Alstrom syndrome 1 (ALMS1)

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UGID:159609 UniGene Hs.184720 Homo sapiens (human) ALMS1

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Alstrom syndrome 1 (ALMS1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_530465.2	PREDICTED: hypothetical protein isoform 2	P. troglodytes	90.5	148
NP_660258.1	Alstrom syndrome 1	M. musculus	61.7	3250

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; brain; uncharacterized tissue; mixed; ovary; stomach; vascular; heart; mammary gland; thymus; eye; embryonic tissue; uterus; pituitary gland; mouth; bladder; lung; kidney; pancreas; connective tissue; muscle; liver; thyroid; larynx; intestine; trachea; ascites; ganglia; bone; skin; adipose tissue; placenta; lymph node

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	2
Map position:	2p13
UniSTS entry:	Chr 2	RH12381
UniSTS entry:	Chr 2	D2S2696
UniSTS entry:	Chr 2	RH45615

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC050330.1	Homo sapiens Alstrom syndrome 1, mRNA (cDNA clone IMAGE:4827788), partial cds	A
BX648632.1	Homo sapiens mRNA; cDNA DKFZp686D1828 (from clone DKFZp686D1828)	PA
BX647706.1	Homo sapiens mRNA; cDNA DKFZp686A118 (from clone DKFZp686A118)	A
EF151141.1	Homo sapiens Alstrom syndrome 1 splice variant (ALMS1) mRNA, partial cds, alternatively spliced	P
AJ417593.2	Homo sapiens mRNA for ALMS1 protein
NM_015120.4	Homo sapiens Alstrom syndrome 1 (ALMS1), mRNA	P
AL833495.1	Homo sapiens mRNA; cDNA DKFZp686L0929 (from clone DKFZp686L0929)	PA
BC035025.2	Homo sapiens Alstrom syndrome 1, mRNA (cDNA clone IMAGE:4827788), partial cds	PA
AB002326.3	Homo sapiens mRNA for KIAA0328 protein, partial cds	P

EST sequences (10 of 214) [Show all sequences]

AA961070.1	Clone IMAGE:1578817	mixed	3' read	P
R14339.1	Clone IMAGE:28541	brain	5' read
R14519.1	Clone IMAGE:29305	brain	5' read	P
R21286.1	Clone IMAGE:35677	brain	5' read	P
CB046774.1	Clone IMAGE:3253039	kidney	3' read
CB046775.1	Clone IMAGE:3253039	kidney	5' read	P
BX088771.1	Clone IMAGp998D103214_;_IMAGE:1276377	testis		P
AI221436.1	Clone IMAGE:1840994	mixed	3' read
AI223186.1	Clone IMAGE:1840549	mixed	3' read	A
CB144662.1	Clone L11SNU354s1-28-D01	liver	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria