UCSC Genes
Shh (uc008wua.1) at chr5:28783380-28793628 - sonic hedgehog
Ptch1 (uc007qxv.1) at chr13:63612840-63666828 - patched
Hhat (uc007edp.1) at chr1:194336710-194597215 - hedgehog acyltransferase
Ptch2 (uc008uhx.1) at chr4:116768961-116787436 - patched homolog 2
Hhip (uc009miy.1) at chr8:82495773-82581892 - Hedgehog-interacting protein
Gli1 (uc007hjf.1) at chr10:126766938-126778635 - GLI-Kruppel family member GLI1
Hand2 (uc009lss.2) at chr8:59799780-59803314 - heart and neural crest derivatives expressed
Olig1 (uc007zxf.1) at chr16:91270014-91272184 - oligodendrocyte transcription factor 1
Rere (uc008vxr.1) at chr4:149656025-149996075 - arginine glutamic acid dipeptide (RE) repeats
Sostdc1 (uc007njx.1) at chr12:37040813-37045032 - uterine sensitization-associated protein 1
Olig2 (uc007zxe.1) at chr16:91225795-91228922 - oligodendrocyte transcription factor 2
RefSeq Genes
Shh at chr5:28783380-28793641 - (NM_009170) sonic hedgehog
Non-Mouse RefSeq Genes
Shh at chr5:28784313-28793616 - (NM_017221) sonic hedgehog
SHH at chr5:28784363-28793420 - (NM_000193) sonic hedgehog preproprotein
SHH at chr5:28784413-28793609 - (NM_204821) sonic hedgehog homolog
shha at chr5:28783387-28793294 - (NM_131063) sonic hedgehog
shhb at chr1:74993284-74997677 - (NM_131199) sonic hedgehog b
Alias of STS Marker
SHH at chr5:28685132-28885310 - (SHH)
Mouse Aligned mRNA Search Results
BC063087 - Mus musculus sonic hedgehog, mRNA (cDNA clone MGC:69975 IMAGE:6516263), complete cds.
X76290 - M.musculus (C57BL/6J) Shh mRNA.
EU664592 - Mus musculus strain C57BL/6J sonic hedgehog (Shh) mRNA, partial cds.
L36074 - Mus musculus (strain B10.SHH1) T-cell receptor antigen (H2-M3), exons 2-4.
AK052447 - Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430024L03 product:SONIC HEDGEHOG PROTEIN PRECURSOR (SHH) (HHG-1) homolog [Mus musculus], full insert sequence.
Non-Mouse Aligned mRNA Search Results
BC166395 - Xenopus (Silurana) tropicalis, shh protein
EU867217 - Maylandia zebra, Shh
BC162395 - Danio rerio, shha protein
BC111925 - synthetic construct, SHH protein
AY460200 - Cyprinus carpio, SHH precursor
AB007129 - Oryzias latipes, shh
BC078321 - Danio rerio, sonic hedgehog b
AF113403 - Eleutherodactylus coqui, sonic hedgehog protein
AF003532 - Pleurodeles waltl, sonic hedgehog-related protein
AB185174 - Meriones unguiculatus, sonic hedgehog
AY540621 - Meriones unguiculatus, sonic hedgehog
AB301497 - Polypterus bichir, sonic hedgehog protein
EF100653 - Chiloscyllium punctatum, Sonic hedgehog
EF100659 - Polyodon spathula, Sonic hedgehog
EF100667 - Leucoraja erinacea, Sonic hedgehog
AY972523 - Ambystoma mexicanum, sonic hedgehog
AB256041 - Suncus murinus, sonic hedgehog
EF527277 - Alligator mississippiensis, sonic hedgehog
EF524566 - Trachemys scripta, sonic hedgehog
EU555185 - Python sebae, sonic hedgehog
AB029748 - Paralichthys olivaceus, sonic hedgehog
AB247650 - Scyliorhinus torazame, sonic hedgehog
AB247651 - Okamejei kenojei, sonic hedgehog
U30711 - Danio rerio, sonic hedgehog
Z35669 - Danio rerio, sonic hedgehog
AF022881 - Coturnix coturnix, sonic hedgehog
AF022882 - Coturnix coturnix, sonic hedgehog
AM397270 - Calyptommatus sinebrachiatus, sonic hedgehog
AY661431 - Astyanax mexicanus, sonic hedgehog precursor
AY690624 - Takifugu rubripes, sonic hedgehog
AB449250 - Neoceratodus forsteri, sonic hedgehog protein
DQ152989 - Ovis aries, sonic hedgehog-like
M62756 - Petroselinum crispum, S-adenosylhomocysteine hydrolase
M81885 - Petroselinum crispum, S-adenosylhomocysteine hydrolase
AF185635 - Lupinus luteus, S-adenosyl-L-homocysteinase
L38518 - Homo sapiens, sonic hedgehog protein
AY327848 - Trachemys scripta, sonic hedgehog
EU236145 - Causus rhombeatus, sonic hedgehog
Jackson Laboratory / Mouse Genome Informatics Allele (jaxAllele)
NM_013630_Pkd1<tm1Shh> at chr17:24686895-24733459
NM_009170_Shh<tm1(EGFP/cre)Cjt> at chr5:28783380-28793641
NM_009170_Shh<tm1Amc> at chr5:28783380-28793641
NM_009170_Shh<tm1Chg> at chr5:28783380-28793641
NM_009170_Shh<tm1Ptch> at chr5:28783380-28793641
NM_009170_Shh<tm2(cre/ESR1)Cjt> at chr5:28783380-28793641
NM_009170_Shh<tm2Amc> at chr5:28783380-28793641
NM_009170_Shh<tm2Chg> at chr5:28783380-28793641
NM_009170_Shh<tm3(cre)Chg> at chr5:28783380-28793641
NM_009170_Shh<tm3Amc> at chr5:28783380-28793641
NM_009170_Shh<tm4Amc> at chr5:28783380-28793641
NM_009170_Shh<tm5Amc> at chr5:28783380-28793641
NM_009170_Shh<tm6Amc> at chr5:28783380-28793641
NM_009170_Shh<Hx> at chr5:28783380-28793641
NM_009170_Shh<Dsh> at chr5:28783380-28793641
NM_009170_Shh<Hxl3> at chr5:28783380-28793641
NM_009170_Shh<M101116> at chr5:28783380-28793641
NM_009170_Shh<M101117> at chr5:28783380-28793641
NM_009170_Shh<M101192> at chr5:28783380-28793641
Jackson Laboratory / Mouse Genome Informatics Phenotype (jaxPhenotype)
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
NM_009170_Shh at chr5:28783380-28793641
Jackson Laboratory / Mouse Genome Informatics Representative Transcript (jaxRepTranscript)
NM_009170_Shh at chr5:28783380-28793641