| | Research Articles Validation of the SCID-hu Thy/Liv Mouse Model with Four Classes of Licensed Antiretrovirals Cheryl A. Stoddart, Cheryl A. Bales, Jennifer C. Bare, George Chkhenkeli, Sofiya A. Galkina, April N. Kinkade, Mary E. Moreno, José M. Rivera, Rollie E. Ronquillo, Barbara Sloan, and Paul L. Black PMCID: PMC1925140 Prediction of Cyclin-Dependent Kinase Phosphorylation Substrates Emmanuel J. Chang, Rashida Begum, Brian T. Chait, and Terry Gaasterland PMCID: PMC1924601 Cadherin-9 Is a Novel Cell Surface Marker for the Heterogeneous Pool of Renal Fibroblasts Cornelia Thedieck, Hubert Kalbacher, Markus Kuczyk, Gerhard A. Müller, Claudia A. Müller, and Gerd Klein PMCID: PMC1924602 A Unique Role for Nonmuscle Myosin Heavy Chain IIA in Regulation of Epithelial Apical Junctions Andrei I. Ivanov, Moshe Bachar, Brian A. Babbin, Robert S. Adelstein, Asma Nusrat, and Charles A. Parkos PMCID: PMC1920554 Genome Sequence of Fusobacterium nucleatum Subspecies Polymorphum — a Genetically Tractable Fusobacterium Sandor E. Karpathy, Xiang Qin, Jason Gioia, Huaiyang Jiang, Yamei Liu, Joseph F. Petrosino, Shailaja Yerrapragada, George E. Fox, Susan Kinder Haake, George M. Weinstock, and Sarah K. Highlander PMCID: PMC1924603 p53 Target Gene SMAR1 Is Dysregulated in Breast Cancer: Its Role in Cancer Cell Migration and Invasion Kamini Singh, Devraj Mogare, Ramprasad Obula Giridharagopalan, Rajinikanth Gogiraju, Gopal Pande, and Samit Chattopadhyay PMCID: PMC1924604 An Inhibitory Sex Pheromone Tastes Bitter for Drosophila Males Fabien Lacaille, Makoto Hiroi, Robert Twele, Tsuyoshi Inoshita, Daisuke Umemoto, Gérard Manière, Frédéric Marion-Poll, Mamiko Ozaki, Wittko Francke, Matthew Cobb, Claude Everaerts, Teiichi Tanimura, and Jean-François Ferveur PMCID: PMC1937024 Obstetrician-Assessed Maternal Health at Pregnancy Predicts Offspring Future Health Debbie A. Lawlor, Susan Morton, G. David Batty, Sally Macintyre, Heather Clark, and George Davey Smith PMCID: PMC1930150 A Novel Lineage of Proteobacteria Involved in Formation of Marine Fe-Oxidizing Microbial Mat Communities David Emerson, Jeremy A. Rentz, Timothy G. Lilburn, Richard E. Davis, Henry Aldrich, Clara Chan, and Craig L. Moyer PMCID: PMC1930151 Engineering the Melanocortin-4 Receptor to Control Constitutive and Ligand-Mediated Gs Signaling In Vivo Supriya Srinivasan, Pamela Santiago, Cecile Lubrano, Christian Vaisse, and Bruce R. Conklin PMCID: PMC1930153 HIV-1 Protease and Reverse Transcriptase Control the Architecture of Their Nucleocapsid Partner Gilles Mirambeau, Sébastien Lyonnais, Dominique Coulaud, Laurence Hameau, Sophie Lafosse, Josette Jeusset, Isabelle Borde, Michèle Reboud-Ravaux, Tobias Restle, Robert J. Gorelick, and Eric Le Cam PMCID: PMC1940317 Synaptic Transmission and Plasticity in an Active Cortical Network Ramon Reig and Maria V. Sanchez-Vives PMCID: PMC1925142 Analysis of Expressed Sequence Tags of the Cyclically Parthenogenetic Rotifer Brachionus plicatilis Koushirou Suga, David Mark Welch, Yukari Tanaka, Yoshitaka Sakakura, and Atsushi Hagiwara PMCID: PMC1925144 Aseptic Meningitis in Children: Analysis of 506 Cases Athanasios G. Michos, Vassiliki P. Syriopoulou, Christos Hadjichristodoulou, George L. Daikos, Evagelia Lagona, Panagiotis Douridas, Glykeria Mostrou, and Maria Theodoridou PMCID: PMC1933255 Auditory Spatial Acuity Approximates the Resolving Power of Space-Specific Neurons Avinash D. S. Bala, Matthew W. Spitzer, and Terry T. Takahashi PMCID: PMC1925148 Functional Associations by Response Overlap (FARO), a Functional Genomics Approach Matching Gene Expression Phenotypes Henrik Bjørn Nielsen, John Mundy, and Hanni Willenbrock PMCID: PMC1924877 The Evolution of Gene Expression QTL in Saccharomyces cerevisiae James Ronald and Joshua M. Akey PMCID: PMC1925141 Parts, Wholes, and Context in Reading: A Triple Dissociation Denis G. Pelli and Katharine A. Tillman PMCID: PMC1924878 External Contamination in Single Cell mtDNA Analysis Yong-Gang Yao, Hans-Jürgen Bandelt, and Neal S. Young PMCID: PMC1930155 A Framework for Exploring Functional Variability in Olfactory Receptor Genes Orna Man, David C. Willhite, Chiquito J. Crasto, Gordon M. Shepherd, and Yoav Gilad PMCID: PMC1925143 Cathepsin K Null Mice Show Reduced Adiposity during the Rapid Accumulation of Fat Stores Marcella Funicello, Michela Novelli, Maurizio Ragni, Teresa Vottari, Cesare Cocuzza, Joaquin Soriano-Lopez, Chiara Chiellini, Federico Boschi, Pasquina Marzola, Pellegrino Masiello, Paul Saftig, Ferruccio Santini, Rene St-Jacques, Sylvie Desmarais, Nicolas Morin, Joseph Mancini, M. David Percival, Aldo Pinchera, and Margherita Maffei PMCID: PMC1925145 Directed Cortical Information Flow during Human Object Recognition: Analyzing Induced EEG Gamma-Band Responses in Brain's Source Space Gernot G. Supp, Alois Schlögl, Nelson Trujillo-Barreto, Matthias M. Müller, and Thomas Gruber PMCID: PMC1925146 Mutations in the UBIAD1 Gene, Encoding a Potential Prenyltransferase, Are Causal for Schnyder Crystalline Corneal Dystrophy Andrew Orr, Marie-Pierre Dubé, Julien Marcadier, Haiyan Jiang, Antonio Federico, Stanley George, Christopher Seamone, David Andrews, Paul Dubord, Simon Holland, Sylvie Provost, Vanessa Mongrain, Susan Evans, Brent Higgins, Sharen Bowman, Duane Guernsey, and Mark Samuels PMCID: PMC1925147 Rate of Decline of the Oriental White-Backed Vulture Population in India Estimated from a Survey of Diclofenac Residues in Carcasses of Ungulates Rhys E. Green, Mark A. Taggart, Kalu Ram Senacha, Bindu Raghavan, Deborah J. Pain, Yadvendradev Jhala, and Richard Cuthbert PMCID: PMC1930156 Lectin-Based Food Poisoning: A New Mechanism of Protein Toxicity Katsuya Miyake, Toru Tanaka, and Paul L. McNeil PMCID: PMC1933252 An Ultra-High Discrimination Y Chromosome Short Tandem Repeat Multiplex DNA Typing System Erin K. Hanson and Jack Ballantyne PMCID: PMC1925149 GDNF Secreting Human Neural Progenitor Cells Protect Dying Motor Neurons, but Not Their Projection to Muscle, in a Rat Model of Familial ALS Masatoshi Suzuki, Jacalyn McHugh, Craig Tork, Brandon Shelley, Sandra M. Klein, Patrick Aebischer, and Clive N. Svendsen PMCID: PMC1925150 The Tricarboxylic Acid Cycle, an Ancient Metabolic Network with a Novel Twist Ryan J. Mailloux, Robin Bériault, Joseph Lemire, Ranji Singh, Daniel R. Chénier, Robert D. Hamel, and Vasu D. Appanna PMCID: PMC1930152 Systematic Association Mapping Identifies NELL1 as a Novel IBD Disease Gene Andre Franke, Jochen Hampe, Philip Rosenstiel, Christian Becker, Florian Wagner, Robert Häsler, Randall D. Little, Klaus Huse, Andreas Ruether, Tobias Balschun, Michael Wittig, Abdou ElSharawy, Gabriele Mayr, Mario Albrecht, Natalie J. Prescott, Clive M. Onnie, Hélène Fournier, Tim Keith, Uwe Radelof, Matthias Platzer, Christopher G. Mathew, Monika Stoll, Michael Krawczak, Peter Nürnberg, and Stefan Schreiber PMCID: PMC1933598 Altered T-Cell Function in Schizophrenia: A Cellular Model to Investigate Molecular Disease Mechanisms Rachel M. Craddock, Helen E. Lockstone, David A. Rider, Matthew T. Wayland, Laura J.W. Harris, Peter J. McKenna, and Sabine Bahn PMCID: PMC1930154 Artesunate Induces ROS-Mediated Apoptosis in Doxorubicin-Resistant T Leukemia Cells Thomas Efferth, Marco Giaisi, Annette Merling, Peter H. Krammer, and Min Li-Weber PMCID: PMC1933253 Changing Hydrozoan Bauplans by Silencing Hox-Like Genes Wolfgang Jakob and Bernd Schierwater PMCID: PMC1931613 Neuroarchitecture of Peptidergic Systems in the Larval Ventral Ganglion of Drosophila melanogaster Jonathan G. Santos, Matthias Vömel, Rafael Struck, Uwe Homberg, Dick R. Nässel, and Christian Wegener PMCID: PMC1933254 Stress Generation and Filament Turnover during Actin Ring Constriction Alexander Zumdieck, Karsten Kruse, Henrik Bringmann, Anthony A. Hyman, and Frank Jülicher PMCID: PMC1936222 In Vitro Human Keratinocyte Migration Rates Are Associated with SNPs in the KRT1 Interval Heng Tao, Anthony J. Berno, David R. Cox, and Kelly A. Frazer PMCID: PMC1933256 Intense Sweetness Surpasses Cocaine Reward Magalie Lenoir, Fuschia Serre, Lauriane Cantin, and Serge H. Ahmed PMCID: PMC1931610 A Compact Multiphoton 3D Imaging System for Recording Fast Neuronal Activity Dejan Vučinić and Terrence J. Sejnowski PMCID: PMC1933593 Homeostatic Plasticity Studied Using In Vivo Hippocampal Activity-Blockade: Synaptic Scaling, Intrinsic Plasticity and Age-Dependence Julio Echegoyen, Axel Neu, Kevin D. Graber, and Ivan Soltesz PMCID: PMC1933594 Wolbachia-Induced Unidirectional Cytoplasmic Incompatibility and Speciation: Mainland-Island Model Arndt Telschow, Matthias Flor, Yutaka Kobayashi, Peter Hammerstein, and John H. Werren PMCID: PMC1934337 Mammalian Comparative Sequence Analysis of the Agrp Locus Christopher B. Kaelin, Gregory M. Cooper, Arend Sidow, and Gregory S. Barsh PMCID: PMC1931611 Cis-Cotranscription of Two Beta Globin Genes during Chicken Primitive Hematopoiesis Hiroki Nagai and Guojun Sheng PMCID: PMC1934934 Disparate Effects of p24α and p24δ on Secretory Protein Transport and Processing Jeroen R. P. M. Strating, Gerrit Bouw, Theo G. M. Hafmans, and Gerard J. M. Martens PMCID: PMC1933603 The Murine Gammaherpesvirus-68 gp150 Acts as an Immunogenic Decoy to Limit Virion Neutralization Laurent Gillet, Janet S. May, Susanna Colaco, and Philip G. Stevenson PMCID: PMC1931612 Effect of a Simple Information Booklet on Pain Persistence after an Acute Episode of Low Back Pain: A Non-Randomized Trial in a Primary Care Setting Emmanuel Coudeyre, Florence Tubach, François Rannou, Gabriel Baron, Fernand Coriat, Sylvie Brin, Michel Revel, and Serge Poiraudeau PMCID: PMC1939729 Extended Follow-Up Following a Phase 2b Randomized Trial of the Candidate Malaria Vaccines FP9 ME-TRAP and MVA ME-TRAP among Children in Kenya Philip Bejon, Edna Ogada, Tabitha Mwangi, Paul Milligan, Trudie Lang, Greg Fegan, Sarah C. Gilbert, Norbert Peshu, Kevin Marsh, and Adrian V.S. Hill PMCID: PMC1940326 Extensive Gains and Losses of Olfactory Receptor Genes in Mammalian Evolution Yoshihito Niimura and Masatoshi Nei PMCID: PMC1933591 Molecular Components and Functions of the Endocannabinoid System in Mouse Prefrontal Cortex Mathieu Lafourcade, Izaskun Elezgarai, Susana Mato, Yamina Bakiri, Pedro Grandes, and Olivier J. Manzoni PMCID: PMC1933592 Biometric Evidence that Sexual Selection Has Shaped the Hominin Face Eleanor M. Weston, Adrian E. Friday, and Pietro Liò PMCID: PMC1937021 Regional Decline of Coral Cover in the Indo-Pacific: Timing, Extent, and Subregional Comparisons John F. Bruno and Elizabeth R. Selig PMCID: PMC1933595 A Novel Role for Connexin Hemichannel in Oxidative Stress and Smoking-Induced Cell Injury Srinivasan Ramachandran, Lai-Hua Xie, Scott A. John, Shankar Subramaniam, and Ratnesh Lal PMCID: PMC1933596 Systems Analysis of N-Glycan Processing in Mammalian Cells Patrick Hossler, Bhanu Chandra Mulukutla, and Wei-Shou Hu PMCID: PMC1933599 Dynamic and Polarized Muscle Cell Behaviors Accompany Tail Morphogenesis in the Ascidian Ciona intestinalis Yale J. Passamaneck, Anna-Katerina Hadjantonakis, and Anna Di Gregorio PMCID: PMC1934933 Detection of Aortic Calcification during Vertebral Fracture Assessment (VFA) Compared to Digital Radiography John T. Schousboe, Kevin E. Wilson, and Thomas N. Hangartner PMCID: PMC1933602 A New Classification System for the Actions of IRS Chemicals Traditionally Used For Malaria Control John P. Grieco, Nicole L. Achee, Theeraphap Chareonviriyaphap, Wannapa Suwonkerd, Kamal Chauhan, Michael R. Sardelis, and Donald R. Roberts PMCID: PMC1934935 Acoel Flatworms Are Not Platyhelminthes: Evidence from Phylogenomics Hervé Philippe, Henner Brinkmann, Pedro Martinez, Marta Riutort, and Jaume Baguñà PMCID: PMC1933604 An “Electronic Fluorescent Pictograph” Browser for Exploring and Analyzing Large-Scale Biological Data Sets Debbie Winter, Ben Vinegar, Hardeep Nahal, Ron Ammar, Greg V. Wilson, and Nicholas J. Provart PMCID: PMC1934936 A Randomised Placebo-Controlled Trial of a Traditional Chinese Herbal Formula in the Treatment of Primary Dysmenorrhoea Lan Lan Liang Yeh, Jah-Yao Liu, Kao-Si Lin, Yu-Shen Liu, Jeng-Min Chiou, Kung-Yee Liang, Te-Feng Tsai, Li-Hsiang Wang, Chiung-Tong Chen, and Ching-Yi Huang PMCID: PMC1940310 Rapid Evolution of Spermathecal Duct Length in the Allonemobius socius Complex of Crickets: Species, Population and Wolbachia Effects Jeremy L. Marshall PMCID: PMC1934930 Plasticity of the Intrinsic Period of the Human Circadian Timing System Frank A.J.L. Scheer, Kenneth P. Wright, Jr., Richard E. Kronauer, and Charles A. Czeisler PMCID: PMC1934931 Global Profiling of DNA Replication Timing and Efficiency Reveals that Efficient Replication/Firing Occurs Late during S-Phase in S. pombe Majid Eshaghi, R. Krishna M. Karuturi, Juntao Li, Zhaoqing Chu, Edison T. Liu, and Jianhua Liu PMCID: PMC1934932 Development of Neural Circuitry for Precise Temporal Sequences through Spontaneous Activity, Axon Remodeling, and Synaptic Plasticity Joseph K. Jun and Dezhe Z. Jin PMCID: PMC1933597 Using Single loxP Sites to Enhance Homologous Recombination: ts Mutants in Sec1 of Dictyostelium discoideum Mark S. Bretscher and Margaret Clotworthy PMCID: PMC1933600 Cellular Immune Responses Induced with Dose-Sparing Intradermal Administration of HIV Vaccine to HIV-Uninfected Volunteers in the ANRS VAC16 Trial Odile Launay, Christine Durier, Corinne Desaint, Benjamin Silbermann, Angela Jackson, Gilles Pialoux, Bénédicte Bonnet, Isabelle Poizot-Martin, Gustavo Gonzalez-Canali, Lise Cuzin, Suzanne Figuereido, Mathieu Surenaud, Nadine Ben Hamouda, Hanne Gahery, Jeannine Choppin, Dominique Salmon, Corinne Guérin, Isabelle Bourgault Villada, Jean-Gérard Guillet, and for the ANRS VAC16 Study Group PMCID: PMC1942115 A Decline in CCL3-5 Chemokine Gene Expression during Primary Simian-Human Immunodeficiency Virus Infection Wei Zhao, Bapi Pahar, Juan T. Borda, Xavier Alvarez, and Karol Sestak PMCID: PMC1933601 STAT5 Is an Ambivalent Regulator of Neutrophil Homeostasis Laurence Fiévez, Christophe Desmet, Emmanuelle Henry, Bernard Pajak, Silke Hegenbarth, Virginie Garzé, Françoise Bex, Fabrice Jaspar, Philippe Boutet, Laurent Gillet, Alain Vanderplasschen, Percy A. Knolle, Oberdan Leo, Muriel Moser, Pierre Lekeux, and Fabrice Bureau PMCID: PMC1939728 Protistan Diversity in the Arctic: A Case of Paleoclimate Shaping Modern Biodiversity? Thorsten Stoeck, Jennifer Kasper, John Bunge, Chesley Leslin, Valya Ilyin, and Slava Epstein PMCID: PMC1940325 Transbilayer Phospholipid Movements in ABCA1-Deficient Cells Patrick Williamson, Margaret S. Halleck, Jonathan Malowitz, Susan Ng, Xiaoxuan Fan, Stephen Krahling, Alan T. Remaley, and Robert A. Schlegel PMCID: PMC1939730 Differential Drug Resistance Acquisition in HIV-1 of Subtypes B and C Esmeralda A.J.M. Soares, André F.A. Santos, Thatiana M. Sousa, Eduardo Sprinz, Ana M.B. Martinez, Jussara Silveira, Amilcar Tanuri, and Marcelo A. Soares PMCID: PMC1939879 C. elegans Agrin Is Expressed in Pharynx, IL1 Neurons and Distal Tip Cells and Does Not Genetically Interact with Genes Involved in Synaptogenesis or Muscle Function Ana Hrus, Gordon Lau, Harald Hutter, Susanne Schenk, Jacqueline Ferralli, Marianne Brown-Luedi, Ruth Chiquet-Ehrismann, and Stefano Canevascini PMCID: PMC1939731 Haplotyping a Quantitative Trait with a High-Density Map in Experimental Crosses Wei Hou, John Stephen F. Yap, Song Wu, Tian Liu, James M. Cheverud, and Rongling Wu PMCID: PMC1940312 A Gammaherpesviral Internal Repeat Contributes to Latency Amplification Nagendra N. Thakur, Susanne El-Gogo, Beatrix Steer, Klaus Freimüller, Andreas Waha, and Heiko Adler PMCID: PMC1939874 MHC Adaptive Divergence between Closely Related and Sympatric African Cichlids Jonatan Blais, Ciro Rico, Cock van Oosterhout, Joanne Cable, George F. Turner, and Louis Bernatchez PMCID: PMC1939875 Loss of Receptor on Tuberculin-Reactive T-Cells Marks Active Pulmonary Tuberculosis Mathias Streitz, Lydia Tesfa, Vedat Yildirim, Ali Yahyazadeh, Timo Ulrichs, Rodica Lenkei, Ali Quassem, Gerd Liebetrau, Laurel Nomura, Holden Maecker, Hans-Dieter Volk, and Florian Kern PMCID: PMC1936433 Exogenous Interferon-α and Interferon-γ Increase Lethality of Murine Inhalational Anthrax Jeffrey A. Gold, Yoshihiko Hoshino, Marcus B. Jones, Satomi Hoshino, Anna Nolan, and Michael D. Weiden PMCID: PMC1937023 ADaCGH: A Parallelized Web-Based Application and R Package for the Analysis of aCGH Data Ramón Díaz-Uriarte and Oscar M. Rueda PMCID: PMC1940324 Cause-Specific Excess Mortality in Siblings of Patients Co-Infected with HIV and Hepatitis C Virus Ann-Brit Eg Hansen, Nicolai Lohse, Jan Gerstoft, Gitte Kronborg, Alex Laursen, Court Pedersen, Henrik Toft Sørensen, and Niels Obel PMCID: PMC1939735 Stimulus Motion Propels Traveling Waves in Binocular Rivalry Tomas Knapen, Raymond van Ee, and Randolph Blake PMCID: PMC1937025 Wrinkly-Spreader Fitness in the Two-Dimensional Agar Plate Microcosm: Maladaptation, Compensation and Ecological Success Andrew J. Spiers PMCID: PMC1939736 Genome Dynamics of Short Oligonucleotides: The Example of Bacterial DNA Uptake Enhancing Sequences Mohammed Bakkali PMCID: PMC1939737 Speech and Non-Speech Audio-Visual Illusions: A Developmental Study Corinne Tremblay, François Champoux, Patrice Voss, Benoit A. Bacon, Franco Lepore, and Hugo Théoret PMCID: PMC1937019 Predicting Prokaryotic Ecological Niches Using Genome Sequence Analysis Garret Suen, Barry S. Goldman, and Roy D. Welch PMCID: PMC1937020 The Intersexual Genetic Correlation for Lifetime Fitness in the Wild and Its Implications for Sexual Selection Jon E. Brommer, Mark Kirkpatrick, Anna Qvarnström, and Lars Gustafsson PMCID: PMC1939732 Selection against Spurious Promoter Motifs Correlates with Translational Efficiency across Bacteria Jeffrey L. Froula and M. Pilar Francino PMCID: PMC1939733 Tailor-Made Zinc-Finger Transcription Factors Activate FLO11 Gene Expression with Phenotypic Consequences in the Yeast Saccharomyces cerevisiae Jia-Ching Shieh, Yu-Che Cheng, Mao-Chang Su, Michael Moore, Yen Choo, and Aaron Klug PMCID: PMC1939876 Transmission Heterogeneity and Control Strategies for Infectious Disease Emergence Luca Bolzoni, Leslie Real, and Giulio De Leo PMCID: PMC1945090 DNA Replication Stress Is a Determinant of Chronological Lifespan in Budding Yeast Martin Weinberger, Li Feng, Anita Paul, Daniel L. Smith, Jr., Robert D. Hontz, Jeffrey S. Smith, Marija Vujcic, Keshav K. Singh, Joel A. Huberman, and William C. Burhans PMCID: PMC1939877 3-D Ultrastructure of O. tauri: Electron Cryotomography of an Entire Eukaryotic Cell Gregory P. Henderson, Lu Gan, and Grant J. Jensen PMCID: PMC1939878 The Costs, Benefits, and Cost-Effectiveness of Interventions to Reduce Maternal Morbidity and Mortality in Mexico Delphine Hu, Stefano M. Bertozzi, Emmanuela Gakidou, Steve Sweet, and Sue J. Goldie PMCID: PMC1939734 Optimal Conservation of Migratory Species Tara G. Martin, Iadine Chadès, Peter Arcese, Peter P. Marra, Hugh P. Possingham, and D. Ryan Norris PMCID: PMC1937026 Is Bacterial Persistence a Social Trait? Andy Gardner, Stuart A. West, and Ashleigh S. Griffin PMCID: PMC1937027 Long-Term Protection against HBV Chronic Carriage of Gambian Adolescents Vaccinated in Infancy and Immune Response in HBV Booster Trial in Adolescence Marianne A.B. van der Sande, Pauline A. Waight, Maimuna Mendy, Syed Zaman, Steve Kaye, Omar Sam, Abi Kahn, David Jeffries, Aveika A. Akum, Andrew J. Hall, Ebrima Bah, Samuel J. McConkey, Pierre Hainaut, and Hilton C. Whittle PMCID: PMC1940311 Biphasic Hoxd Gene Expression in Shark Paired Fins Reveals an Ancient Origin of the Distal Limb Domain Renata Freitas, GuangJun Zhang, and Martin J. Cohn PMCID: PMC1937022 CD83 Modulates B Cell Function In Vitro: Increased IL-10 and Reduced Ig Secretion by CD83Tg B Cells Birte Kretschmer, Katja Lüthje, Andreas H. Guse, Svenja Ehrlich, Friedrich Koch-Nolte, Friedrich Haag, Bernhard Fleischer, and Minka Breloer PMCID: PMC1940313 CSF Metabolic and Proteomic Profiles in Patients Prodromal for Psychosis Jeffrey T.-J. Huang, F. Markus Leweke, Tsz M. Tsang, Dagmar Koethe, Laura Kranaster, Christoph W. Gerth, Sonja Gross, Daniela Schreiber, Stephan Ruhrmann, Frauke Schultze-Lutter, Joachim Klosterkötter, Elaine Holmes, and Sabine Bahn PMCID: PMC1942084 A Threshold Value for the Time Delay to TB Diagnosis Pieter W. Uys, Robin M. Warren, and Paul D. van Helden PMCID: PMC1942086 Estimating Individual and Household Reproduction Numbers in an Emerging Epidemic Christophe Fraser PMCID: PMC1950082 Considering the Case for Biodiversity Cycles: Re-Examining the Evidence for Periodicity in the Fossil Record Bruce S. Lieberman and Adrian L. Melott PMCID: PMC1945088 Combining Phylogeography with Distribution Modeling: Multiple Pleistocene Range Expansions in a Parthenogenetic Gecko from the Australian Arid Zone Jared L. Strasburg, Michael Kearney, Craig Moritz, and Alan R. Templeton PMCID: PMC1942116 Computer-Aided Lead Optimization: Improved Small-Molecule Inhibitor of the Zinc Endopeptidase of Botulinum Neurotoxin Serotype A Jing Tang, Jewn Giew Park, Charles B. Millard, James J. Schmidt, and Yuan-Ping Pang PMCID: PMC1942119 Homosexual Women Have Less Grey Matter in Perirhinal Cortex than Heterosexual Women Jorge Ponseti, Hartwig R. Siebner, Stefan Klöppel, Stephan Wolff, Oliver Granert, Olav Jansen, Hubertus M. Mehdorn, and Hartmut A. Bosinski PMCID: PMC1942120 Epidermal Stem Cells Are Defined by Global Histone Modifications that Are Altered by Myc-Induced Differentiation Michaela Frye, Amanda G. Fisher, and Fiona M. Watt PMCID: PMC1945016 Marburg Virus Infection Detected in a Common African Bat Jonathan S. Towner, Xavier Pourrut, César G. Albariño, Chimène Nze Nkogue, Brian H. Bird, Gilda Grard, Thomas G. Ksiazek, Jean-Paul Gonzalez, Stuart T. Nichol, and Eric M. Leroy PMCID: PMC1942080 High Cooperativity of the SV40 Major Capsid Protein VP1 in Virus Assembly Santanu Mukherjee, Mahmoud Abd-El-Latif, Michal Bronstein, Orly Ben-nun-Shaul, Stanislav Kler, and Ariella Oppenheim PMCID: PMC1942081 The Princeton Protein Orthology Database (P-POD): A Comparative Genomics Analysis Tool for Biologists Sven Heinicke, Michael S. Livstone, Charles Lu, Rose Oughtred, Fan Kang, Samuel V. Angiuoli, Owen White, David Botstein, and Kara Dolinski PMCID: PMC1942082 Efficient Construction of an Inverted Minimal H1 Promoter Driven siRNA Expression Cassette: Facilitation of Promoter and siRNA Sequence Exchange Hoorig Nassanian, Ana M. Sanchez, Alice Lo, Kenneth A. Bradley, and Benhur Lee PMCID: PMC1942083 Candidate Genes for Expansion and Transformation of Hematopoietic Stem Cells by NUP98-HOX Fusion Genes Lars Palmqvist, Nicolas Pineault, Carina Wasslavik, and R. Keith Humphries PMCID: PMC1942085 Detection of Novel Amplicons in Prostate Cancer by Comprehensive Genomic Profiling of Prostate Cancer Cell Lines Using Oligonucleotide-Based ArrayCGH Joern Kamradt, Volker Jung, Kerstin Wahrheit, Laura Tolosi, Joerg Rahnenfuehrer, Martin Schilling, Robert Walker, Sean Davis, Michael Stoeckle, Paul Meltzer, and Bernd Wullich PMCID: PMC1940319 Yersinia pestis Evolution on a Small Timescale: Comparison of Whole Genome Sequences from North America Raymond K. Auerbach, Apichai Tuanyok, William S. Probert, Leo Kenefic, Amy J. Vogler, David C. Bruce, Christine Munk, Thomas S. Brettin, Mark Eppinger, Jacques Ravel, David M. Wagner, and Paul Keim PMCID: PMC1940323 Prefrontal Cortex and Somatosensory Cortex in Tactile Crossmodal Association: An Independent Component Analysis of ERP Recordings Yixuan Ku, Shinji Ohara, Liping Wang, Fred A. Lenz, Steven S. Hsiao, Mark Bodner, Bo Hong, and Yong-Di Zhou PMCID: PMC1942117 Development of Sensory, Motor and Behavioral Deficits in the Murine Model of Sanfilippo Syndrome Type B Coy D. Heldermon, Anne K. Hennig, Kevin K. Ohlemiller, Judith M. Ogilvie, Erik D. Herzog, Annalisa Breidenbach, Carole Vogler, David F. Wozniak, and Mark S. Sands PMCID: PMC1945015 Natural Variation in the Thermotolerance of Neural Function and Behavior due to a cGMP-Dependent Protein Kinase Ken Dawson-Scully, Gary A.B. Armstrong, Clement Kent, R. Meldrum Robertson, and Marla B. Sokolowski PMCID: PMC1945089 Utrophin Up-Regulation by an Artificial Transcription Factor in Transgenic Mice Elisabetta Mattei, Nicoletta Corbi, Maria Grazia Di Certo, Georgios Strimpakos, Cinzia Severini, Annalisa Onori, Agata Desantis, Valentina Libri, Serena Buontempo, Aristide Floridi, Maurizio Fanciulli, Dilair Baban, Kay E. Davies, and Claudio Passananti PMCID: PMC1942121 Expressed Sequence Tags as a Tool for Phylogenetic Analysis of Placental Mammal Evolution Morgan Kullberg, Björn Hallström, Ulfur Arnason, and Axel Janke PMCID: PMC1942079 Sequential Logic Model Deciphers Dynamic Transcriptional Control of Gene Expressions Zhen Xuan Yeo, Sum Thai Wong, Satya Nanda Vel Arjunan, Vincent Piras, Masaru Tomita, Kumar Selvarajoo, Alessandro Giuliani, and Masa Tsuchiya PMCID: PMC1945082 Evidence for a Minimal Eukaryotic Phosphoproteome? Sander H. Diks, Kaushal Parikh, Marijke van der Sijde, Jos Joore, Tita Ritsema, and Maikel P. Peppelenbosch PMCID: PMC1945084 Prevalence of Same-Sex Sexual Behavior and Associated Characteristics among Low-Income Urban Males in Peru Jesse L. Clark, Carlos F. Caceres, Andres G. Lescano, Kelika A. Konda, Segundo R. Leon, Franca R. Jones, Susan M. Kegeles, Jeffrey D. Klausner, Thomas J. Coates, and NIMH STD/HIV Collaborative Prevention Trial PMCID: PMC1945085 Low Numbers of FOXP3 Positive Regulatory T Cells Are Present in all Developmental Stages of Human Atherosclerotic Lesions Onno J. de Boer, Jelger J. van der Meer, Peter Teeling, Chris M. van der Loos, and Allard C. van der Wal PMCID: PMC1945014 A Sex-Specific Metabolite Identified in a Marine Invertebrate Utilizing Phosphorus-31 Nuclear Magnetic Resonance Robert A. Kleps, Terrell C. Myers, Romuald N. Lipcius, and Thomas O. Henderson PMCID: PMC1940318 Sterility and Gene Expression in Hybrid Males of Xenopus laevis and X. muelleri John H. Malone, Thomas H. Chrzanowski, and Pawel Michalak PMCID: PMC1940320 Condensin I Reveals New Insights on Mouse Meiotic Chromosome Structure and Dynamics Alberto Viera, Rocío Gómez, María T. Parra, John A. Schmiesing, Kyoko Yokomori, Julio S. Rufas, and José A. Suja PMCID: PMC1942118 Interphase Nucleo-Cytoplasmic Shuttling and Localization of SIRT2 during Mitosis Brian J. North and Eric Verdin PMCID: PMC1949146 Why Men Matter: Mating Patterns Drive Evolution of Human Lifespan Shripad D. Tuljapurkar, Cedric O. Puleston, and Michael D. Gurven PMCID: PMC1949148 The Relationship of Within-Host Multiplication and Virulence in a Plant-Virus System Israel Pagán, Carlos Alonso-Blanco, and Fernando García-Arenal PMCID: PMC1950075 Insights from Amphioxus into the Evolution of Vertebrate Cartilage Daniel Meulemans and Marianne Bronner-Fraser PMCID: PMC1950077 A Dimer of the Toll-Like Receptor 4 Cytoplasmic Domain Provides a Specific Scaffold for the Recruitment of Signalling Adaptor Proteins Ricardo Núñez Miguel, Joyce Wong, Julian F. Westoll, Heather J. Brooks, Luke A.J. O'Neill, Nicholas J. Gay, Clare E. Bryant, and Tom P. Monie PMCID: PMC1945083 Quadrupling Muscle Mass in Mice by Targeting TGF-ß Signaling Pathways Se-Jin Lee PMCID: PMC1949143 Phylogenomics Reshuffles the Eukaryotic Supergroups Fabien Burki, Kamran Shalchian-Tabrizi, Marianne Minge, Åsmund Skjæveland, Sergey I. Nikolaev, Kjetill S. Jakobsen, and Jan Pawlowski PMCID: PMC1949142 Protection of Hepatocytes from Cytotoxic T Cell Mediated Killing by Interferon-Alpha Christian B. Willberg, Scott M. Ward, Reginald F. Clayton, Nikolai V. Naoumov, Christopher McCormick, Sandra Proto, Mark Harris, Arvind H. Patel, and Paul Klenerman PMCID: PMC1949144 Corpus Callosum Morphology in Capuchin Monkeys Is Influenced by Sex and Handedness Kimberley A. Phillips, Chet C. Sherwood, and Alayna L. Lilak PMCID: PMC1945086 Patterns of Selection in Anti-Malarial Immune Genes in Malaria Vectors: Evidence for Adaptive Evolution in LRIM1 in Anopheles arabiensis Michel A. Slotman, Aristeidis Parmakelis, Jonathon C. Marshall, Parfait H. Awono-Ambene, Christophe Antonio-Nkondjo, Frederic Simard, Adalgisa Caccone, and Jeffrey R. Powell PMCID: PMC1945087 Radial Glial Dependent and Independent Dynamics of Interneuronal Migration in the Developing Cerebral Cortex Yukako Yokota, H.T. Ghashghaei, Christine Han, Hannah Watson, Kenneth J. Campbell, and E.S. Anton PMCID: PMC1950908 Simple Sequence Repeats Provide a Substrate for Phenotypic Variation in the Neurospora crassa Circadian Clock Todd P. Michael, Sohyun Park, Tae-Sung Kim, Jim Booth, Amanda Byer, Qi Sun, Joanne Chory, and Kwangwon Lee PMCID: PMC1949147 NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence Morten Nielsen, Claus Lundegaard, Thomas Blicher, Kasper Lamberth, Mikkel Harndahl, Sune Justesen, Gustav Røder, Bjoern Peters, Alessandro Sette, Ole Lund, and Søren Buus PMCID: PMC1949492 Molecular Characterization of a Novel Intracellular ADP-Ribosyl Cyclase Dev Churamani, Michael J. Boulware, Timothy J. Geach, Andrew C.R. Martin, Gary W. Moy, Yi-Hsien Su, Victor D. Vacquier, Jonathan S. Marchant, Leslie Dale, and Sandip Patel PMCID: PMC1949048 Role of Transferrin Receptor and the ABC Transporters ABCB6 and ABCB7 for Resistance and Differentiation of Tumor Cells towards Artesunate Gerhard Kelter, Daniel Steinbach, Venkata Badireenath Konkimalla, Tsuyoshi Tahara, Shigeru Taketani, Heinz-Herbert Fiebig, and Thomas Efferth PMCID: PMC1949049 Phage-Antibiotic Synergy (PAS): β-Lactam and Quinolone Antibiotics Stimulate Virulent Phage Growth André M. Comeau, Françoise Tétart, Sabrina N. Trojet, Marie-Françoise Prère, and H.M. Krisch PMCID: PMC1949050 Contribution of Exogenous Genetic Elements to the Group A Streptococcus Metagenome Stephen B. Beres and James M. Musser PMCID: PMC1949102 Kinetic Analysis of Yersinia pestis DNA Adenine Methyltransferase Activity Using a Hemimethylated Molecular Break Light Oligonucleotide Robert J. Wood, Michael D. Maynard-Smith, Victoria L. Robinson, Petra C.F. Oyston, Rick W. Titball, and Peter L. Roach PMCID: PMC1949145 TrpC3 Regulates Hypertrophy-Associated Gene Expression without Affecting Myocyte Beating or Cell Size Jacob S. Brenner and Ricardo E. Dolmetsch PMCID: PMC1950081 Whole Blood Interferon-Gamma Assay for Baseline Tuberculosis Screening among Japanese Healthcare Students Katsuyuki Hotta, Toshio Ogura, Kenji Nishii, Tsuyoshi Kodani, Masaru Onishi, Yukito Shimizu, Arihiko Kanehiro, Katsuyuki Kiura, Mitsune Tanimoto, and Kazuo Tobe PMCID: PMC1950083 Detection of a MicroRNA Signal in an In Vivo Expression Set of mRNAs Tsunglin Liu, Thales Papagiannakopoulos, Kathy Puskar, Shuping Qi, Fernando Santiago, William Clay, Kaiqin Lao, Yohan Lee, Stanley F. Nelson, Harley I. Kornblum, Frank Doyle, Linda Petzold, Boris Shraiman, and Kenneth S. Kosik PMCID: PMC1950084 Prevalence of Abnormal Radiological Findings in Health Care Workers with Latent Tuberculosis Infection and Correlations with T Cell Immune Response Rajnish Joshi, Samir Patil, Shriprakash Kalantri, Kevin Schwartzman, Dick Menzies, and Madhukar Pai PMCID: PMC1950085 Primary Role of Functional Ischemia, Quantitative Evidence for the Two-Hit Mechanism, and Phosphodiesterase-5 Inhibitor Therapy in Mouse Muscular Dystrophy Akihiro Asai, Nita Sahani, Masao Kaneki, Yasuyoshi Ouchi, J.A. Jeevendra Martyn, and Shingo Egusa Yasuhara PMCID: PMC1950086 Wide-Scale Analysis of Human Functional Transcription Factor Binding Reveals a Strong Bias towards the Transcription Start Site Yuval Tabach, Ran Brosh, Yossi Buganim, Anat Reiner, Or Zuk, Assif Yitzhaky, Mark Koudritsky, Varda Rotter, and Eytan Domany PMCID: PMC1950076 Characterization of a Family of Novel Cysteine- Serine-Rich Nuclear Proteins (CSRNP) Sébastien Gingras, Stéphane Pelletier, Kelli Boyd, and James N. Ihle PMCID: PMC1950078 GAD1 mRNA Expression and DNA Methylation in Prefrontal Cortex of Subjects with Schizophrenia Hsien-Sung Huang and Schahram Akbarian PMCID: PMC1950080 Development of New Mouse Lung Tumor Models Expressing EGFR T790M Mutants Associated with Clinical Resistance to Kinase Inhibitors Lucia Regales, Marissa N. Balak, Yixuan Gong, Katerina Politi, Ayana Sawai, Carl Le, Jason A. Koutcher, David B. Solit, Neal Rosen, Maureen F. Zakowski, and William Pao PMCID: PMC1950079 Host Transcript Accumulation during Lytic KSHV Infection Reveals Several Classes of Host Responses Sanjay Chandriani and Don Ganem PMCID: PMC1950738 Insulin Resistance and Body Fat Distribution in South Asian Men Compared to Caucasian Men Manisha Chandalia, Ping Lin, Thanalakshmi Seenivasan, Edward H. Livingston, Peter G. Snell, Scott M. Grundy, and Nicola Abate PMCID: PMC1950568 The Antibacterial Protein Lysozyme Identified as the Termite Egg Recognition Pheromone Kenji Matsuura, Takashi Tamura, Norimasa Kobayashi, Toshihisa Yashiro, and Shingo Tatsumi PMCID: PMC1950569 Distinguishing Functional Amino Acid Covariation from Background Linkage Disequilibrium in HIV Protease and Reverse Transcriptase Qi Wang and Christopher Lee PMCID: PMC1950573 Locus-Specific Ribosomal RNA Gene Silencing in Nucleolar Dominance Michelle S. Lewis, Diane J. Pikaard, Mikhail Nasrallah, Jed H. Doelling, and Craig S. Pikaard PMCID: PMC1950575 A Sensitive Tg Assay or rhTSH Stimulated Tg: What's the Best in the Long-Term Follow-Up of Patients with Differentiated Thyroid Carcinoma? Adrienne C.M. Persoon, Pieter L. Jager, Wim J. Sluiter, John T.M. Plukker, Bruce H.R. Wolffenbuttel, and Thera P. Links PMCID: PMC1950687 |
