Ataxin 1, Homo sapiens - UniGene Hs.434961

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UGID:229998 UniGene Hs.434961 Homo sapiens (human) ATXN1

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Ataxin 1 (ATXN1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001121636.1	ataxin 1	H. sapiens	100.0	814
NP_033150.2	ataxin 1	M. musculus	89.5	790
NP_001038291.1	hypothetical protein LOC557340	D. rerio	52.0	780

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	Expression Profile:	View expression levels using UniGene's EST ProfileViewer [Show more entries with profiles like this]
	GEO profiles:	Gene expression profiles in the NCBI Gene Expression Omnibus database
	cDNA Sources:	brain; uterus; mixed; uncharacterized tissue; muscle; kidney; lung; mammary gland; liver; prostate; placenta; heart; pituitary gland; testis; embryonic tissue; pancreas; umbilical cord; skin; ovary; esophagus; blood; epididymis; salivary gland; nerve; eye; connective tissue; lymph node; stomach

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	6
Map position:	6p23
UniSTS entry:	Chr 6	STS-X79204
UniSTS entry:	Chr 6	WI-19222
UniSTS entry:	Chr 6	RH71007
UniSTS entry:	Chr 6	GDB:216054
UniSTS entry:	Chr 6	GDB:681830
UniSTS entry:	Chr 6	PMC109045P1
UniSTS entry:	Chr 6	WI-9349
UniSTS entry:	Chr 6	GDB:216047
UniSTS entry:	Chr 6	(n/a)
UniSTS entry:		RH36590

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_000332.3	Homo sapiens ataxin 1 (ATXN1), transcript variant 1, mRNA	PA
BC117125.1	Homo sapiens ataxin 1, mRNA (cDNA clone MGC:150734 IMAGE:40125676), complete cds	P
BC113081.1	Homo sapiens cDNA clone IMAGE:40071544
BC113082.1	Homo sapiens cDNA clone IMAGE:40071549	P
NM_001128164.1	Homo sapiens ataxin 1 (ATXN1), transcript variant 2, mRNA	PA
X79204.1	H.sapiens SCA1 mRNA for ataxin	PA

EST sequences (10 of 152) [Show all sequences]

AA978040.1	Clone IMAGE:1590265	kidney	3' read	A
AA987352.1	Clone IMAGE:1603333	lung	3' read	A
AA988272.1	Clone IMAGE:1605499	kidney	3' read	A
AA909468.1	Clone IMAGE:1523461	mixed	3' read	P
R21017.1	Clone IMAGE:36723	brain	5' read
AI131400.1	Clone IMAGE:1709493	heart	3' read
AI190546.1	Clone IMAGE:1733263	testis	3' read
AI202647.1	Clone IMAGE:1943648	prostate	3' read	A
CB142605.1	Clone L16HLK3-25-G05	liver	5' read
AI333951.1	Clone IMAGE:1933742	mixed	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria