Presentation Manager

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The 2007 meeting featured over 100 scientific presentations, technology demonstrations, and interactive sessions for real-time contributions to caBIG™ activities. For newcomers, there was a full day of introductory sessions before the meeting and additional sessions throughout. Below is the program in which Plenary presentations are viewable by clicking on the presenter's name and presentations for Breakout Sessions are linked by session title. Technology Demonstrations were live demonstrations and do not have presentations.

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Monday, February 05, 2007

7:30 a.m. - 8:30 a.m.	Continental Breakfast
8:00 a.m. - 6:00 a.m.	Registration
9:00 a.m. - 9:05 a.m.	Welcome
9:05 a.m. - 9:10 a.m.	Introduction Speakers: Gene Kraus, M.S.
9:10 a.m. - 9:40 a.m.	Overview of caBIG™ (It's BIG and Getting Bigger) Speakers: Mark Adams, Ph.D.
9:40 a.m. - 10:10 a.m.	Opportunities, Challenges & Risks (caBIG™ The Good, the Bad and the Ugly) Speakers: Bob Beck, M.D.
10:10 a.m. - 10:15 a.m.	Workspace Leads - Introduction Speakers: Leslie Derr, Ph.D. , Gene Kraus, M.S.
10:15 a.m. - 10:30 a.m.	Coffee Break
10:30 a.m. - 11:50 a.m.	caBIG™ Workspace Presentations Clinical Trials Management Systems Tissue Banks Pathology Tools Integrative Cancer Research Imaging Speakers: Meg Gronvall , Juergen Klenk, Ph.D. , Curtis Lockshin , Paul Mulhern
11:50 a.m. - 12:00 p.m.	Brief Review of the Morning Session and General Q & A Speakers: Gene Kraus, M.S.
12:00 p.m. - 12:15 p.m.	Lunch
12:15 p.m. - 12:45 p.m.	Demo Presentation of "caBIG™ in Action" Speakers: Mark Adams, Ph.D.
1:15 p.m. - 1:30 p.m.	Morning Recap and Afternoon Introduction Speakers: Gene Kraus, M.S.
1:30 p.m. - 2:50 p.m.	caBIG™ Workspace Presentations Data Sharing and Intellectual Capital Vocabularies Common Data Elements/Architecture (joint presentation) caGrid - Here's the "G" in caBIG™ Documentation & Training Speakers: Marsha Young , Brian Davis, Ph.D. , Mike Keller, Ph.D. , Arumani Manisundaram , Jenny Tucker
2:50 p.m. - 3:10 p.m.	caBIG™ - Building a Community Environment Speakers: Leslie Derr, Ph.D.
3:10 p.m. - 3:30 p.m.	Break
3:30 p.m. - 4:00 p.m.	A caBIG™ Success Story - caTRIP From Soup to Nuts Speakers: Patrick McConnell
4:00 p.m. - 4:30 p.m.	Panel Discussion
4:30 p.m.	Wrap-up Speakers: Mary Jo Deering, Ph.D.
6:00 p.m. - 7:00 p.m.	Welcome Session and Recognition Awards
7:00 p.m. - 8:30 p.m.	Opening Reception with Poster Presentations & Exhibits

Tuesday, February 06, 2007

7:30 a.m. - 8:30 a.m.

Continental Breakfast with Poster Presentations & Exhibits

8:30 a.m. - 9:30 a.m.

Plenary Session I

Speakers: John Loonsk, M.D., Director of Interoperability and Standards, Office of the National Coordinator for Health Information Technology, DHHS , Kenneth H. Buetow, Ph.D., Associate Director for Biomedical Informatics and Information Technology, NCI

9:45 a.m. - 11:00 a.m.

Breakout Session
(Newcomers) What Does caBIG™ Compatibility Mean?	caBIG™ and Onocology Nursing: Addressing Needs, Providing Solutions	Developing caBIG™ Grid Services for Beginners (Hands On)	Digital Imaging: How It Relates to Pathology	Large-Scale Model Harmonization: Ensuring Interoperability Across the Enterprise	Patient Privacy and Informed Consent
Lewis Frey, Ph.D., Salvatore Mungal, M.S., Tashin Kurc, Ph.D.	Deb Whippen	Scott Oster, Shannon Hastings, Stephen Langella, David Ervin	Fred Prior, Mitchell Schnall, Ulysses Balis, Jules Berman, Bruce Beckwith	Charlie Mead, Douglas Fridsma, Rakesh Nagarajan, Christopher Chute, MD, Ph.D., George A. Komatsoulis, Ph.D.	Michael Becich, Elaine Brock, John Speakman, Rachel Nosowsky, Tristan Fiedler, Deborah Collyar

Technology Demo (Presented Live - No Presentation Available)
caAdapter	caTRIP	Information Warehouse Application of caGrid: A Prototype Implementation	The SAFE Credential Issuance Process Demonstration

11:15 a.m. - 12:30 p.m.

Breakout Session
(Newcomers) What Does caBIG™ Compatibility Mean for the Program Manager	caBIG™ Mentoring	caTRIP: Lessons Learned About Collaboration (Real Challenges Around Collaboration)	Creating Client Applications for caGrid: Case Study	Digital Pathology
George Komatsoulis, Ph.D.	Jennifer Tucker, Leslie Derr, Dianne Reeves, Salvatore Mungal, M.S., Jessica Bondy, Paul Courtney	Patrick McConnell, Ram Chilukuri, Raj Dash, Robert Annechiarico, Kimberly Johnson	Manav Kher, Rakesh Nagarajan	Michael Becich, Ricardo Ochoa, Mohan Uttawar, Mike Feidman

Technology Demo (Presented Live - No Presentation Available)
A Patient Study Calendar Module for Clinical Trials	Bringing Bioconductor to caBIG™	Microarray Analysis with GenePattern on caGrid	United Kingdom CancerGrid: Progress Toward International Data Sharing in Cancer Clinical Trials

12:30 p.m. - 2:00 p.m.

Lunch Break

2:00 p.m. - 3:00 p.m.

Plenary Session II

Speakers: Mark Boguski, M.D., Ph.D., Vice President and Global Head of Genome and Proteome Sciences, Novartis Institutes for BioMedical Research

3:15 p.m. - 4:30 p.m.

Breakout Session
Advanced Topics in Developing caBIG™ Grid Services (Hands On)	caBIG™ Documentation, Training, and Tools Outreach: A Tutorial	caBIG™: Envisioning the Future	How caBIG™ Tools Facilitate Interoperability Across Tissue Banks	Reshaping Clinical Trials: The Clinical Trials Working Group Report and Four Informatics Initiatives	The Silver-Level Compatibility Review Process within VCDE and Architecture Workspaces: Past, Present and Future
Scott Oster, Shannon Hastings, Stephen Langella, David Ervin	Jennifer Tucker, Leslie Derr, Jill Hadfield	Joel Saltz, M.D., Ph.D., Michael Becich, Robert Beck, M.D., Joyce Niland, Ph.D., Christopher Chute, M.D., Ph.D.	Warren Kibbe, Ph.D., Robert H. Lurie, David Steffen, Ph.D., Robert Dennis, Ph.D., Wesley Fang	George Komatsoulis, Ph.D., Meg Gronvall, Charlie Mead, Christo Andonyadis, John Speakman, Sheila Prindiville	Lewis Frey, Ph.D., Robert Freimuth, Baris Suzek, Patrick McConnell, Salvatore Mungal, Tahsin Kurc, Ph.D.

Technology Demo (Presented Live - No Presentation Available)
CTMS Vendor Demos I	Demonstrating caBIG™ Interoperability Across the Enterprise	GeneConnect	geWorkbench: a caGrid-Enabled Platform for Integrated Genomics

4:45 p.m. - 6:00 p.m.

Breakout Session
(Newcomers) What Does caBIG™ Compatibility Mean? Making Data Available Through caBIG™ Interfaces	Business Opportunities in the caBIG™ Enterprise	caGrid 1.0 Security Infrastructure and Policy	Data Sharing and Intellectual Property	Development and Adoption of Tissue Bank-Integrated Tools Suite
Lewis Frey, Ph.D., Robert Freimuth, Baris Suzek, Salvatore Mungal, M.S., Tahsin Kurc, Ph.D.	Mark Adams	Scott Oster, Shannon Hastings, Stephen Langella, Joshua Phillips	Mary Lou Smith, Patricia Weeks, Richard Lambert, Jo Anne Zujewski	Jack London, Lisa Miranda, Rakesh Nagarajan, M.D., Ph.D., Linda Schmandt, Gunther Schadow, Mark Watson

Technology Demo (Presented Live - No Presentation Available)
caB2B: caBench-to-Bedside	LexBIG: Shared Vocabulary Resources	The CTMS Interoperability Project - A Clinical Informatics Framework for Data and Process Integration	Using caIntegrator Framework to Build Translational Study Portals and API

6:00 p.m. - 8:00 p.m.

Reception with Poster Presentations & Exhibits

8:00 p.m. - 10:00 p.m.

Hack-a-thon

Wednesday, February 07, 2007

7:30 a.m. - 8:30 a.m.

Continental Breakfast with Poster Presentations & Exhibits

8:30 a.m. - 9:45 a.m.

Plenary Session III

Speakers: Peter A. Covitz, Ph.D., Chief Operating Officer, NCI Center for Bioinformatics , Elias A. Zerhouni, M.D., Director, National Institutes of Health

10:00 a.m. - 11:15 a.m.

Breakout Session
caGrid 1.0 Reference Implementations: How We Got on the Grid	Part A: Case Study on the End-to-End Process for Building a Silver-Level Compatible System	Commercial Silver Certification	Evaluation of Vocabulary as caBIG™ Standards	Imaging Workspace Update and Overview	IRB Issues in Data Sharing and Security Policy	User-Centered Design: Purposes, Principles and Practices
Scott Oster, Patrick McConnell, Rakesh Nagarajan, Tony Pan, Ted Liefeld, Kiran Keshav, Ram Chilukuri	Lewis Frey, Ph.D., Robert Freimuth, Baris Suzek, Brian Davis, Ph.D., Salvatore Mungal, M.S.	George Komatsoulis, Ph.D.	Olivier Bodenreider, Martin Ringwald	Eliot Siegel M.D., Joel Saltz, M.D., Ph.D., Fred Prior, Stephan Erberich, Ph.D., David Channin, M.D.	Frank Manion, Diane Paul, Warren Kibbe, Ph.D., Lisa Miranda, Jack London, Raj Dash	Ben Shneiderman, Ph.D.

Technology Demo (Presented Live - No Presentation Available)
Cancer Central Clinical Participant Registry	Integrating GenePattern with caintegrator Analysis Services	Introduce: Creating caBIG™ Gold-Level Grid Services	Translational Data Mart

11:30 a.m. - 12:45 p.m.

Breakout Session
CTMS Interoperability	Sharing Data in the Integrated Tissue Bank Tool Suite	Grids: Present and Future	Information Visualization	Metadata Reuse	Part B: Case Study on Grid-Enabling Your Silver-Level Compatible System
Charlie Mead, Warren Kibbe, Ph.D., John Speakman, Sharon Elcombe, Rhoda Arzoomanian, Jo Anne Zujewski	Bruce Trock, Jorge Gomez, Wilma Lingle	Joel Saltz, M.D., Ph.D.	Ben Shneiderman, Ph.D.	Lewis Frey, Ph.D., George Komatsoulis, Ph.D., Baris Suzek, Brian Davis, Ph.D., Linda Schmandt, Tommie Curtis, M.S., Ted Liefeld, Clair Wolfe	Scott Oster, Patrick McConnell, Shannon Hastings, Tahsin Kurc, Ph.D.

Technology Demo (Presented Live - No Presentation Available)
caTissue: An Integrated Application for Biospecimen Management	Demonstrating caGrid Workflow from an End-User Perspective	NCIA and Core Middleware (caGrid)	XIP: A Toolkit for Rapid Application Development

12:45 p.m. - 2:00 p.m.

Lunch Break

2:00 p.m. - 3:15 p.m.

Breakout Session
Overview of caGrid Workflow Infrastructure: Orchestrating Workflow	The Role of the BRIDG Model in the Development of Service-Oriented Architecture	caBIG™ Imaging Workspace and Cooperative Clinical Research	Federated Terminology Development and Deployment	The Cancer Genome Atlas	Working Session: Keeping Tools Current—Managing Mature caBIG™ Tool Compatibility in the Enterprise Environment
Patrick McConnell, Shannon Hastings, Ravi Madduri	George Komatsoulis, Ph.D., Douglas Fridsma, Smita Hastak, Christo Andonyadis, Julie Evans	Joel Saltz, M.D., Ph.D., James Purdy, Ph.D., Brenda Young, Stephan Erberich, Ph.D., Thomas FitzGerald, M.D., Michael Knopp, M.D., Ph.D.	Olivier Bodenreider, Gilberto Fragoso, Harold Solbrig, Thomas Johnson	Peter A. Covitz, Ph.D., Carl Schaefer, Ian Fore, Subha Madhavan, Peter Good, Martin Ferguson	Robert Freimuth, Jennifer Tucker, Otto Kroeger, Jim Harrison, Charlie Mead, Michael Keller

Technology Demo (Presented Live - No Presentation Available)
caBIG™ IVI Workspace Core Middleware Development: GridImage/CAD	CTMS Vendor Demos II	Service-Oriented Architecture for Integrating LIMS Sequencing Analysis	The caBIG™ VCDE and Architecture Silver-Level Criteria

3:30 p.m. - 4:45 p.m.

Breakout Session
(1) caGrid Service Architecture, (2) caGrid 1.0 Metadata Infrastructure, and (3) Object Identifiers for caGrid 1.0 Overview and caBIO: Case Study	Approaches to Deidentification	Engaging End-Users	How caBIG™ Can Adopt External Standards	XIP and AIM Development
Scott Oster, Shannon Hastings, Stephen Langella, David Ervin, Joshua Phillips		Rakesh Nagarajan, Martin Morgan, Ted Liefeld, Aris Floratos, Ph.D.	George Komatsoulis, Ph.D., Tahsin Kurc, Ph.D., Xin Zheng, Ph.d., Tommie Curtis, M.S.	Fred Prior, Lawrence Tarbox, Ph.D., John Pearson, Ph.D., Gianluca Paladini, David Channin, M.D.

Technology Demo (Presented Live - No Presentation Available)
caBIG™ Bronze-Certified BioXM Knowledge Environment: NCI Cancer Gene Index and PDQ	caBIG™ IVI Workspace Testbed Cooperative Oncology Group Applications	Eligibility Determination Using an Oncology EMR Linked to a caBIG™–Certified Clinical Trial Database	Using caGrid to Build Applications: A Case Study

4:45 p.m.

Meeting Adjourns