NbLib0099: dbEST rat cornea unnormalized (rncorn01)

Last GRIST date: 10/08/2008

This library includes the following UniGene libs: Lib.12850, Lib.12858.

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Group#	Description	Entrez Gene Id	GenBank	UniGene (Build Rn #176)	Chromosome (UniGene)	Num. Clones
1	Rattus norvegicus CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) (Cd74), mRNA CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	25599	NM_013069	33804	18q12.1	46
2	Rattus norvegicus decorin (Dcn), mRNA Decorin	29139	NM_024129	106103	7q13	30
3	PREDICTED: Rattus norvegicus similar to Myristoylated alanine-rich C-kinase substrate (MARCKS) (Protein kinase C substrate 80 kDa protein) (LOC681252), mRNA Similar to Myristoylated alanine-rich C-kinase substrate (MARCKS) (Protein kinase C substrate 80 kDa protein)	681252	XM_001060954	9560	20	20
4	Rattus norvegicus guanylate nucleotide binding protein 2 (Gbp2), mRNA Guanylate nucleotide binding protein 2	171164	NM_133624	25736	2q44	20
5	Rattus norvegicus S100 calcium binding protein A9 (calgranulin B) (S100a9), mRNA S100 calcium binding protein A9 (calgranulin B)	94195	NM_053587	6703	2q34	19
6	Rattus norvegicus partial mRNA for MHC class II RT1-B alpha chain haplotype u RT1 class II, locus Ba	309621	AJ554214	25717	20p12	18
7	PREDICTED: Rattus norvegicus desmoplakin, transcript variant 1 (Dsp), mRNA Desmoplakin	306871	XM_001058415	54711	17p12	17
8	PREDICTED: Rattus norvegicus Ly6/Plaur domain containing 2 (predicted) (Lypd2_predicted), mRNA Ly6/Plaur domain containing 2	300017	XM_001073630	19695	7q34	15
9	Rattus norvegicus hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit (Hadhb), nuclear gene encoding mitochondrial protein, mRNA Keratin 15	171155	NM_133618	153568	10q32.1	15
10	Rattus norvegicus RT1 class II, locus Da (RT1-Da), mRNA RT1 class II, locus Da	294269	NM_001008847	103146	20p12	15
11	Rattus norvegicus epithelial membrane protein 1 (Emp1), mRNA Epithelial membrane protein 1	25314	NM_012843	19723	4q43	13
12	Rattus norvegicus aldehyde dehydrogenase family 3, member A1 (Aldh3a1), mRNA Aldehyde dehydrogenase 3 family, member A1	25375	NM_031972	105627	10q22	12
13	Rattus norvegicus eukaryotic translation elongation factor 1 alpha 1 (Eef1a1), mRNA Eukaryotic translation elongation factor 1 alpha 1 Transcribed locus, strongly similar to NP_989488.2 eukaryotic translation elongation factor 1 alpha 1 [Gallus gallus] Eukaryotic translation elongation factor 1 alpha 1	171361	NM_175838	144660 195004 965	8q31 X 8q31	12
14	Rattus norvegicus secretory leukocyte peptidase inhibitor (Slpi), mRNA Secretory leukocyte peptidase inhibitor	84386	NM_053372	18560	3q42	12
15	Rattus norvegicus upstream of NRAS (Unr), mRNA Cold shock domain containing E1, RNA binding	117180	NM_054006	3562	2q34	11
16	Rattus norvegicus syndecan 4 (Sdc4), mRNA Syndecan 4 Transcribed locus	24771	NM_012649	2029 217582	3q42 3	11
17	Rattus norvegicus lumican (Lum), mRNA Lumican	81682	NM_031050	3087	7q13	10
18	Rattus norvegicus MHC class II antigen RT1.B beta chain mRNA, partial cds Similar to RT1 class II histocompatibility antigen, B-1 beta chain precursor (RT1.B-beta(1))		U65217	202964 [**]	20p12	10
19	Rattus norvegicus chemokine (C-C motif) ligand 5 (Ccl5), mRNA Chemokine (C-C motif) ligand 5	81780	NM_031116	8019	10q26	10
20	Rattus norvegicus actin, beta (Actb), mRNA Actin, beta	81822	NM_031144	94978 [**]	12p11	10
21	Rattus norvegicus protein tyrosine phosphatase, receptor type, C (Ptprc), transcript variant 3, mRNA Protein tyrosine phosphatase, receptor type, C	24699	NM_001109887	90166	13q13	10
22	Rattus norvegicus high mobility group box 1 (Hmgb1), mRNA Transcribed locus, strongly similar to NP_990233.1 high-mobility group box 1 [Gallus gallus] Similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) Similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30)	25459	NM_012963	15185 170058 4121	12p11 Xq14 12p11	9
23	Rattus norvegicus meningioma expressed antigen 5 (hyaluronidase) (Mgea5), mRNA Meningioma expressed antigen 5 (hyaluronidase)	154968	NM_131904	162539 [**]	1q54	8
24	Rattus norvegicus complement component 3 (C3), mRNA AHNAK nucleoprotein (desmoyokin)	24232	NM_016994	112831	1q43	8
25	Rattus norvegicus apolipoprotein D (Apod), mRNA Apolipoprotein D	25239	NM_012777	11339	11q11	8
26	Rattus norvegicus CDW92 antigen (Cdw92), transcript variant 1, mRNA CDW92 antigen	85254	NM_001033852	97686	5q24	7
27	Rattus norvegicus selenoprotein P, plasma, 1 (Sepp1), transcript variant 2, mRNA Selenoprotein P, plasma, 1	29360	NM_001083911	1451	2q16	7
28	Rattus norvegicus tumor protein, translationally-controlled 1 (Tpt1), mRNA Tumor protein, translationally-controlled 1	116646	NM_053867	36610	15q11	7
29	Rattus norvegicus chemokine (C-C motif) ligand 19 (predicted) (Ccl19_predicted), mRNA Chemokine (C-C motif) ligand 19	362506	NM_001108661	12445	5q22	7
30	Rattus norvegicus zinc finger protein 36, C3H type-like 1 (Zfp36l1), mRNA Zinc finger protein 36, C3H type-like 1	29344	NM_017172	6142	6q24	7
31	Rattus norvegicus mortality factor 4 like 2 (Morf4l2), mRNA Mortality factor 4 like 2	317413	NM_001007714	6961	Xq35	7
32	Rattus norvegicus ddx5 gene (Ddx5), mRNA DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	287765	NM_001007613	162208	10q32.1	7
33	Rattus norvegicus protein tyrosine phosphatase 4a2 (Ptp4a2), mRNA Protein tyrosine phosphatase 4a2	85237	NM_053475	167750		7
34	Rattus norvegicus calcium-activated chloride channel (Rbclca2), mRNA Chloride channel calcium activated 4-like	499721	NM_001077356	26573	2q44	7
35	Transcribed locus			24172	15	7
36	Rattus norvegicus beta-2 microglobulin (B2m), mRNA Beta-2 microglobulin	24223	NM_012512	1868 [**]	3q35	6
37	Rattus norvegicus YME1-like 1 (S. cerevisiae) (Yme1l1), nuclear gene encoding mitochondrial protein, mRNA YME1-like 1 (S. cerevisiae)	114217	NM_053682	8153	17q12.3	6
38	Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330137N20 product:similar to HEPATIC LEUKEMIA FACTOR [Homo sapiens], full insert sequence Transcribed locus	217082	AK079068	21134 [**]	10	6
39	PREDICTED: Rattus norvegicus mucin 4 (Muc4), mRNA Mucin 4, cell surface associated	303887	XM_001072593	24930	11q22	6
40	Rattus norvegicus procollagen, type III, alpha 1 (Col3a1), mRNA Collagen, type III, alpha 1	84032	NM_032085	3247	9q22	6
41	Rattus norvegicus thymosin, beta 4 (Tmsb4x), mRNA Thymosin, beta 4, X chromosome	81814	NM_031136	2605		6
42	Rattus norvegicus Class II MHC RT1.D(a) beta chain precursor (RT1.D(a)) mRNA, complete cds RT1 class II, locus Db1		AF084932	33311 [**]	20p12	6
43	Rattus norvegicus ribosomal protein L27a (predicted) (Rpl27a_predicted), mRNA Ribosomal protein L27a	293418	NM_001106290	2722	1q33	6
44	Rattus norvegicus keratocan (predicted) (Kera_predicted), mRNA Keratocan	314771	NM_001108087	9330	7q13	6
45	PREDICTED: Macaca mulatta nuclear factor I/B, transcript variant 2 (NFIB), mRNA Transcribed locus Nuclear factor I/B CDNA clone IMAGE:7308494	714098	XM_001111030	163682 [] 219275 40435 []	5 5 5q31	6
46	Rattus norvegicus similar to CG4768-PA (predicted) (RGD1309748_predicted), mRNA Similar to CG4768-PA	302913	NM_001106972	203785	10q12	6
47	Rattus norvegicus keratin complex 1, acidic, gene 12 (Krt1-12), mRNA Keratin 12 (Meesmann corneal dystrophy)	360625	NM_001008761	94852	10q32.1	6
48	Rattus norvegicus transketolase (Tkt), mRNA Transketolase	64524	NM_022592	5950	16p16	6
49	Bos taurus actin, gamma 1 (ACTG1), mRNA Actin, gamma 1 Transcribed locus, strongly similar to NP_031419.1 actin, beta [Mus musculus]	404122	NM_001033618	101464 106826	3 10q32.3	6
50	Rattus norvegicus PERP, TP53 apoptosis effector (predicted) (Perp_predicted), mRNA PERP, TP53 apoptosis effector	292949	NM_001106265	101762	1p12	6
51	Rattus norvegicus phosphoglucomutase 2 (Pgm2), mRNA Phosphoglucomutase 2	289632	NM_001106007	203347	14p11	6
52	Rattus norvegicus mRNA for transcription factor NF1-A1, complete cds Nuclear factor I/A	25492	AB060652	10550	5	6
53	Rattus norvegicus superoxide dismutase 2, mitochondrial (Sod2), nuclear gene encoding mitochondrial protein, mRNA Superoxide dismutase 2, mitochondrial	24787	NM_017051	10488	1q21	6
54	Transcribed locus			205882	10	6
55	Rattus norvegicus type I keratin KA16 (Ka16), mRNA Type I keratin KA11 Keratin 16	303530	NM_001008752	145402 145931	10q32.1 10q32.1	5
56	Rattus norvegicus heterogeneous nuclear ribonucleoprotein K (Hnrpk), mRNA Heterogeneous nuclear ribonucleoprotein K Transcribed locus	117282	NM_057141	11854 220287	17p14 17p14	5
57	Rat keratin (K5) mRNA, 3' end Transcribed locus, moderately similar to NP_081287.1 keratin 5 [Mus musculus]	369017	M93638	195318 [**]		5
58	Rattus norvegicus zinc finger protein 2 (AZF2) mRNA, partial cds CDNA clone IMAGE:7461677		U78113	17118	3	5
59	PREDICTED: Rattus norvegicus bromodomain adjacent to zinc finger domain, 1A (predicted) (Baz1a_predicted), mRNA Bromodomain adjacent to zinc finger domain, 1A	314126	XM_001079067	1864	6q23	5
60	Rattus norvegicus cathepsin L (Ctsl), mRNA Cathepsin L	25697	NM_013156	1294	17p14	5
61	Rattus norvegicus CD24 antigen (Cd24), mRNA CD24 molecule	25145	NM_012752	6007	20q13	5
62	Rattus norvegicus RAS p21 protein activator 2 (Rasa2), mRNA RAS p21 protein activator 2	25597	NM_001105724	161946	8q31	5
63	Rattus norvegicus procollagen, type I, alpha 2 (Col1a2), mRNA Collagen, type I, alpha 2	84352	NM_053356	107239	4q13	5
64	Rattus norvegicus prothymosin alpha (Ptma), mRNA Prothymosin alpha	29222	NM_021740	817	9q35	5
65	Rattus norvegicus SMC6 structural maintenance of chromosomes 6-like 1 (yeast) (predicted) (Smc6l1_predicted), mRNA Myxovirus (influenza virus) resistance 1	313961	NM_001108014	10373	11q12	5
66	PREDICTED: Rattus norvegicus procollagen, type IV, alpha 2 (predicted) (Col4a2_predicted), mRNA Procollagen, type IV, alpha 2	306628	XM_001076134	2237	16q12.5	5
67	Rattus norvegicus follistatin-like 1 (Fstl1), mRNA Transcribed locus Follistatin-like 1	79210	NM_024369	163736 95652	11 11q21	5
68	Rattus norvegicus matrix metallopeptidase 3 (Mmp3), mRNA Matrix metallopeptidase 3	171045	NM_133523	32086	8q11	5
69	Bos taurus splicing factor, arginine/serine-rich 2 (SFRS2), mRNA Splicing factor, arginine/serine-rich 2 (SC-35)	508312	NM_001034318	136644 [**]	10q32.3	5
70	Rattus norvegicus alpha-2-macroglobulin (A2m), mRNA Alpha-1-inhibitor III	24153	NM_012488	109457	4q42	5
71	Rattus norvegicus tropomyosin 1, alpha (Tpm1), transcript variant 2, mRNA Tropomyosin 1, alpha	24851	NM_001034069	87540	8q24	5
72	PREDICTED: Rattus norvegicus chondroitin sulfate proteoglycan 2 (Cspg2), mRNA Versican	114122	XM_001058160	35666	2q12	5
73	Rattus norvegicus complement component 1, s subcomponent (C1s), mRNA Complement component 1, s subcomponent	192262	NM_138900	4037	4q42	5
74	Rattus norvegicus core binding factor beta (Cbfb), mRNA Core binding factor beta	361391	NM_001013191	7308	19q11	5
75	Rattus norvegicus transmembrane protein 123 (Tmem123), mRNA Transmembrane protein 123	363013	NM_001014205	12767	8q11	5
76	Rattus norvegicus RT1 class II, locus Db1 (RT1-Db1), mRNA RT1 class II, locus Db1	294270	NM_001008884	33311 [**]	20p12	5
77	Rattus norvegicus vimentin (Vim), mRNA Vimentin	81818	NM_031140	2710	17q12.3	5
78	Rattus norvegicus G1 to S phase transition 1 (Gspt1), mRNA G1 to S phase transition 1	24420	NM_001003978	72491	10q11	5
79	Rattus norvegicus solute carrier family 6 (neurotransmitter transporter), member 14 (Slc6a14), mRNA Solute carrier family 6 (neurotransmitter transporter), member 14	298340	NM_001037544	103683	Xq12	5
80	Rattus norvegicus guanine nucleotide binding protein-like 3 (nucleolar) (Gnl3), mRNA Guanine nucleotide binding protein-like 3 (nucleolar)	290556	NM_175580	4110	16p16	5
81	Rattus norvegicus centaurin, delta 1 (predicted) (Centd1_predicted), mRNA Centaurin, delta 1	305367	NM_001107216	106446	14q11	5
82	SEC24 related gene family, member A (S. cerevisiae) Transcribed locus			180135 [] 7981 []	10 10	5
83	Transcribed locus			165750	3	5
84	Thioredoxin-related transmembrane protein 2			3027	3q24	5
85	Transcribed locus			21549	1	5
86	Similar to EST: CB607205		CB607205			5
87	Similar to EST: CB613448		CB613448			5
88	Unidentified CB557335					5
89	Unidentified CB579016					5
90	Rattus norvegicus Mak3 homolog (S. cerevisiae) (predicted) (Mak3_predicted), mRNA N-acetyltransferase 13	288108	NM_001105881	65040	11q21	4
91	Rattus norvegicus N-acylsphingosine amidohydrolase (acid ceramidase)-like (predicted) (Asahl_predicted), mRNA N-acylethanolamine acid amidase	497009	NM_001010967	101943	14p22	4
92	Rattus norvegicus Kruppel-like factor 3 (basic) (Klf3), mRNA Kruppel-like factor 3 (basic)	114845	NM_001105742	218431	14	4
93	Rattus norvegicus ribosomal protein L4 (Rpl4), mRNA Ribosomal protein L4	64302	NM_022510	1133	8q24	4
94	Rattus norvegicus similar to RIKEN cDNA 1600029D21 (LOC363060), mRNA Similar to RIKEN cDNA 1600029D21	363060	NM_001014209	39346	8q23	4
95	Rattus norvegicus signal sequence receptor, gamma (Ssr3), mRNA Signal sequence receptor, gamma	81784	NM_031120	3264	2q31	4
96	Rattus norvegicus polyubiquitin (Ubb), mRNA Ubiquitin B	192255	NM_138895	1253	10q23	4
97	Rattus norvegicus similar to Clast4 protein (predicted) (RGD1560908_predicted), mRNA Eukaryotic translation initiation factor 4E nuclear import factor 1	305468	NM_001107230	105097	14q21	4
98	Rattus norvegicus myosin IE (Myo1e), mRNA Myosin IE	25484	NM_173101	8737	8q24	4
99	Rattus norvegicus DEK oncogene (DNA binding) (Dek), mRNA DEK oncogene (DNA binding)	306817	NM_001004255	25099	17p13	4
100	Rattus norvegicus transformed mouse 3T3 cell double minute 2 homolog (mouse) (predicted) (Mdm2_predicted), mRNA Transformed mouse 3T3 cell double minute 2	314856	NM_001108099	91829	7q22	4

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