| | Other Issues: previous | next | latest | archiveResearch Articles Neural Substrate of Cold-Seeking Behavior in Endotoxin Shock Maria C Almeida, Alexandre A Steiner, Luiz G S Branco, and Andrej A Romanovsky PMCID: PMC1762328 Allometric Scaling of the Active Hematopoietic Stem Cell Pool across Mammals David Dingli and Jorge M. Pacheco PMCID: PMC1762381 Invasion and Persistence of a Selfish Gene in the Cnidaria Matthew R. Goddard, Jessica Leigh, Andrew J Roger, and Andrew J Pemberton PMCID: PMC1762336 Expression of Transgenes Targeted to the Gt(ROSA)26Sor Locus Is Orientation Dependent Douglas Strathdee, Helen Ibbotson, and Seth G. N. Grant PMCID: PMC1762389 Concentration of the Most-Cited Papers in the Scientific Literature: Analysis of Journal Ecosystems John P. A. Ioannidis PMCID: PMC1762344 Establishing Clonal Cell Lines with Endothelial-Like Potential from CD9hi, SSEA-1− Cells in Embryonic Stem Cell-Derived Embryoid Bodies Qizhou Lian, KengSuan Yeo, Jianwen Que, EileenKhiaWay Tan, Fenggang Yu, Yijun Yin, Manuel Salto-Tellez, Reida Menshawe El Oakley, and Sai-Kiang Lim PMCID: PMC1762397 A Single Basis for Developmental Buffering of Drosophila Wing Shape Casper J Breuker, James S Patterson, and Christian Peter Klingenberg PMCID: PMC1762351 Molecular Adaptation during Adaptive Radiation in the Hawaiian Endemic Genus Schiedea Maxim V. Kapralov and Dmitry A. Filatov PMCID: PMC1762304 Wnt, Hedgehog and Junctional Armadillo/β-Catenin Establish Planar Polarity in the Drosophila Embryo Pamela F. Colosimo and Nicholas S. Tolwinski PMCID: PMC1762359 Differences between Belgian and Brazilian Group A Streptococcus Epidemiologic Landscape Pierre Robert Smeesters, Anne Vergison, Dioclécio Campos, Eurico de Aguiar, Veronique Yvette Miendje Deyi, and Laurence Van Melderen PMCID: PMC1762354 A Comparative Study on the Cost of New Antibiotics and Drugs of Other Therapeutic Categories Matthew E. Falagas, Konstantinos N. Fragoulis, and Ioannis Karydis PMCID: PMC1762307 The Effectiveness of Contact Tracing in Emerging Epidemics Don Klinkenberg, Christophe Fraser, and Hans Heesterbeek PMCID: PMC1762362 Short and Long-Term Effects of hVEGF-A165 in Cre-Activated Transgenic Mice Pia Leppänen, Ivana Kholová, Anssi J. Mähönen, Kari Airenne, Suvi Koota, Hannu Mansukoski, Johanna Närväinen, Maria Wirzenius, Leena Alhonen, Juhani Jänne, Kari Alitalo, and Seppo Ylä-Herttuala PMCID: PMC1762316 Cognitive Aging in Zebrafish Lili Yu, Valter Tucci, Shuji Kishi, and Irina V. Zhdanova PMCID: PMC1762370 E-Cadherin-Coated Plates Maintain Pluripotent ES Cells without Colony Formation Masato Nagaoka, Uichi Koshimizu, Shinsuke Yuasa, Fumiyuki Hattori, Hao Chen, Tomofumi Tanaka, Masaru Okabe, Keiichi Fukuda, and Toshihiro Akaike PMCID: PMC1762325 Requirement of TORC1 for Late-Phase Long-Term Potentiation in the Hippocampus Yang Zhou, Hao Wu, Shuai Li, Qian Chen, Xue-Wen Cheng, Jing Zheng, Hiroshi Takemori, and Zhi-Qi Xiong PMCID: PMC1762377 Multilocus Sequence Typing Breathes Life into a Microbial Metagenome Eshwar Mahenthiralingam, Adam Baldwin, Pavel Drevinek, Elke Vanlaere, Peter Vandamme, John J. LiPuma, and Chris G. Dowson PMCID: PMC1762331 Molecular Pathogenesis and Therapy of Polycythemia Induced in Mice by JAK2 V617F Virginia M. Zaleskas, Daniela S. Krause, Katherine Lazarides, Nihal Patel, Yiguo Hu, Shaoguang Li, and Richard A. Van Etten PMCID: PMC1762384 Clues to Neuro-Degeneration in Niemann-Pick Type C Disease from Global Gene Expression Profiling Jonathan V. Reddy, Ian G. Ganley, and Suzanne R. Pfeffer PMCID: PMC1762405 Societal Learning in Epidemics: Intervention Effectiveness during the 2003 SARS Outbreak in Singapore John M. Drake, Suok Kai Chew, and Stefan Ma PMCID: PMC1762333 Isolation of Non-Tuberculous Mycobacteria in Children Investigated for Pulmonary Tuberculosis Mark Hatherill, Tony Hawkridge, Andrew Whitelaw, Michele Tameris, Hassan Mahomed, Sizulu Moyo, Willem Hanekom, and Gregory Hussey PMCID: PMC1762386 Genetic Influences on Exercise Participation in 37.051 Twin Pairs from Seven Countries Janine H. Stubbe, Dorret I. Boomsma, Jacqueline M. Vink, Belinda K. Cornes, Nicholas G. Martin, Axel Skytthe, Kirsten O. Kyvik, Richard J. Rose, Urho M. Kujala, Jaakko Kaprio, Jennifer R. Harris, Nancy L. Pedersen, Janice Hunkin, Tim D. Spector, and Eco J.C. de Geus PMCID: PMC1762341 Development of a Tumor-Selective Approach to Treat Metastatic Cancer Karen S. Aboody, Rebecca A. Bush, Elizabeth Garcia, Marianne Z. Metz, Joseph Najbauer, Kristine A. Justus, Doris A. Phelps, Joanna S. Remack, Karina Jin Yoon, Shanna Gillespie, Seung U. Kim, Carlotta A. Glackin, Philip M. Potter, and Mary K. Danks PMCID: PMC1762394 Long-Term Persistence of Robust Antibody and Cytotoxic T Cell Responses in Recovered Patients Infected with SARS Coronavirus Taisheng Li, Jing Xie, Yuxian He, Hongwei Fan, Laurence Baril, Zhifeng Qiu, Yang Han, Wenbing Xu, Weihong Zhang, Hui You, Yanling Zuo, Qing Fang, Jian Yu, Zhiwei Chen, and Linqi Zhang PMCID: PMC1762349 The Release of Nitric Oxide from S-Nitrosothiols Promotes Angiogenesis Bahjat Al-Ani, Peter W. Hewett, Suborna Ahmed, Melissa Cudmore, Takeshi Fujisawa, Shakil Ahmad, and Asif Ahmed PMCID: PMC1762402 Dissecting Oct3/4-Regulated Gene Networks in Embryonic Stem Cells by Expression Profiling Ryo Matoba, Hitoshi Niwa, Shinji Masui, Satoshi Ohtsuka, Mark G. Carter, Alexei A. Sharov, and Minoru S.H. Ko PMCID: PMC1762406 Spatial Control of Rabies on Heterogeneous Landscapes Colin A. Russell, Leslie A. Real, and David L. Smith PMCID: PMC1762310 Perceptual Learning of Motion Leads to Faster Flicker Perception Aaron R. Seitz, Jose E. Nanez, Sr., Steve R. Holloway, and Takeo Watanabe PMCID: PMC1762365 Critical Role of Methylglyoxal and AGE in Mycobacteria-Induced Macrophage Apoptosis and Activation Helmy Rachman, Nayoung Kim, Timo Ulrichs, Sven Baumann, Lydia Pradl, Ali Nasser Eddine, Matthias Bild, Marion Rother, Ralf-Jürgen Kuban, Jong Seok Lee, Robert Hurwitz, Volker Brinkmann, George A. Kosmiadi, and Stefan H.E. Kaufmann PMCID: PMC1762319 Triose Phosphate Isomerase Deficiency Is Caused by Altered Dimerization–Not Catalytic Inactivity–of the Mutant Enzymes Markus Ralser, Gino Heeren, Michael Breitenbach, Hans Lehrach, and Sylvia Krobitsch PMCID: PMC1762313 Human Resistin Is a Systemic Immune-Derived Proinflammatory Cytokine Targeting both Leukocytes and Adipocytes Ivan Nagaev, Maria Bokarewa, Andrej Tarkowski, and Ulf Smith PMCID: PMC1762367 A Mouse Stromal Response to Tumor Invasion Predicts Prostate and Breast Cancer Patient Survival Marina Bacac, Paolo Provero, Nathalie Mayran, Jean-Christophe Stehle, Carlo Fusco, and Ivan Stamenkovic PMCID: PMC1762322 A Weakened Transcriptional Enhancer Yields Variegated Gene Expression Cathy Collins, Peter Azmi, Maribel Berru, Xiaofu Zhu, and Marc J. Shulman PMCID: PMC1762374 Electrochemically Generated Acid and Its Containment to 100 Micron Reaction Areas for the Production of DNA Microarrays Karl Maurer, John Cooper, Marcelo Caraballo, James Crye, Dominic Suciu, Andrey Ghindilis, Joseph A. Leonetti, Wei Wang, Francis M. Rossi, Axel G. Stöver, Christopher Larson, Hetian Gao, Kilian Dill, and Andy McShea PMCID: PMC1762329 Restructuring of Pancreatic Islets and Insulin Secretion in a Postnatal Critical Window Cristina Aguayo-Mazzucato, Carmen Sanchez-Soto, Victoria Godinez-Puig, Gabriel Gutiérrez-Ospina, and Marcia Hiriart PMCID: PMC1762382 Use of Confocal Laser as Light Source Reveals Stomata-Autonomous Function Roberto C. Cañamero, Hernán Boccalandro, Jorge Casal, and Laura Serna PMCID: PMC1762337 Ribosomal Protein Gene Knockdown Causes Developmental Defects in Zebrafish Tamayo Uechi, Yukari Nakajima, Akihiro Nakao, Hidetsugu Torihara, Anirban Chakraborty, Kunio Inoue, and Naoya Kenmochi PMCID: PMC1762390 Efficient Non-Viral Ocular Gene Transfer with Compacted DNA Nanoparticles Rafal Farjo, Jeff Skaggs, Alexander B. Quiambao, Mark J. Cooper, and Muna I. Naash PMCID: PMC1762345 A Virtual Reprise of the Stanley Milgram Obedience Experiments Mel Slater, Angus Antley, Adam Davison, David Swapp, Christoph Guger, Chris Barker, Nancy Pistrang, and Maria V. Sanchez-Vives PMCID: PMC1762398 Mapping the Antigenicity of the Parasites in Leishmania donovani Infection by Proteome Serology Michael Forgber, Rajatava Basu, Kaushik Roychoudhury, Stephan Theinert, Syamal Roy, Shyam Sundar, and Peter Walden PMCID: PMC1762392 Association and Host Selectivity in Multi-Host Pathogens José M. Malpica, Soledad Sacristán, Aurora Fraile, and Fernando García-Arenal PMCID: PMC1762347 A Uniform Genomic Minor Histocompatibility Antigen Typing Methodology and Database Designed to Facilitate Clinical Applications Eric Spierings, Jos Drabbels, Matthijs Hendriks, Jos Pool, Marijke Spruyt-Gerritse, Frans Claas, and Els Goulmy PMCID: PMC1762400 Is Adipose Tissue a Place for Mycobacterium tuberculosis Persistence? Olivier Neyrolles, Rogelio Hernández-Pando, France Pietri-Rouxel, Paul Fornès, Ludovic Tailleux, Jorge Alberto Barrios Payán, Elisabeth Pivert, Yann Bordat, Diane Aguilar, Marie-Christine Prévost, Caroline Petit, and Brigitte Gicquel PMCID: PMC1762355 A New Family of Giardial Cysteine-Rich Non-VSP Protein Genes and a Novel Cyst Protein Barbara J. Davids, David S. Reiner, Shanda R. Birkeland, Sarah P. Preheim, Michael J. Cipriano, Andrew G. McArthur, and Frances D. Gillin PMCID: PMC1762436 Predator Mimicry: Metalmark Moths Mimic Their Jumping Spider Predators Jadranka Rota and David L. Wagner PMCID: PMC1762363 Fine Tuning of Globin Gene Expression by DNA Methylation Alon Goren, Giora Simchen, Eitan Fibach, Piroska E. Szabo, Keiji Tanimoto, Lyubomira Chakalova, Gerd P. Pfeifer, Peter J. Fraser, James D. Engel, and Howard Cedar PMCID: PMC1762317 Cdx4 and Menin Co-Regulate Hoxa9 Expression in Hematopoietic Cells Jizhou Yan, Ya-Xiong Chen, Angela Desmond, Albert Silva, Yuqing Yang, Haoren Wang, and Xianxin Hua PMCID: PMC1762371 Does FXIII Deficiency Impair Wound Healing after Myocardial Infarction? Matthias Nahrendorf, Ralph Weissleder, and Georg Ertl PMCID: PMC1762326 Adaptive Response of a Gene Network to Environmental Changes by Fitness-Induced Attractor Selection Akiko Kashiwagi, Itaru Urabe, Kunihiko Kaneko, and Tetsuya Yomo PMCID: PMC1762378 Human Natural Killer T Cells Are Heterogeneous in Their Capacity to Reprogram Their Effector Functions Karla A. Eger, Mark S. Sundrud, Alison A. Motsinger, Michelle Tseng, Luc Van Kaer, and Derya Unutmaz PMCID: PMC1762372 Physiological Mouse Brain Aβ Levels Are Not Related to the Phosphorylation State of Threonine-668 of Alzheimer's APP Yoshitake Sano, Tadashi Nakaya, Steve Pedrini, Shizu Takeda, Kanae Iijima-Ando, Koichi Iijima, Paul M. Mathews, Shigeyoshi Itohara, Sam Gandy, and Toshiharu Suzuki PMCID: PMC1762327 Impact of Neuroprotection on Incidence of Alzheimer's Disease Raúl de la Fuente-Fernández PMCID: PMC1762379 PIASγ Is Required for Faithful Chromosome Segregation in Human Cells Laura A. Díaz-Martínez, Juan F. Giménez-Abián, Yoshiaki Azuma, Vincent Guacci, Gonzalo Giménez-Martín, Lorene M. Lanier, and Duncan J. Clarke PMCID: PMC1762334 The Dark Side of EGFP: Defective Polyubiquitination Mathijs Baens, Heidi Noels, Vicky Broeckx, Sofie Hagens, Sabine Fevery, An D. Billiau, Hugo Vankelecom, and Peter Marynen PMCID: PMC1762387 Monitoring the T-Cell Receptor Repertoire at Single-Clone Resolution Hendrik P.J. Bonarius, Frank Baas, Ester B.M. Remmerswaal, René A.W. van Lier, Ineke J.M. ten Berge, Paul P. Tak, and Niek de Vries PMCID: PMC1762342 A Low Protein Diet Increases the Hypoxic Tolerance in Drosophila Paul Vigne and Christian Frelin PMCID: PMC1762395 Genes from Chagas Susceptibility Loci That Are Differentially Expressed in T. cruzi-Resistant Mice Are Candidates Accounting for Impaired Immunity Sebastian E. B. Graefe, Thomas Streichert, Birgit S. Budde, Peter Nürnberg, Christiane Steeg, Bertram Müller-Myhsok, and Bernhard Fleischer PMCID: PMC1762350 Novel Acetylcholinesterase Target Site for Malaria Mosquito Control Yuan-Ping Pang PMCID: PMC1762403 Taxonomic Reliability of DNA Sequences in Public Sequence Databases: A Fungal Perspective R. Henrik Nilsson, Martin Ryberg, Erik Kristiansson, Kessy Abarenkov, Karl-Henrik Larsson, and Urmas Kõljalg PMCID: PMC1762357 A Large Specific Deterrent Effect of Arrest for Patronizing a Prostitute Devon D. Brewer, John J. Potterat, Stephen Q. Muth, and John M. Roberts, Jr PMCID: PMC1762352 Self-Correcting Maps of Molecular Pathways Andrey Rzhetsky, Tian Zheng, and Chani Weinreb PMCID: PMC1762305 Sexual Selection and the Evolution of Brain Size in Primates Michael A. Schillaci PMCID: PMC1762360 Depauperate Avifauna in Plantations Compared to Forests and Exurban Areas David G. Haskell, Jonathan P. Evans, and Neil W. Pelkey PMCID: PMC1762314 Polymorphism in the MHC2TA Gene Is Associated with Features of the Metabolic Syndrome and Cardiovascular Mortality Eero Lindholm, Olle Melander, Peter Almgren, Göran Berglund, Carl-David Agardh, Leif Groop, and Marju Orho-Melander PMCID: PMC1762368 Running Speed in Mammals Increases with Muscle n-6 Polyunsaturated Fatty Acid Content Thomas Ruf, Teresa Valencak, Frieda Tataruch, and Walter Arnold PMCID: PMC1762323 The PDZ Protein Canoe/AF-6 Links Ras-MAPK, Notch and Wingless/Wnt Signaling Pathways by Directly Interacting with Ras, Notch and Dishevelled Ana Carmena, Stephan Speicher, and Mary Baylies PMCID: PMC1762375 ‘Fractional Recovery’ Analysis of a Presynaptic Synaptotagmin 1-Anchored Endocytic Protein Complex Rajesh Khanna, Qi Li, and Elise F. Stanley PMCID: PMC1762330 Surprisingly High Specificity of the PPD Skin Test for M. tuberculosis Infection from Recent Exposure in The Gambia Philip C. Hill, Roger H. Brookes, Annette Fox, Dolly Jackson-Sillah, Moses D. Lugos, David J. Jeffries, Simon A. Donkor, Richard A. Adegbola, and Keith P. W. J. McAdam PMCID: PMC1762383 Neurovirulent Vaccine-Derived Polioviruses in Sewage from Highly Immune Populations Lester M. Shulman, Yossi Manor, Danit Sofer, Rachel Handsher, Tiberio Swartz, Francis Delpeyroux, and Ella Mendelson PMCID: PMC1762338 Catalases Are NAD(P)H-Dependent Tellurite Reductases Iván L. Calderón, Felipe A. Arenas, José Manuel Pérez, Derie E. Fuentes, Manuel A. Araya, Claudia P. Saavedra, Juan C. Tantaleán, Sergio E. Pichuantes, Philip A. Youderian, and Claudio C. Vásquez PMCID: PMC1762332 Prion Protein in Milk Nicola Franscini, Ahmed El Gedaily, Ulrich Matthey, Susanne Franitza, Man-Sun Sy, Alexander Bürkle, Martin Groschup, Ueli Braun, and Ralph Zahn PMCID: PMC1762385 Selection for Heterozygosity Gives Hope to a Wild Population of Inbred Wolves Staffan Bensch, Henrik Andrén, Bengt Hansson, Hans Chr. Pedersen, Håkan Sand, Douglas Sejberg, Petter Wabakken, Mikael Åkesson, and Olof Liberg PMCID: PMC1762340 The Syntax and Meaning of Wild Gibbon Songs Esther Clarke, Ulrich H. Reichard, and Klaus Zuberbühler PMCID: PMC1762393 Late Cretaceous Vicariance in Gondwanan Amphibians Ines Van Bocxlaer, Kim Roelants, S.D. Biju, J. Nagaraju, and Franky Bossuyt PMCID: PMC1762348 Control of Canalization and Evolvability by Hsp90 Claire C. Milton, Christina M. Ulane, and Suzannah Rutherford PMCID: PMC1762401 Modularity and Intrinsic Evolvability of Hsp90-Buffered Change Charles C. Carey, Kristen F. Gorman, and Suzannah Rutherford PMCID: PMC1762356 GATA Transcription Factor Required for Immunity to Bacterial and Fungal Pathogens Samantha Kerry, Michael TeKippe, Nathan C. Gaddis, and Alejandro Aballay PMCID: PMC1762309 Non-Neutral Vegetation Dynamics Marco Marani, Tommaso Zillio, Enrica Belluco, Sonia Silvestri, and Amos Maritan PMCID: PMC1762364 Mesenchymal Stem Cell-Mediated Functional Tooth Regeneration in Swine Wataru Sonoyama, Yi Liu, Dianji Fang, Takayoshi Yamaza, Byoung-Moo Seo, Chunmei Zhang, He Liu, Stan Gronthos, Cun-Yu Wang, Songtao Shi, and Songlin Wang PMCID: PMC1762318 Cross Species Association Examination of UCN3 and CRHR2 as Potential Pharmacological Targets for Antiobesity Drugs Zhihua Jiang, Jennifer J. Michal, Galen A. Williams, Tyler F. Daniels, and Tanja Kunej PMCID: PMC1762311 Multiplexed SNP Typing of Ancient DNA Clarifies the Origin of Andaman mtDNA Haplogroups amongst South Asian Tribal Populations Phillip Endicott, Mait Metspalu, Chris Stringer, Vincent Macaulay, Alan Cooper, and Juan J. Sanchez PMCID: PMC1766372 Separation of Anti-Proliferation and Anti-Apoptotic Functions of Retinoblastoma Protein through Targeted Mutations of Its A/B Domain B. Nelson Chau, Chris W. Pan, and Jean Y.J. Wang PMCID: PMC1762320 Hyperhomocysteinemia and Mortality after Coronary Artery Bypass Grafting Domenico Girelli, Nicola Martinelli, Oliviero Olivieri, Francesca Pizzolo, Simonetta Friso, Giovanni Faccini, Claudia Bozzini, Ilaria Tenuti, Valentina Lotto, Giuliano Villa, Patrizia Guarini, Elisabetta Trabetti, Pier Franco Pignatti, Alessandro Mazzucco, and Roberto Corrocher PMCID: PMC1762373 The Evolution of Mammalian Gene Families Jeffery P. Demuth, Tijl De Bie, Jason E. Stajich, Nello Cristianini, and Matthew W. Hahn PMCID: PMC1762380 Error Processing in Huntington's Disease Christian Beste, Carsten Saft, Jürgen Andrich, Ralf Gold, and Michael Falkenstein PMCID: PMC1762335 Modulation of T Cell Function by Combination of Epitope Specific and Low Dose Anticytokine Therapy Controls Autoimmune Arthritis Sarah T.A. Roord, Evelien Zonneveld-Huijssoon, Tho Le, Gisella Puga Yung, Eva Koffeman, Arash Ronaghy, Negar Ghahramani, Paola Lanza, Rosario Billetta, Berent J. Prakken, and Salvatore Albani PMCID: PMC1762388 Probe Selection and Expression Index Computation of Affymetrix Exon Arrays Yi Xing, Karen Kapur, and Wing Hung Wong PMCID: PMC1762343 Clinical Outcome of HIV-Infected Patients with Sustained Virologic Response to Antiretroviral Therapy: Long-Term Follow-Up of a Multicenter Cohort Félix Gutierrez, Sergio Padilla, Mar Masiá, José A. Iribarren, Santiago Moreno, Pompeyo Viciana, Leopoldo Muñoz, José L. Gómez Sirvent, Francesc Vidal, José López-Aldeguer, José R. Blanco, Manuel Leal, María Angeles Rodríguez-Arenas, and Santiago Perez Hoyos PMCID: PMC1762396 Age-Related Attenuation of Dominant Hand Superiority Tobias Kalisch, Claudia Wilimzig, Nadine Kleibel, Martin Tegenthoff, and Hubert R. Dinse PMCID: PMC1762407 Human Coronary Artery Remodeling, Beginning and End of the Atherosclerotic Process Paul de Groot and R.W. Veldhuizen PMCID: PMC1762346 Regulated Polyploidy in Halophilic Archaea Sebastian Breuert, Thorsten Allers, Gabi Spohn, and Jörg Soppa PMCID: PMC1762399 Wnt and Hedgehog Are Critical Mediators of Cigarette Smoke-Induced Lung Cancer Hassan Lemjabbar-Alaoui, Vijay Dasari, Sukhvinder S. Sidhu, Aklilu Mengistab, Walter Finkbeiner, Marianne Gallup, and Carol Basbaum PMCID: PMC1762353 A Bayesian Network Driven Approach to Model the Transcriptional Response to Nitric Oxide in Saccharomyces cerevisiae Jingchun Zhu, Ashwini Jambhekar, Aaron Sarver, and Joseph DeRisi PMCID: PMC1762306 Rapid and Highly Informative Diagnostic Assay for H5N1 Influenza Viruses Nader Pourmand, Lisa Diamond, Rebecca Garten, Julianna P. Erickson, Jochen Kumm, Ruben O. Donis, and Ronald W. Davis PMCID: PMC1762361 Experimental Rugged Fitness Landscape in Protein Sequence Space Yuuki Hayashi, Takuyo Aita, Hitoshi Toyota, Yuzuru Husimi, Itaru Urabe, and Tetsuya Yomo PMCID: PMC1762315 A Systems Biology Strategy Reveals Biological Pathways and Plasma Biomarker Candidates for Potentially Toxic Statin-Induced Changes in Muscle Reijo Laaksonen, Mikko Katajamaa, Hannu Päivä, Marko Sysi-Aho, Lilli Saarinen, Päivi Junni, Dieter Lütjohann, Joél Smet, Rudy Van Coster, Tuulikki Seppänen-Laakso, Terho Lehtimäki, Juhani Soini, and Matej Orešič PMCID: PMC1762369 A Proof-Of-Principle Study of Epigenetic Therapy Added to Neoadjuvant Doxorubicin Cyclophosphamide for Locally Advanced Breast Cancer Claudia Arce, Carlos Pérez-Plasencia, Aurora González-Fierro, Erick de la Cruz-Hernández, Alma Revilla-Vázquez, Alma Chávez-Blanco, Catalina Trejo-Becerril, Enrique Pérez-Cárdenas, Lucia Taja-Chayeb, Enrique Bargallo, Patricia Villarreal, Teresa Ramírez, Teresa Vela, Myrna Candelaria, Maria F. Camargo, Elizabeth Robles, and Alfonso Dueñas-González PMCID: PMC1762324 Divalent Metal Ion Coordination by Residue T118 of Anthrax Toxin Receptor 2 Is Not Essential for Protective Antigen Binding Heather M. Scobie and John A.T. Young PMCID: PMC1762376 Factors Affecting Frequency Discrimination of Vibrotactile Stimuli: Implications for Cortical Encoding Justin A. Harris, Ehsan Arabzadeh, Adrienne L. Fairhall, Claire Benito, and Mathew E. Diamond PMCID: PMC1762303 Vaccinia Scars Associated with Improved Survival among Adults in Rural Guinea-Bissau Mette Lundsby Jensen, Sangeeta Dave, Maarten Schim van der Loeff, Carlos da Costa, Tim Vincent, Aleksandra Leligdowicz, Christine Stabell Benn, Adam Roth, Henrik Ravn, Ida Maria Lisse, Hilton Whittle, and Peter Aaby PMCID: PMC1762358 Strong HIV-1-Specific T Cell Responses in HIV-1-Exposed Uninfected Infants and Neonates Revealed after Regulatory T Cell Removal Fatema A. Legrand, Douglas F. Nixon, Christopher P. Loo, Erika Ono, Joan M. Chapman, Maristela Miyamoto, Ricardo S. Diaz, Amélia M.N. Santos, Regina C.M. Succi, Jacob Abadi, Michael G. Rosenberg, Maria Isabel de Moraes-Pinto, and Esper G. Kallas PMCID: PMC1762312 Policy Adjustment in a Dynamic Economic Game Jian Li, Samuel M. McClure, Brooks King-Casas, and P. Read Montague PMCID: PMC1762366 Genome-Wide Reverse Genetics Framework to Identify Novel Functions of the Vertebrate Secretome Michael A. Pickart, Eric W. Klee, Aubrey L. Nielsen, Sridhar Sivasubbu, Eric M. Mendenhall, Brent R. Bill, Eleanor Chen, Craig E. Eckfeldt, Michelle Knowlton, Mara E. Robu, Jon D. Larson, Yun Deng, Lisa A. Schimmenti, Lynda B.M. Ellis, Catherine M. Verfaillie, Matthias Hammerschmidt, Steven A. Farber, and Stephen C. Ekker PMCID: PMC1766371 Genetics of Local Adaptation in the Laboratory: Flowering Time Quantitative Trait Loci under Geographic and Seasonal Conditions in Arabidopsis Yan Li, Peter Roycewicz, Evadne Smith, and Justin O. Borevitz PMCID: PMC1762425 An NF-κB and Slug Regulatory Loop Active in Early Vertebrate Mesoderm Chi Zhang, Timothy F. Carl, Evan D. Trudeau, Thomas Simmet, and Michael W. Klymkowsky PMCID: PMC1762408 Biogenesis and Dynamics of Mitochondria during the Cell Cycle: Significance of 3′UTRs Marta Martínez-Diez, Gema Santamaría, Álvaro D. Ortega, and José M. Cuezva PMCID: PMC1762426 Soluble TNF Mediates the Transition from Pulmonary Inflammation to Fibrosis Nikos Oikonomou, Vaggelis Harokopos, Jonathan Zalevsky, Christos Valavanis, Anastasia Kotanidou, David E. Szymkowski, George Kollias, and Vassilis Aidinis PMCID: PMC1762410 To Have or Not To Have a Pet for Better Health? Leena K. Koivusilta and Ansa Ojanlatva PMCID: PMC1762431 Unusually Long Palindromes Are Abundant in Mitochondrial Control Regions of Insects and Nematodes K. P. Arunkumar and Javaregowda Nagaraju PMCID: PMC1762429 The Interplay between PolyQ and Protein Context Delays Aggregation by Forming a Reservoir of Protofibrils Donatella Bulone, Laura Masino, David J. Thomas, Pier Luigi San Biagio, and Annalisa Pastore PMCID: PMC1762411 Increased Nucleotide Diversity with Transient Y Linkage in Drosophila americana Bryant F. McAllister and Amy L. Evans PMCID: PMC1762432 Towards Alignment Independent Quantitative Assessment of Homology Detection Avihay Apatoff, Eddo Kim, and Yossef Kliger PMCID: PMC1762415 Transcriptional Changes Common to Human Cocaine, Cannabis and Phencyclidine Abuse Elin Lehrmann, Carlo Colantuoni, Amy Deep-Soboslay, Kevin G. Becker, Ross Lowe, Marilyn A. Huestis, Thomas M. Hyde, Joel E. Kleinman, and William J. Freed PMCID: PMC1762434 Detection of Conjugation Related Type Four Secretion Machinery in Aeromonas culicicola Ashraf Yusuf Rangrez, Kannayakanahalli Maheshwarappa Dayananda, Santosh Atanur, Rajendra Joshi, Milind S. Patole, and Yogesh S. Shouche PMCID: PMC1762418 MiRNA-Directed Regulation of VEGF and Other Angiogenic Factors under Hypoxia Zhong Hua, Qing Lv, Wenbin Ye, Chung-Kwun Amy Wong, Guoping Cai, Dayong Gu, Yanhong Ji, Chen Zhao, Jifeng Wang, Burton B. Yang, and Yaou Zhang PMCID: PMC1762435 Catechol-O-Methyltransferase Gene Polymorphism Modifies the Effect of Coffee Intake on Incidence of Acute Coronary Events Pertti Happonen, Sari Voutilainen, Tomi-Pekka Tuomainen, and Jukka T. Salonen PMCID: PMC1762420 Swordtail Fry Attend to Chemical and Visual Cues in Detecting Predators and Conspecifics Seth W. Coleman and Gil G. Rosenthal PMCID: PMC1762321 Designer Self-Assembling Peptide Nanofiber Scaffolds for Adult Mouse Neural Stem Cell 3-Dimensional Cultures Fabrizio Gelain, Daniele Bottai, Angleo Vescovi, and Shuguang Zhang PMCID: PMC1762423 Cooperation between Engulfment Receptors: The Case of ABCA1 and MEGF10 Yannick Hamon, Doriane Trompier, Zhong Ma, Victor Venegas, Matthieu Pophillat, Vincent Mignotte, Zheng Zhou, and Giovanna Chimini PMCID: PMC1762421 Acceptance of Anti-Retroviral Therapy among Patients Infected with HIV and Tuberculosis in Rural Malawi Is Low and Associated with Cost of Transport Rony Zachariah, Anthony David Harries, Marcel Manzi, Patrick Gomani, Roger Teck, Mit Phillips, and Peter Firmenich PMCID: PMC1762339 Shaping Leg Muscles in Drosophila: Role of ladybird, a Conserved Regulator of Appendicular Myogenesis Tariq Maqbool, Cedric Soler, Teresa Jagla, Malgorzata Daczewska, Neha Lodha, Sudhir Palliyil, K. VijayRaghavan, and Krzysztof Jagla PMCID: PMC1762424 Natural Variation in Partial Resistance to Pseudomonas syringae Is Controlled by Two Major QTLs in Arabidopsis thaliana Laure Perchepied, Thomas Kroj, Maurice Tronchet, Olivier Loudet, and Dominique Roby PMCID: PMC1762404 IL-7 Up-Regulates TNF-α-Dependent Osteoclastogenesis in Patients Affected by Solid Tumor Ilaria Roato, Giacomina Brunetti, Eva Gorassini, Maria Grano, Silvia Colucci, Lisa Bonello, Lucio Buffoni, Roberto Manfredi, Enrico Ruffini, Davide Ottaviani, Libero Ciuffreda, Antonio Mussa, and Riccardo Ferracini PMCID: PMC1762428 Heterozygote Advantage for Fecundity Neil J. Gemmell and Jon Slate PMCID: PMC1762409 Docking of Secretory Vesicles Is Syntaxin Dependent Heidi de Wit, L. Niels Cornelisse, Ruud F.G. Toonen, and Matthijs Verhage PMCID: PMC1762430 Gender Differences in Publication Output: Towards an Unbiased Metric of Research Performance Matthew R.E. Symonds, Neil J. Gemmell, Tamsin L. Braisher, Kylie L. Gorringe, and Mark A. Elgar PMCID: PMC1762413 A Critical Role for FBXW8 and MAPK in Cyclin D1 Degradation and Cancer Cell Proliferation Hiroshi Okabe, Sang-Hyun Lee, Janyaporn Phuchareon, Donna G. Albertson, Frank McCormick, and Osamu Tetsu PMCID: PMC1762433 CD4+CD25+FOXP3+ Regulatory T Cells Suppress Anti-Tumor Immune Responses in Patients with Colorectal Cancer Sarah L. Clarke, Gareth J. Betts, Andrea Plant, Kate L. Wright, Tariq M. El-Shanawany, Richard Harrop, Jared Torkington, Brian I. Rees, Geraint T. Williams, Awen M. Gallimore, and Andrew J. Godkin PMCID: PMC1762416 Comparative Toxicity of Fumigants and a Phosphine Synergist Using a Novel Containment Chamber for the Safe Generation of Concentrated Phosphine Gas Nicholas Valmas and Paul R. Ebert PMCID: PMC1762414 Rho Kinase's Role in Myosin Recruitment to the Equatorial Cortex of Mitotic Drosophila S2 Cells Is for Myosin Regulatory Light Chain Phosphorylation Sara O. Dean and James A. Spudich PMCID: PMC1762308 A Predator from East Africa that Chooses Malaria Vectors as Preferred Prey Ximena J. Nelson and Robert R. Jackson PMCID: PMC1762417 The Sound Generated by Mid-Ocean Ridge Black Smoker Hydrothermal Vents Timothy J. Crone, William S.D. Wilcock, Andrew H. Barclay, and Jeffrey D. Parsons PMCID: PMC1762412 Maf1, a New Player in the Regulation of Human RNA Polymerase III Transcription Jaime H. Reina, Teldja N. Azzouz, and Nouria Hernandez PMCID: PMC1762419 DNA Encoding an HIV-1 Gag/Human Lysosome-Associated Membrane Protein-1 Chimera Elicits a Broad Cellular and Humoral Immune Response in Rhesus Macaques Priya Chikhlikar, Luciana Barros de Arruda, Milton Maciel, Peter Silvera, Mark G. Lewis, J. Thomas August, and Ernesto T.A. Marques PMCID: PMC1762437 Analysis of In-Vivo LacR-Mediated Gene Repression Based on the Mechanics of DNA Looping Yongli Zhang, Abbye E. McEwen, Donald M. Crothers, and Stephen D. Levene PMCID: PMC1762422 Stimulus Dependence of Barrel Cortex Directional Selectivity Gabriel D. Puccini, Albert Compte, and Miguel Maravall PMCID: PMC1762391 NMDA and Dopamine Converge on the NMDA-Receptor to Induce ERK Activation and Synaptic Depression in Mature Hippocampus Hanoch Kaphzan, Kenneth J. O'Riordan, Kile P. Mangan, Jonathan M. Levenson, and Kobi Rosenblum PMCID: PMC1762427 |
