    		•     1974  
    7309  
    		   4
    100
  • Transcribed locus, strongly similar to NP_060869.2 vanin 3 isoform 1 precursor [Homo sapiens]
    		•     1274  
    		   4


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