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- S-adenosylhomocysteine hydrolase: AHCY
- sal-like 1 (Drosophila): SALL1
- sal-like 4 (Drosophila): SALL4
- SAR1 gene homolog B (S. cerevisiae): SAR1B
- selenoprotein N, 1: SEPN1
- senataxin: SETX
- serine/threonine kinase 11: STK11
- serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1: SERPINA1
- serpin peptidase inhibitor, clade I (neuroserpin), member 1: SERPINI1
- serum amyloid A1: SAA1
- SET binding factor 2: SBF2
- sex determining region Y: SRY
- SH3 domain and tetratricopeptide repeats 2: SH3TC2
- SH3-domain binding protein 2: SH3BP2
- short stature homeobox: SHOX
- Shwachman-Bodian-Diamond syndrome: SBDS
- signal transducer and activator of transcription 3 (acute-phase response factor): STAT3
- SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae): SIL1
- SIX homeobox 1: SIX1
- SIX homeobox 5: SIX5
- SLIT and NTRK-like family, member 1: SLITRK1
- SMAD family member 4: SMAD4
- snail homolog 2 (Drosophila): SNAI2
- sodium channel, voltage-gated, type I, alpha subunit: SCN1A
- sodium channel, voltage-gated, type IV, alpha subunit: SCN4A
- sodium channel, voltage-gated, type IX, alpha subunit: SCN9A
- sodium channel, voltage-gated, type V, alpha subunit: SCN5A
- solute carrier family 1 (glial high affinity glutamate transporter), member 3: SLC1A3
- solute carrier family 2 (facilitated glucose transporter), member 1: SLC2A1
- solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1: SLC3A1
- solute carrier family 5 (sodium/glucose cotransporter), member 1: SLC5A1
- solute carrier family 5 (sodium iodide symporter), member 5: SLC5A5
- solute carrier family 7 (cationic amino acid transporter, y+ system), member 7: SLC7A7
- solute carrier family 7 (cationic amino acid transporter, y+ system), member 9: SLC7A9
- solute carrier family 12 (potassium/chloride transporters), member 6: SLC12A6
- solute carrier family 16, member 2 (monocarboxylic acid transporter 8): SLC16A2
- solute carrier family 17 (anion/sugar transporter), member 5: SLC17A5
- solute carrier family 22 (organic cation/carnitine transporter), member 5: SLC22A5
- solute carrier family 25 (carnitine/acylcarnitine translocase), member 20: SLC25A20
- solute carrier family 25, member 13 (citrin): SLC25A13
- solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15: SLC25A15
- solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19: SLC25A19
- solute carrier family 26, member 4: SLC26A4
- solute carrier family 26 (sulfate transporter), member 2: SLC26A2
- solute carrier family 40 (iron-regulated transporter), member 1: SLC40A1
- solute carrier family 45, member 2: SLC45A2
- son of sevenless homolog 1 (Drosophila): SOS1
- SP110 nuclear body protein: SP110
- spastic ataxia of Charlevoix-Saguenay (sacsin): SACS
- spastic paraplegia 3A (autosomal dominant): SPG3A
- spastic paraplegia 7 (pure and complicated autosomal recessive): SPG7
- spastic paraplegia 20 (Troyer syndrome): SPG20
- spastin: SPAST
- sphingomyelin phosphodiesterase 1, acid lysosomal: SMPD1
- SRY (sex determining region Y)-box 10: SOX10
- stereocilin: STRC
- steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2): SRD5A2
- structural maintenance of chromosomes 1A: SMC1A
- structural maintenance of chromosomes 3: SMC3
- sucrase-isomaltase (alpha-glucosidase): SI
- superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult)): SOD1
- survival of motor neuron 1, telomeric: SMN1
- survival of motor neuron 2, centromeric: SMN2
- SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1: SMARCAL1
- synuclein, alpha interacting protein (synphilin): SNCAIP
- synuclein, alpha (non A4 component of amyloid precursor): SNCA
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