Fred K. Friedman, Laboratory of Metabolism, Center for Cancer Research, NCI, NIH
Allen Markowitz, Division of Bioengineering and Physical Science, NIH
OVERVIEW
Laser flash photolysis is a useful technique for
disruption of photolabile chemical bonds. The kinetics of the subsequent
re-formation of such bonds can then be monitored with a suitable detection
system. This technique has proven useful for following the reassociaton
kinetics of hemeproteins with carbon monoxide. We describe the construction
of this apparatus along with microcomputer based signal acquisition and
processing.
The essential components of the system are:
LASER
The ideal laser light source delivers a pulse with
sufficient energy to break the photolabile bond, and whose duration is
small relative to the reassociation time. A model DL2100A dye laser,
model PDL-11 electronics console, and model 2K dye circulator (Lumenx,
Durham NH)) are used. This system yields an output energy of 1 joule with
a pulse width of 0.4 µs. A high voltage of 18 kV was routinely used
to generate a laser pulse. Rhodamine 110 in ethanol was used as the laser
dye, since it lases at 570 nm, a light wavelength which photodissociates
the cytochrome P450-CO complex.
DETECTION SYSTEM
The sample holder, a 1 cm square quartz spectrofluorometer
cell, was placed in a water- cooled aluminum block such that the detection
light was perpendicular to the laser pulse. In association with an external
circulator water bath, it provides temperature regulation in the range
of 0 to 50 degrees.
The detection light source is a 45 watt tungsten
halogen lamp (General Electric model Q6.6A/T2½/CL). Its power supply
(Lambda model LES-F-01-OV) supplys variable voltage to the lamp. Light
from the lamp is focused with a lens and passed through a 450 nm bandpass
filter (Kodak); this wavelength exhibits the greatest difference in transmittance
upon formation of the cytochrome P450-CO complex.
The Wratten number 50 filter (Kodak) between the
sample and the PMT reduces the intensity of the scattered laser light which
impinges on the PMT; this prolongs PMT lifetime and reduces PMT hysteresis.
A PMT ( Hamamatsu model R106) is used in conjunction with a high voltage
power supply (Hamamatsu model C956-04). The latter is connected to an external
+15 volt power supply with a variable resistor that controls the high voltage
level.
A major noise source is the PMT. The S/N ratio of
the PMT is given by:
S/N = Is/sqrt((2q(Is+Id)Gf))
where
Is = signal current
Id = dark current
G= current amplification factor of PMT
f= bandwidth of the system in Hz
q= electronic charge = 1.6x10^19 coul
Examination of this equation reveals that the S/N is increased by lowering G and increasing Is. The former is accomplished by decreasing the PMT high voltage. Although Is is lowered by this change, Is can then be readjusted by raising the light intensity. It should also be noted that decreasing the PMT high voltage also reduces the maximum linear response of Is to light intensity, and care must thus be taken to ensure that Is remains in the linear response region.
ELECTRONIC SIGNAL PROCESSING AND CONTROL
In order to view the time dependence of the transmittance
change, the PMT output current was converted to voltage, amplified and
filtered. The PMT current is first input to a preamplifier (Hamamatsu model
C1053-3) which is a current to voltage converter with a conversion factor
of 0.3 V/µa.
According to the Nyquist sampling theorem, the sampling
rate must be greater than twice the signal frequency in order to eliminate
frequency aliasing. If this condition is not met, high frequency components
of the signal appear as low frequency components which cannot be subsequently
corrected by software filtering. To prevent aliasing, the signal is applied
to a 8-pole low-pass Bessel variable filter (Frequency Devices model 902)
with a range of 0 to 29.9 kHz. This device also introduces a variable offset
and gain (0-20 db) in order to subsequently utilize the full scale of the
A/D converter, and allows for improved resolution of the signal. A/D conversion
and data storage are performed using an IBM 386 microcomputer with an internal
A/D converter board (Data Translation model DT2821-G8DI). This 12 bit board
has a 150 kHz throughput and variable gain.
Data collection is initiated by triggering the A/D
converter with a start switch. After an adjustable delay time during which
baseline signal data was acquired, photolysis is initiated by electronically
triggering the laser pulse.
DATA PROCESSING
Data acquisition is performed using Labtech Notebook
software (Laboratory Technologies, Wilmington MA), which produces data
in ASCII format. The S/N ratio is then improved by the following signal
processing techniques.
Data from repetitive experiments are first averaged
to improve S/N. The data are then subjected to digital filtering using
a Fortran program, which employs a FFT subroutine, to remove high frequency
noise. However, an FFT requires periodic input data. Since data for the
reassociation reaction is a single and nonrepetitive decaying signal, the
algorithm thus imposes periodicity via introducing a transient to connect
the initial and final data points. To eliminate the resulting frequency
artifacts, detrending with curve inversion was used prior to performing
the FFT: a linear function was added to the data to yield a transformed
data set with zero end values, followed by curve inversion around the origin.
The user then provides a cutoff frequency for removing frequency components
above the range of interest, and these components were rejected using a
first-order low- pass filter. An inverse FFT is then performed, followed
by reversing the above detrending and curve inversion operations.
In a typical application with rat liver microsomes,
the high voltage and lamp voltage were experimentally determined to minimize
the S/N ratio due to the PMT, and were 800 V and 4.0 V, respectively. Optimum
settings correspond to the maximum light intensity consistent with a linear
PMT response, which avoided photo-degradation of the sample. To ensure
signal fidelity in accordance with the Nyquist criterion, we use sampling
rates of 10-50 kHz with the Bessel filter set at half this frequency. The
amplifier gain and offset voltage were set to 20 db and 2.1 V, respectively,
in order to utilize full scale resolution of the A/D converter with an
input range of ±10 volts. Approximately 130 baseline readings are
taken before the laser pulse, in order to determine the equilibrium value.
Software enhancements of the data can be performed
with three techniques, which differ in their relative merits. 1) Repetitive
signal averaging is the simplest approach and does not distort the data.
However, this approach can be limited owing to photo-degradation of the
sample after multiple laser flashes. In addition, the marginal efficacy
decreases as the repetitive number increases because S/N varies with the
square root of this number. 2) A moving point average distorts data and
has the additional disadvantage that this operation excludes a series of
initial and final points; this tends to conceal any initial rapid reaction
components. 3) The FFT approach for low pass filtering is potentially the
most powerful. However, one must carefully examine the frequency domain
data to ensure selection of an appropriate cutoff frequency which is higher
than that of the reaction components. Selection of a lower frequency would
distort the data owing to exclusion of relevant frequency components above
the cutoff frequency.
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