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Finding cDNAs
UGID:711144     UniGene Hs.495985     Homo sapiens (human)   TCIRG1 Order cDNA clone, Links
T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 (TCIRG1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_864075.1 PREDICTED: similar to T-cell, immune regulator 1 isoform a isoform 5 C. lupus familiaris 90.6 837
NP_570856.2 ATPase, H+ transporting, lysosomal V0 subunit a4 H. sapiens 60.8 830
NP_733271.1 Vha100-1 CG1709-PA, isoform A D. melanogaster 54.0 822
NP_001023022.1 UNCoordinated family member (unc-32) C. elegans 49.3 870

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented (8.5 pct) in cDNA library dbEST:7940, ET0106.
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: lung; uncharacterized tissue; mixed; intestine; bone marrow; pancreas; placenta; blood; brain; cervix; prostate; kidney; ganglia; liver; amniotic fluid; esophagus; skin; stomach; bone; tonsil; larynx; ascites; connective tissue; thymus; lymph; spleen; nerve; ovary; lymph node; muscle; uterus; embryonic tissue; mammary gland; eye; testis; bladder
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q13.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AF025374.1 Homo sapiens T cell immune response cDNA7 (TIRC7) mRNA, complete cds PA
NM_006019.2 Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 (TCIRG1), transcript variant 1, mRNA PA
NM_006053.2 Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 (TCIRG1), transcript variant 2, mRNA PA
AY548972.1 Homo sapiens T-cell immune regulator 1 transcript variant 9 (TCIRG1) mRNA, partial sequence; alternatively spliced
AY548971.1 Homo sapiens T-cell immune regulator 1 transcript variant 8 (TCIRG1) mRNA, partial cds; alternatively spliced
AY548970.1 Homo sapiens T-cell immune regulator 1 transcript variant 7 (TCIRG1) mRNA, partial cds; alternatively spliced P
AY548969.1 Homo sapiens T-cell immune regulator 1 transcript variant 6 (TCIRG1) mRNA, partial cds; alternatively spliced P
AY548968.1 Homo sapiens T-cell immune regulator 1 transcript variant 5 (TCIRG1) mRNA, partial cds; alternatively spliced P
AY548967.1 Homo sapiens T-cell immune regulator 1 transcript variant 4 (TCIRG1) mRNA, partial cds; alternatively spliced P
CR602058.1 full-length cDNA clone CS0DI059YF06 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR599870.1 full-length cDNA clone CS0DI006YO09 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR594613.1 full-length cDNA clone CS0DD004YI18 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) P
AY708391.1 Homo sapiens T-cell immune regulator 1 transcript variant 12 (TCIRG1) mRNA, partial sequence; alternatively spliced P
AY708390.1 Homo sapiens T-cell immune regulator 1 transcript variant 11 (TCIRG1) mRNA, partial sequence; alternatively spliced P
AY708389.1 Homo sapiens T-cell immune regulator 1 transcript variant 10 (TCIRG1) mRNA, partial sequence; alternatively spliced P
AY708388.1 Homo sapiens T-cell immune regulator 1 transcript variant 4 (TCIRG1) mRNA, partial cds; alternatively spliced P
U45285.1 Human specific 116-kDa vacuolar proton pump subunit (OC-116KDa) mRNA, complete cds PA
BC018133.1 Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, mRNA (cDNA clone MGC:9307 IMAGE:3905446), complete cds PA
AF497545.1 Homo sapiens T-cell immune regulator 1 transcript variant 3 (TCIRG1) mRNA, partial cds, alternatively spliced
BC032465.1 Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, mRNA (cDNA clone MGC:40548 IMAGE:5210733), complete cds PA

EST sequences (10 of 268) [Show all sequences]

AI003144.1 Clone IMAGE:1699927 kidney 3' read A
AI088498.1 Clone IMAGE:1696558 uterus 3' read PA
BX094700.1 Clone IMAGp998F081861_;_IMAGE:756871 ovary P
AI251454.1 Clone IMAGE:1977845 brain 3' read PA
AI289616.1 Clone IMAGE:1992461 uterus 3' read PA
AI308772.1 Clone IMAGE:1913576 intestine 3' read PA
AI359884.1 Clone IMAGE:2015083 brain 3' read PA
AI419842.1 Clone IMAGE:2112404 mixed 3' read A
CB216496.1 Clone IMAGE:5938352 uterus 5' read P
AI457772.1 Clone IMAGE:2150474 lung 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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