Procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1, Homo sapiens

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Finding cDNAs

UGID:139725 UniGene Hs.75093 Homo sapiens (human) PLOD1

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Procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1 (PLOD1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_865452.1	PREDICTED: similar to Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 precursor (Lysyl hydroxylase 1) (LH1) isoform 2	C. lupus familiaris	96.0	743
NP_000926.2	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 isoform b precursor	H. sapiens	68.0	729

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	Expression Profile:	View expression levels using UniGene's EST ProfileViewer [Show more entries with profiles like this]
	GEO profiles:	Gene expression profiles in the NCBI Gene Expression Omnibus database
	cDNA Sources:	brain; skin; lung; kidney; uncharacterized tissue; connective tissue; placenta; vascular; uterus; testis; mammary gland; mixed; prostate; ovary; intestine; mouth; amniotic fluid; liver; eye; thymus; embryonic tissue; spleen; lymph node; salivary gland; pancreas; muscle; cervix; bladder; blood; trachea; epididymis; lymph; larynx; ascites; heart; bone; thyroid; ear; stomach; esophagus; pharynx; umbilical cord; adrenal gland; bone marrow; nerve; ganglia; pituitary gland; adipose tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	1
	Map position:	1p36.22

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_000302.2	Homo sapiens procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1 (PLOD1), mRNA	P
CR611067.1	full-length cDNA clone CS0DC011YM17 of Neuroblastoma Cot 25-normalized of Homo sapiens (human)	P
CR610822.1	full-length cDNA clone CS0DK006YC22 of HeLa cells Cot 25-normalized of Homo sapiens (human)
BC016657.2	Homo sapiens procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1, mRNA (cDNA clone MGC:8999 IMAGE:3917351), complete cds	PA
AK312243.1	Homo sapiens cDNA, FLJ92537, highly similar to Homo sapiens procollagen-lysine, 2-oxoglutarate 5-dioxygenase (lysine hydroxylase, Ehlers-Danlos syndrome type VI) (PLOD), mRNA
AK294688.1	Homo sapiens cDNA FLJ53377 complete cds, highly similar to Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 precursor (EC 1.14.11.4)
AK299150.1	Homo sapiens cDNA FLJ59393 complete cds, highly similar to Procollagen-lysine,2-oxoglutarate5-dioxygenase 1 precursor (EC 1.14.11.4)
AK295254.1	Homo sapiens cDNA FLJ52901 complete cds, highly similar to Procollagen-lysine,2-oxoglutarate5-dioxygenase 1 precursor (EC 1.14.11.4)
M98252.1	Homo sapiens lysyl hydroxylase (partial clone 2.2 Kb LH) RNA, complete mature peptide	P

EST sequences (10 of 1267) [Show all sequences]

AA960950.1	Clone IMAGE:1569709	lung	3' read
AA962215.1	Clone IMAGE:1553522	kidney	3' read	A
AA962477.1	Clone IMAGE:1573573	kidney	3' read	A
AA977304.1	Clone IMAGE:1589988	kidney	3' read	A
AA978217.1	Clone IMAGE:1273916	bone
AA991972.1	Clone IMAGE:1613549	uncharacterized tissue	3' read
AA995557.1	Clone IMAGE:1604142	lung	3' read
AA995739.1	Clone IMAGE:1604471	lung	3' read	A
AA904657.1	Clone IMAGE:1503954	mixed	3' read	A
AI021897.1	Clone IMAGE:1654633	mixed	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria