Human APOB - EyeBrowse/UCSC Genome Browser v194

UCSC Genes

APOB48R (uc010byg.1) at chr16:28413494-28417783 - Apolipoprotein B-100 receptor (Apolipoprotein B48 receptor) (Apolipoprotein B-48 receptor) (apoB-48R).
APOB (uc002red.1) at chr2:21077806-21120450 - apolipoprotein B precursor
APOB48R (uc002dqb.1) at chr16:28413494-28417783 - apolipoprotein B48 receptor
SYNCRIP (uc003pla.1) at chr6:86380658-86409746 - synaptotagmin binding, cytoplasmic RNA
SCARB1 (uc001ugo.2) at chr12:123828127-123914472 - scavenger receptor class B, member 1 isoform 1
AMFR (uc002eiy.1) at chr16:54952865-55016945 - autocrine motility factor receptor
CUGBP2 (uc001iki.2) at chr10:11087265-11418678 - CUG triplet repeat, RNA binding protein 2
APOBEC-2 (uc010jxf.1) at chr6:41128991-41140233 - Homo sapiens APOBEC-2 (APOBEC-2) mRNA, complete cds.
APOBEC3H (uc010gxw.1) at chr22:37823236-37829946 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3F (uc010gxv.1) at chr22:37747064-37778304 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3D (uc010gxu.1) at chr22:37747064-37759202 - Homo sapiens cDNA FLJ37251 fis, clone BRAMY2007043, highly similar to Homo sapiens phorbolin I protein (PBI) mRNA.
APOBEC4 (uc009wyf.1) at chr1:181883436-181884539 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC2 (uc003opl.1) at chr6:41128991-41140233 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3H (uc003axa.2) at chr22:37827869-37830016 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H, mRNA (cDNA clone MGC:78644 IMAGE:5441646), complete cds.
APOBEC3G (uc003awy.1) at chr22:37805613-37813694 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3G (uc003awx.1) at chr22:37803082-37813694 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3F (uc003aww.1) at chr22:37766619-37781921 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3F (uc003awv.1) at chr22:37766619-37770374 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3D (uc003awt.2) at chr22:37747064-37759202 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3D (uc003aws.2) at chr22:37747064-37751622 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3C (uc003awr.1) at chr22:37740211-37744771 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3B (uc003awq.1) at chr22:37708351-37718729 - Homo sapiens cDNA: FLJ21201 fis, clone COL00275, highly similar to HSU61084 Homo sapiens phorbolin-1-related protein mRNA.
APOBEC3B (uc003awp.1) at chr22:37708351-37718729 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3B (uc003awo.1) at chr22:37708351-37718729 - apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3A (uc003awn.1) at chr22:37683569-37689134 - phorbolin 1
APOBEC1 (uc001qtc.1) at chr12:7693263-7709769 - apolipoprotein B mRNA editing enzyme
APOBEC1 (uc001qtb.1) at chr12:7693263-7709769 - apolipoprotein B mRNA editing enzyme
APOBEC4 (uc001gqn.1) at chr1:181882034-181889071 - apolipoprotein B mRNA editing enzyme, catalytic
A1CF (uc009xov.1) at chr10:52236331-52315441 - apobec-1 complementation factor isoform 1
A1CF (uc001jjj.1) at chr10:52236331-52315441 - apobec-1 complementation factor isoform 2
A1CF (uc001jji.1) at chr10:52236331-52315441 - apobec-1 complementation factor isoform 1
A1CF (uc001jjh.1) at chr10:52236331-52315441 - apobec-1 complementation factor isoform 3
RBM46 (uc003iop.1) at chr4:155922107-155969414 - Homo sapiens cDNA FLJ43889 fis, clone TESTI4009374, moderately similar to APOBEC1 complementation factor.
CNBP (uc003elq.2) at chr3:130369348-130385500 - zinc finger protein 9 isoform 3
KHSRP (uc002mer.2) at chr19:6364119-6375822 - KH-type splicing regulatory protein (FUSE
EIF4G2 (uc001mjc.1) at chr11:10775169-10787158 - eukaryotic translation initiation factor 4
DNAJB11 (uc003fqi.1) at chr3:187770646-187786283 - DnaJ (Hsp40) homolog, subfamily B, member 11

RefSeq Genes

APOB at chr2:21077806-21120450 - (NM_000384) apolipoprotein B precursor
APOB48R at chr16:28413494-28417783 - (NM_018690) apolipoprotein B48 receptor
APOBEC1 at chr12:7693263-7709769 - (NM_001644) apolipoprotein B mRNA editing enzyme
APOBEC2 at chr6:41128991-41140233 - (NM_006789) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3A at chr22:37683473-37689134 - (NM_145699) phorbolin 1
APOBEC3B at chr22:37708351-37718729 - (NM_004900) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3C at chr22:37740211-37744771 - (NM_014508) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3D at chr22:37747064-37759202 - (NM_152426) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3F at chr22:37766619-37781921 - (NM_145298) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3F at chr22:37766619-37770374 - (NM_001006666) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3G at chr22:37802971-37813693 - (NM_021822) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3H at chr22:37823236-37829946 - (NM_181773) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC4 at chr1:181882034-181889071 - (NM_203454) apolipoprotein B mRNA editing enzyme, catalytic
A1CF at chr10:52236331-52315441 - (NM_138933) apobec-1 complementation factor isoform 3
A1CF at chr10:52236331-52315441 - (NM_138932) apobec-1 complementation factor isoform 2
A1CF at chr10:52236331-52315441 - (NM_014576) apobec-1 complementation factor isoform 1

Non-Human RefSeq Genes

Apob at chr2:21078105-21118851 - (NM_009693) apolipoprotein B precursor
Apob at chr2:21077780-21118853 - (NM_019287) apolipoprotein B precursor
APOB at chr2:21078557-21118851 - (NM_001044633) apolipoprotein B (including Ag(x) antigen)
Apob48r at chr16:28413489-28418646 - (NM_001109154) apolipoprotein B48 receptor
APOBEC1 at chr12:7693466-7696700 - (NM_001032982) apolipoprotein B mRNA editing enzyme
Apobec1 at chr12:7694885-7709851 - (NM_012907) apolipoprotein B mRNA editing enzyme, catalytic
Apobec1 at chr12:7693326-7709884 - (NM_031159) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC1 at chr12:7693398-7696700 - (NM_001082341) apolipoprotein B mRNA editing enzyme, catalytic
Apobec2 at chr6:41128936-41139903 - (NM_001106883) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC2 at chr6:41129041-41140223 - (NM_001034355) apolipoprotein B mRNA editing enzyme, catalytic
Apobec2 at chr6:41128936-41137590 - (NM_009694) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC2 at chr6:41128997-41140608 - (NM_001131936) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3B at chr22:37741568-37827414 - (NM_001077845) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3C at chr22:37740314-37744338 - (NM_001114359) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3C at chr22:37778043-37778259 - (NM_001123036) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3C at chr22:37757667-37757884 - (NM_001123036) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3C at chr22:37743735-37743994 - (NM_001123036) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3F at chr22:37778022-37829911 - (NM_001097446) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3F at chr22:37741568-37827408 - (NM_001093784) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3F at chr22:37768881-37778646 - (NM_001042373) apolipoprotein B mRNA editing enzyme, catalytic
APOBEC3H at chr22:37826230-37829732 - (NM_001042372) apolipoprotein B mRNA editing enzyme, catalytic
Apobec4 at chr1:181883562-181888858 - (NM_001017492) apolipoprotein B mRNA editing enzyme, catalytic
Apobec4 at chr1:181883562-181888872 - (NM_001081197) apolipoprotein B mRNA editing enzyme, catalytic
A1cf at chr10:52236495-52289755 - (NM_133400) APOBEC1 complementation factor
A1cf at chr10:52235537-52289755 - (NM_001081074) APOBEC1 complementation factor
A1CF at chr10:52233164-52315393 - (NM_001133965) APOBEC1 complementation factor

Human Aligned mRNA Search Results

BC130519 - Homo sapiens APOBEC1 complementation factor, mRNA (cDNA clone MGC:163391 IMAGE:40146550), complete cds.
BC061914 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G, mRNA (cDNA clone IMAGE:3905631), complete cds.
FJ376615 - Homo sapiens clone HapII RDD-SV182 APOBEC3H (APOBEC3H) mRNA, complete cds, alternatively spliced.
FJ376612 - Homo sapiens clone HapI GKE-SV182 APOBEC3H (APOBEC3H) mRNA, complete cds, alternatively spliced.
FJ376613 - Homo sapiens clone HapI GKE-SV200 APOBEC3H (APOBEC3H) mRNA, complete cds, alternatively spliced.
FJ376617 - Homo sapiens clone HapII RDD-SV154 APOBEC3H (APOBEC3H) mRNA, complete cds, alternatively spliced.
FJ376611 - Homo sapiens clone HapI GKE-SV183 APOBEC3H (APOBEC3H) mRNA, complete cds, alternatively spliced.
FJ376614 - Homo sapiens clone HapII RDD-SV183 APOBEC3H (APOBEC3H) mRNA, complete cds, alternatively spliced.
FJ376616 - Homo sapiens clone HapII RDD-SV200 APOBEC3H (APOBEC3H) mRNA, complete cds, alternatively spliced.
BC119788 - Homo sapiens apolipoprotein B48 receptor, mRNA (cDNA clone MGC:134646 IMAGE:40008685), complete cds.
AJ272078 - Homo sapiens mRNA for APOBEC-1 stimulating protein (ASP gene), isolated from liver.
AJ272079 - Homo sapiens mRNA for APOBEC-1 stimulating protein (ASP gene), isolated from small intestine.
BC096158 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003120), partial cds.
BC101972 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003128), partial cds.
BC101973 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003125), partial cds.
BC053859 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B, mRNA (cDNA clone MGC:61606 IMAGE:6174285), complete cds.
BC051278 - Homo sapiens apolipoprotein B (including Ag(x) antigen), mRNA (cDNA clone IMAGE:6270815), complete cds.
AF271790 - Homo sapiens APOBEC-1 complementation factor related protein mRNA, complete cds.
AF271789 - Homo sapiens APOBEC-1 complementation factor mRNA, complete cds.
AF209192 - Homo sapiens Apobec-1 complementation factor mRNA, complete cds.
AF161698 - Homo sapiens APOBEC-2 (APOBEC-2) mRNA, complete cds.
EU527884 - Homo sapiens apolipoprotein B mRNA editing enzyme catalytic polypeptide-like 3DE (APOBEC3DE) mRNA, complete cds.
BC069023 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H, mRNA (cDNA clone MGC:78644 IMAGE:5441646), complete cds.
BC148619 - Synthetic construct Homo sapiens clone IMAGE:100015580, MGC:183104 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D (APOBEC3D) mRNA, encodes complete protein.
BC153185 - Synthetic construct Homo sapiens clone IMAGE:100016554, MGC:184326 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D (APOBEC3D) mRNA, encodes complete protein.
CU012954 - Homo sapiens APOBEC3D, mRNA (cDNA clone IMAGE:100000117), complete cds, with stop codon, in Gateway system.
CU013242 - Homo sapiens APOBEC3D, mRNA (cDNA clone IMAGE:100000021), complete cds, without stop codon, in Gateway system.
CU012950 - Homo sapiens APOBEC3A, mRNA (cDNA clone IMAGE:100000114), complete cds, with stop codon, in Gateway system.
CU013238 - Homo sapiens APOBEC3A, mRNA (cDNA clone IMAGE:100000018), complete cds, without stop codon, in Gateway system.
BC126416 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A, mRNA (cDNA clone MGC:161694 IMAGE:8992132), complete cds.
U72890 - Human apolipoprotein B mRNA editing enzyme complex-1 (apobec-1) mRNA, partial cds.
U72891 - Human apolipoprotein B mRNA editing enzyme complex-1 (apobec-1) mRNA, complete cds.
L26234 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 (APOBEC1) mRNA, complete cds.
M17367 - Human apolipoprotein B-48 gene, partial cds.
M12413 - Human apolipoprotein B-100 mRNA, 3' end.
M10374 - Human apolipoprotein B100 mRNA, partial cds.
M12480 - Human apolipoprotein B-100 mRNA, partial cds.
M14081 - Human apolipoprotein B mRNA, 5' end.
M12681 - Human apolipoprotein B-100 mRNA, 5' end.
M18036 - Human apolipoprotein B48 mRNA, 3' end.
M17779 - Human intestinal apolipoprotein B-48 mRNA, 3' end.
M14162 - Human apolipoprotein B-100 mRNA, complete cds.
M31030 - Homo sapiens apolipoprotein B 100 (APOB) mRNA, partial cds.
M15421 - Human apolipoprotein B-100 mRNA, complete cds.
K03175 - Human apolipoprotein B mRNA, partial cds.
BC038808 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F, mRNA (cDNA clone MGC:46498 IMAGE:5227163), complete cds.
CU012953 - Homo sapiens APOBEC3F, mRNA (cDNA clone IMAGE:100000116), complete cds, with stop codon, in Gateway system.
CU013241 - Homo sapiens APOBEC3F, mRNA (cDNA clone IMAGE:100000020), complete cds, without stop codon, in Gateway system.
BC021711 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative), mRNA (cDNA clone MGC:26594 IMAGE:4826920), complete cds.
BC011739 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C, mRNA (cDNA clone MGC:19485 IMAGE:4331363), complete cds.
CU012952 - Homo sapiens APOBEC3C, mRNA (cDNA clone IMAGE:100000115), complete cds, with stop codon, in Gateway system.
CU013240 - Homo sapiens APOBEC3C, mRNA (cDNA clone IMAGE:100000019), complete cds, without stop codon, in Gateway system.
AY743217 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B (APOBEC3B) mRNA, complete cds.
CU012951 - Homo sapiens APOBEC3B, mRNA (cDNA clone IMAGE:100000573), complete cds, with stop codon, in Gateway system.
CU013031 - Homo sapiens APOBEC3B, mRNA (cDNA clone IMAGE:100000289), complete cds, with stop codon, in Gateway system.
CU013239 - Homo sapiens APOBEC3B, mRNA (cDNA clone IMAGE:100000477), complete cds, without stop codon, in Gateway system.
CU013319 - Homo sapiens APOBEC3B, mRNA (cDNA clone IMAGE:100000193), complete cds, without stop codon, in Gateway system.
BC024268 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G, mRNA (cDNA clone MGC:39116 IMAGE:4877863), complete cds.
CU013022 - Homo sapiens APOBEC3G, mRNA (cDNA clone IMAGE:100000184), complete cds, with stop codon, in Gateway system.
CU013310 - Homo sapiens APOBEC3G, mRNA (cDNA clone IMAGE:100000088), complete cds, without stop codon, in Gateway system.
AF141332 - Homo sapiens apolipoprotein B48 receptor (APOB48R) mRNA, complete cds.
AF141334 - Homo sapiens placenta apolipoprotein B48 receptor type 2 (APOB48R) mRNA, complete cds.
BC119786 - Homo sapiens apolipoprotein B48 receptor, mRNA (cDNA clone MGC:134647 IMAGE:40008686), complete cds.
BC047767 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2, mRNA (cDNA clone MGC:54215 IMAGE:6202939), complete cds.
BC069688 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2, mRNA (cDNA clone MGC:97306 IMAGE:7262555), complete cds.
BC069764 - Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2, mRNA (cDNA clone MGC:97318 IMAGE:7262567), complete cds.
BC144196 - Homo sapiens APOBEC1 complementation factor, mRNA (cDNA clone MGC:177733 IMAGE:9052716), complete cds.
AK303801 - Homo sapiens cDNA FLJ61033 complete cds, highly similar to APOBEC1 complementation factor.
AK302720 - Homo sapiens cDNA FLJ61489 complete cds, moderately similar to APOBEC1 complementation factor.
AK125877 - Homo sapiens cDNA FLJ43889 fis, clone TESTI4009374, moderately similar to APOBEC1 complementation factor.
AK315650 - Homo sapiens cDNA, FLJ96740, Homo sapiens apolipoprotein B mRNA editing enzyme, catalyticpolypeptide-like 3G (APOBEC3G), mRNA.
AK313288 - Homo sapiens cDNA, FLJ93800, Homo sapiens apolipoprotein B mRNA editing enzyme, catalyticpolypeptide-like 2 (APOBEC2), mRNA.
AK313272 - Homo sapiens cDNA, FLJ93783, Homo sapiens apolipoprotein B mRNA editing enzyme, catalyticpolypeptide-like 3C (APOBEC3C), mRNA.
BC054873 - Homo sapiens APOBEC1 complementation factor, mRNA (cDNA clone IMAGE:6568205), complete cds.
BC022263 - Homo sapiens APOBEC1 complementation factor, mRNA (cDNA clone IMAGE:4714438), with apparent retained intron.
AK291982 - Homo sapiens cDNA FLJ77578 complete cds, highly similar to Homo sapiens apobec-1 complementation factor (ACF), transcript variant 1, mRNA.
AK290844 - Homo sapiens cDNA FLJ77094 partial cds, highly similar to Homo sapiens apolipoprotein B (including Ag(x) antigen) (APOB), mRNA.
U76713 - Human apobec-1 binding protein 1 mRNA, complete cds.
X03326 - Human mRNA fragment for apolipoprotein B (lambda apoB 2).
X03325 - Human mRNA fragment for apolipoprotein B (lambda apoB 1).
X03324 - Human mRNA fragment for apolipoprotein B (lambda apoB 17).
X04714 - Human mRNA for apolipoprotein B-100 (apoB-100).
AJ399514 - Homo sapiens partial mRNA for apolipoprotein B (apoB gene), editing region.
AK025123 - Homo sapiens cDNA: FLJ21470 fis, clone COL04907, highly similar to AF141332 Homo sapiens apolipoprotein B48 receptor (APOB48R) mRNA.