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Finding cDNAs

UGID:2149601     UniGene Mm.425090     Mus musculus (mouse)   Rps6
Ribosomal protein S6 (Rps6)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001109421.1 PREDICTED: similar to 40S ribosomal protein S6 isoform 6 M. mulatta 100.0 248
XP_001496413.1 PREDICTED: similar to ribosomal protein S6 E. caballus 100.0 248
XP_001480888.1 PREDICTED: hypothetical protein isoform 2 M. musculus 99.6 248

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Expression Profile: View expression levels using UniGene's EST ProfileViewer
[Show more entries with profiles like this]
Note: Highly represented in several libraries
GEO profiles: Gene expression profiles in the NCBI Gene Expression Omnibus database
cDNA Sources: embryonic tissue; mammary gland; pancreas; brain; eye; lung; testis; intestine; prostate; kidney; blood; mixed; liver; heart; extraembryonic tissue; uncharacterized tissue; muscle; thymus; bone marrow; spleen; skin; salivary gland; inner ear; adipose tissue; bone; thyroid; tongue; stomach; pineal gland; connective tissue; lymph node; molar; pituitary gland; ovary; fertilized ovum; joint; other; dorsal root ganglion; sympathetic ganglion
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 4 C3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AK028205.1 Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700057K11 product:ribosomal protein S6, full insert sequence P
AK050609.1 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:C920016E05 product:ribosomal protein S6, full insert sequence P
BC090392.1 Mus musculus ribosomal protein S6, mRNA (cDNA clone MGC:103209 IMAGE:4459055), complete cds PA
BC092050.1 Mus musculus ribosomal protein S6, mRNA (cDNA clone MGC:102571 IMAGE:3666815), complete cds PA
AK168496.1 Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920028E16 product:ribosomal protein S6, full insert sequence P
AK161991.1 Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720430M17 product:ribosomal protein S6, full insert sequence P
AK166727.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0007K02 product:ribosomal protein S6, full insert sequence P
AK166680.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0002A04 product:ribosomal protein S6, full insert sequence P
AK169624.1 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430002K22 product:ribosomal protein S6, full insert sequence P
Y00348.1 Mouse mRNA for ribosomal protein S6 P
AK013333.1 Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810452K15 product:ribosomal protein S6, full insert sequence P
AK012828.1 Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810027I03 product:ribosomal protein S6, full insert sequence P
AK012284.1 Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700023L07 product:ribosomal protein S6, full insert sequence P
BC010604.1 Mus musculus ribosomal protein S6, mRNA (cDNA clone MGC:6573 IMAGE:3481640), complete cds PA

EST sequences (10 of 1855) [Show all sequences]

CA575627.1 Clone NIA:K0633E07_IMAGE:30071958 bone marrow 5' read PM
CA580064.1 Clone NIA:K0746D11_IMAGE:30077998 bone marrow 5' read PM
CA786723.1 Clone IMAGE:6757270 heart 5' read PM
CA787149.1 Clone IMAGE:6758454 heart 5' read PM
CA787286.1 Clone IMAGE:6758730 heart 5' read PM
BY000487.1 Clone 1020007E15 heart 5' read P
BY031926.1 Clone I1C0009D14 embryonic tissue 5' read P
BY035866.1 Clone I530021E21 extraembryonic tissue 5' read P
BY040354.1 Clone I730015B01 mixed 5' read P
BY044130.1 Clone I730031F05 thymus 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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