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Volume 15(9);  September 2006
Articles
Configurational-bias sampling technique for predicting side-chain conformations in proteins
Tushar Jain, David S. Cerutti, and J. Andrew McCammon
Protein Sci. 2006 September; 15(9): 2029–2039. doi: 10.1110/ps.062165906.
PMCID: PMC2242598
The refolding of different α-fetoprotein variants
Susanna S.J. Leong and Anton P.J. Middelberg
Protein Sci. 2006 September; 15(9): 2040–2050. doi: 10.1110/ps.062262406.
PMCID: PMC2242608
A model for the coupling of α-helix and tertiary contact formation
Andrew C. Hausrath
Protein Sci. 2006 September; 15(9): 2051–2061. doi: 10.1110/ps.062292106.
PMCID: PMC2242607
Fundamental processes of protein folding: Measuring the energetic balance between helix formation and hydrophobic interactions
Wujing Xian, Peter J. Connolly, Marcela Oslin, Andrew C. Hausrath, and John J. Osterhout
Protein Sci. 2006 September; 15(9): 2062–2070. doi: 10.1110/ps.062297006.
PMCID: PMC2242613
Peptide deformylase is a potential target for anti-Helicobacter pylori drugs: Reverse docking, enzymatic assay, and X-ray crystallography validation
Jianhua Cai, Cong Han, Tiancen Hu, Jian Zhang, Dalei Wu, Fangdao Wang, Yunqing Liu, Jianping Ding, Kaixian Chen, Jianmin Yue, Xu Shen, and Hualiang Jiang
Protein Sci. 2006 September; 15(9): 2071–2081. doi: 10.1110/ps.062238406.
PMCID: PMC2242601
Revisiting the Voronoi description of protein–protein interfaces
Frédéric Cazals, Flavien Proust, Ranjit P. Bahadur, and Joël Janin
Protein Sci. 2006 September; 15(9): 2082–2092. doi: 10.1110/ps.062245906.
PMCID: PMC2242599
The structure of GDP-4-keto-6-deoxy-d-mannose-3-dehydratase: A unique coenzyme B6-dependent enzyme
Paul D. Cook, James B. Thoden, and Hazel M. Holden
Protein Sci. 2006 September; 15(9): 2093–2106. doi: 10.1110/ps.062328306.
PMCID: PMC2242600
Identification of an alcohol binding site in the first cysteine-rich domain of protein kinase C δ
Joydip Das, Xiaojuan Zhou, and Keith W. Miller
Protein Sci. 2006 September; 15(9): 2107–2119. doi: 10.1110/ps.062237606.
PMCID: PMC2242605
Residue centrality, functionally important residues, and active site shape: Analysis of enzyme and non-enzyme families
Antonio del Sol, Hirotomo Fujihashi, Dolors Amoros, and Ruth Nussinov
Protein Sci. 2006 September; 15(9): 2120–2128. doi: 10.1110/ps.062249106.
PMCID: PMC2242611
Two crystal structures of Trichoderma reesei hydrophobin HFBI—The structure of a protein amphiphile with and without detergent interaction
Johanna Hakanpää, Géza R. Szilvay, Heidi Kaljunen, Mirko Maksimainen, Markus Linder, and Juha Rouvinen
Protein Sci. 2006 September; 15(9): 2129–2140. doi: 10.1110/ps.062326706.
PMCID: PMC2242604
Effects of mutation at the D-JH junction on affinity, specificity, and idiotypy of anti-progesterone antibody DB3
Mingyue He, Maureen Hamon, Hong Liu, Adam L. Corper, and Michael J. Taussig
Protein Sci. 2006 September; 15(9): 2141–2148. doi: 10.1110/ps.062236806.
PMCID: PMC2242612
Solution structure of GOPC PDZ domain and its interaction with the C-terminal motif of neuroligin
Xiang Li, Jiahai Zhang, Zanxia Cao, Jihui Wu, and Yunyu Shi
Protein Sci. 2006 September; 15(9): 2149–2158. doi: 10.1110/ps.062087506.
PMCID: PMC2242614
Engineered lanthanide-binding metallohomeodomains: Designing folded chimeras by modular turn substitution
Sunghyuk Lim and Sonya J. Franklin
Protein Sci. 2006 September; 15(9): 2159–2165. doi: 10.1110/ps.062365506.
PMCID: PMC2242603
The folding mechanism of collagen-like model peptides explored through detailed molecular simulations
Collin M. Stultz
Protein Sci. 2006 September; 15(9): 2166–2177. doi: 10.1110/ps.062124606.
PMCID: PMC2242609
Comparative analysis and “expression space” coverage of the production of prokaryotic membrane proteins for structural genomics
Sachin Surade, Markus Klein, Peggy C. Stolt-Bergner, Cornelia Muenke, Ankita Roy, and Hartmut Michel
Protein Sci. 2006 September; 15(9): 2178–2189. doi: 10.1110/ps.062312706.
PMCID: PMC2242615
Model of the toxic complex of anthrax: Responsive conformational changes in both the lethal factor and the protective antigen heptamer
Florence Tama, Gang Ren, Charles L. Brooks, III, and Alok K. Mitra
Protein Sci. 2006 September; 15(9): 2190–2200. doi: 10.1110/ps.062293906.
PMCID: PMC2242606
Protein Structure Report
Crystal structure of the human TRPV2 channel ankyrin repeat domain
Clare J. McCleverty, Eric Koesema, Ardem Patapoutian, Scott A. Lesley, and Andreas Kreusch
Protein Sci. 2006 September; 15(9): 2201–2206. doi: 10.1110/ps.062357206.
PMCID: PMC2242602
For the Record
A structural rationale for SV40 Vp1 temperature-sensitive mutants and their complementation
Harumi Kasamatsu, Jennifer Woo, Akiko Nakamura, Peter Müller, M. Judith Tevethia, and Robert C. Liddington
Protein Sci. 2006 September; 15(9): 2207–2213. doi: 10.1110/ps.062195606.
PMCID: PMC2242610
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