Mouse Trim2 - EyeBrowse/UCSC Genome Browser v194

UCSC Genes

Trim2 (uc008pqb.1) at chr3:84010392-84024783 - 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930001C03 product:tripartite motif protein 2, full insert sequence.
Trim2 (uc008pqa.1) at chr3:83993724-84024783 - Adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330102G01 product:tripartite motif protein 2, full insert sequence.
Trim2 (uc008ppz.1) at chr3:83966651-84108663 - tripartite motif protein 2
Trim2 (uc008ppy.1) at chr3:83966651-84074651 - tripartite motif protein 2
Trim2 (uc008ppx.1) at chr3:83966651-84063700 - tripartite motif protein 2
Trim2 (uc008ppw.1) at chr3:83964367-84024783 - tripartite motif protein 2
Trim29 (uc009pbi.1) at chr9:43119614-43144208 - tripartite motif protein 29
Trim21 (uc009irx.1) at chr7:109706436-109713983 - tripartite motif protein 21
Trim21 (uc009irw.1) at chr7:109706436-109713983 - tripartite motif protein 21
Trim28 (uc009ffb.1) at chr7:13609510-13616378 - tripartite motif protein 28
Trim24 (uc009bjl.1) at chr6:37820811-37916289 - tripartite motif protein 24
Trim24 (uc009bjk.1) at chr6:37820811-37916289 - tripartite motif protein 24
Trim24 (uc009bjj.1) at chr6:37820811-37906475 - Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis,dev_stage=adult, strain=C57BL/6J), clone:V01Y037G13.
Trim24 (uc009bji.1) at chr6:37820811-37896799 - Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis,dev_stage=adult, strain=C57BL/6J), clone:V01Y037G13.
Trim26 (uc008clh.1) at chr17:36974086-36996325 - tripartite motif protein 26 isoform a
Trim26 (uc008clg.1) at chr17:36974086-36991932 - NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630218K08 product:tripartite motif protein 26, full insert sequence.
Trim23 (uc007rsy.1) at chr13:104969178-104992128 - tripartite motif protein 23
Trim23 (uc007rsx.1) at chr13:104968919-104992128 - tripartite motif protein 23
Trim27 (uc007ppy.1) at chr13:21271828-21284726 - tripartite motif protein 27
Trim25 (uc007kwc.1) at chr11:88860717-88881607 - tripartite motif protein 25
Trim25 (uc007kwb.1) at chr11:88860717-88874985 - tripartite motif protein 25
Pml (uc009pwq.1) at chr9:58066349-58097593 - promyelocytic leukemia isoform 1
Chd4 (uc009dtk.1) at chr6:125046181-125080519 - chromodomain helicase DNA binding protein 4
Cebpb (uc008oaf.1) at chr2:167514415-167515918 - CCAAT/enhancer binding protein beta
Eif3e (uc007vpk.1) at chr15:43081586-43114282 - eukaryotic translation initiation factor 3,
Setdb1 (uc008qjn.1) at chr3:95127447-95161095 - SET domain, bifurcated 1
Sertad1 (uc009fwh.1) at chr7:28271972-28275333 - SERTA domain containing 1
Cbx1 (uc007lcl.1) at chr11:96650450-96669954 - chromobox homolog 1
Cbx5 (uc007xxn.1) at chr15:103021977-103070247 - chromobox homolog 5
Cbx5 (uc007xxl.1) at chr15:103021977-103045783 - chromobox homolog 5
Cbx5 (uc007xxm.1) at chr15:103021977-103045783 - chromobox homolog 5
Epc1 (uc008dzi.1) at chr18:6435949-6490854 - enhancer of polycomb homolog 1 isoform 2

RefSeq Genes

Trim2 at chr3:83965796-84024799 - (NM_030706) tripartite motif protein 2
Trim21 at chr7:109706436-109713983 - (NM_009277) tripartite motif protein 21
Trim21 at chr7:109706436-109713983 - (NM_001082552) tripartite motif protein 21
Trim23 at chr13:104969178-104992128 - (NM_030731) tripartite motif-containing 23
Trim24 at chr6:37820811-37916289 - (NM_145076) tripartite motif-containing 24
Trim25 at chr11:88860717-88881607 - (NM_009546) tripartite motif protein 25
Trim26 at chr17:36974086-36996325 - (NM_001025599) tripartite motif protein 26 isoform a
Trim27 at chr13:21271828-21284726 - (NM_009054) tripartite motif protein 27
Trim28 at chr7:13609501-13616381 - (NM_011588) tripartite motif protein 28
Trim29 at chr9:43118846-43144208 - (NM_023655) tripartite motif protein 29

Non-Mouse RefSeq Genes

Trim2 at chr3:83964369-84024783 - (NM_001108552) tripartite motif protein 2
TRIM2 at chr3:83964362-84014276 - (NM_001130067) tripartite motif-containing 2 isoform 2
TRIM2 at chr3:83964367-84014280 - (NM_001083735) tripartite motif-containing 2
trim2 at chr3:83969019-84014272 - (NM_001005680) tripartite motif-containing 2
TRIM2 at chr3:83964362-84074592 - (NM_015271) tripartite motif-containing 2 isoform 1
Trim21 at chr7:109707636-109712624 - (NM_001082572) tripartite motif-containing 21
TRIM21 at chr7:109707625-109712589 - (NM_182655) tripartite motif protein 21
TRIM21 at chr7:109707340-109713994 - (NM_003141) tripartite motif protein 21
TRIM22 at chr7:111374084-111409976 - (NM_006074) tripartite motif-containing 22
TRIM22 at chr7:111374084-111409964 - (NM_001113359) tripartite motif-containing 22
TRIM22 at chr7:111374084-111409964 - (NM_001113396) tripartite motif-containing 22
TRIM23 at chr13:104968935-104991496 - (NM_001080303) tripartite motif-containing 23
TRIM23 at chr13:104968881-104993411 - (NM_033227) ADP-ribosylation factor domain protein 1 isoform
TRIM23 at chr13:104968881-104993411 - (NM_033228) ADP-ribosylation factor domain protein 1 isoform
trim23 at chr13:104971152-104991490 - (NM_001093355) tripartite motif-containing 23
TRIM23 at chr13:104968881-104993411 - (NM_001656) ADP-ribosylation factor domain protein 1 isoform
Trim24 at chr6:37895690-37962521 - (NM_001044266) tripartite motif-containing 24
TRIM24 at chr6:37820954-37916290 - (NM_003852) transcriptional intermediary factor 1 alpha
TRIM24 at chr6:37820954-37916290 - (NM_015905) transcriptional intermediary factor 1 alpha
Trim25 at chr11:88860743-88878433 - (NM_001009536) tripartite motif-containing 25
TRIM25 at chr11:88860803-88878036 - (NM_001100336) tripartite motif-containing 25
TRIM25 at chr11:88860791-88880482 - (NM_005082) tripartite motif-containing 25
Trim26 at chr17:36974129-36996319 - (NM_001011665) tripartite motif-containing 26
TRIM26 at chr17:36987625-36995851 - (NM_003449) tripartite motif-containing 26
TRIM26 at chr17:36987636-36995027 - (NM_001114967) tripartite motif-containing 26
TRIM26 at chr17:36987636-36995027 - (NM_001044376) tripartite motif-containing 26
TRIM26 at chr17:36987636-36995027 - (NM_001123209) tripartite motif-containing 26
Trim27 at chr13:21272083-21284749 - (NM_001106115) tripartite motif-containing 27 isoform 2
TRIM27 at chr13:21272341-21284717 - (NM_001075799) ret finger protein
TRIM27 at chr13:21272339-21285915 - (NM_006510) ret finger protein
Trim27 at chr13:21272070-21284726 - (NM_001134974) tripartite motif-containing 27 isoform 1
TRIM28 at chr7:13609885-13616375 - (NM_005762) tripartite motif-containing 28 protein
Trim28 at chr7:13609784-13616388 - (NM_053916) tripartite motif-containing 28
Trim29 at chr9:43118842-43144199 - (NM_001106815) tripartite motif protein 29
TRIM29 at chr9:43118865-43143260 - (NM_012101) tripartite motif protein TRIM29

Mouse Aligned mRNA Search Results

BC056390 - Mus musculus tripartite motif-containing 23, mRNA (cDNA clone MGC:73426 IMAGE:6854944), complete cds.
BC059017 - Mus musculus tripartite motif-containing 23, mRNA (cDNA clone MGC:69677 IMAGE:6848690), complete cds.
BC026517 - Mus musculus tripartite motif-containing 26, mRNA (cDNA clone IMAGE:4912310), partial cds.
BC037110 - Mus musculus tripartite motif-containing 26, mRNA (cDNA clone MGC:46748 IMAGE:5369645), complete cds.
BC129862 - Mus musculus tripartite motif-containing 26, mRNA (cDNA clone IMAGE:40110005), partial cds.
BC025482 - Mus musculus tripartite motif-containing 24, mRNA (cDNA clone IMAGE:5150949), partial cds.
BC006908 - Mus musculus tripartite motif-containing 25, mRNA (cDNA clone MGC:6886 IMAGE:2651664), complete cds.
BC034276 - Mus musculus tripartite motif-containing 25, mRNA (cDNA clone MGC:30340 IMAGE:4022161), complete cds.
BC006699 - Mus musculus tripartite motif-containing 29, mRNA (cDNA clone IMAGE:3498575), partial cds.
BC027353 - Mus musculus tripartite motif-containing 29, mRNA (cDNA clone MGC:28195 IMAGE:3988926), complete cds.
AF230400 - Mus musculus tripartite motif protein TRIM23 mRNA, partial cds.
AF230396 - Mus musculus tripartite motif protein TRIM26 beta mRNA, complete cds.
AF230395 - Mus musculus tripartite motif protein TRIM26 alpha mRNA, complete cds.
AF230392 - Mus musculus tripartite motif protein TRIM28 beta mRNA, complete cds.
AF230391 - Mus musculus tripartite motif protein TRIM28 alpha mRNA, complete cds.
AF230390 - Mus musculus tripartite motif protein TRIM29 mRNA, partial cds.
AF220017 - Mus musculus tripartite motif protein TRIM2 (Trim2) mRNA, complete cds.
BC058391 - Mus musculus tripartite motif-containing 28, mRNA (cDNA clone MGC:67017 IMAGE:6817165), complete cds.
BC089337 - Mus musculus tripartite motif-containing 28, mRNA (cDNA clone MGC:102100 IMAGE:6811294), complete cds.
BC056959 - Mus musculus tripartite motif-containing 24, mRNA (cDNA clone MGC:66731 IMAGE:5698079), complete cds.
BC010580 - Mus musculus tripartite motif-containing 21, mRNA (cDNA clone MGC:6059 IMAGE:3584654), complete cds.
CT010336 - Mus musculus full open reading frame cDNA clone RZPDo836F1052D for gene Trim21, Tripartite motif protein 21; complete cds, incl. stopcodon.
BC003219 - Mus musculus tripartite motif-containing 27, mRNA (cDNA clone MGC:5991 IMAGE:3482042), complete cds.
BC069924 - Mus musculus tripartite motif-containing 27, mRNA (cDNA clone IMAGE:4936715).
BC058961 - Mus musculus tripartite motif-containing 2, mRNA (cDNA clone MGC:66857 IMAGE:6826143), complete cds.
AY974562 - Mus musculus tripartite motif-containing 23-like (Trim23) mRNA, partial sequence.
AK013219 - Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810431N19 product:ATAXIA-TELANGIECTASIA GROUP D-ASSOCIATED PROTEIN (TRIPARTITE MOTIF PROTEIN TRIM29 ALPHA) homolog [Homo sapiens], full insert sequence.

Jackson Laboratory / Mouse Genome Informatics Allele (jaxAllele)

NM_145076_Trim24<tm1.1Los> at chr6:37820811-37916289
NM_145076_Trim24<tm1Los> at chr6:37820811-37916289
NM_011588_Trim28<tm1.1Ipc> at chr7:13609501-13616381
NM_011588_Trim28<tm1.2Ipc> at chr7:13609501-13616381
NM_011588_Trim28<tm1Ipc> at chr7:13609501-13616381

Jackson Laboratory / Mouse Genome Informatics Phenotype (jaxPhenotype)

NM_145076_Trim24 at chr6:37820811-37916289
NM_145076_Trim24 at chr6:37820811-37916289
NM_145076_Trim24 at chr6:37820811-37916289
NM_011588_Trim28 at chr7:13609501-13616381
NM_011588_Trim28 at chr7:13609501-13616381
NM_011588_Trim28 at chr7:13609501-13616381

Jackson Laboratory / Mouse Genome Informatics Representative Transcript (jaxRepTranscript)

NM_009546_Trim25 at chr11:88860717-88881607
NM_009054_Trim27 at chr13:21271828-21284726
NM_030731_Trim23 at chr13:104969178-104992128
NM_001025599_Trim26 at chr17:36974086-36996325
NM_030706_Trim2 at chr3:83965796-84024799
NM_145076_Trim24 at chr6:37820811-37916289
NM_011588_Trim28 at chr7:13609501-13616381
NM_009277_Trim21 at chr7:109706436-109713983
NM_023655_Trim29 at chr9:43118846-43144208