| | This journal provides immediate access to some articles. Articles Conversion of trypsin to a functional threonine protease Teaster T. Baird, Jr, William D. Wright, and Charles S. Craik PMCID: PMC2242550 Structure of the 21–30 fragment of amyloid β-protein Andrij Baumketner, Summer L. Bernstein, Thomas Wyttenbach, Noel D. Lazo, David B. Teplow, Michael T. Bowers, and Joan-Emma Shea PMCID: PMC2265091 Solution structure of the ubiquitin-associated domain of human BMSC-UbP and its complex with ubiquitin Yong-Gang Chang, Ai-Xin Song, Yong-Guang Gao, Yan-Hong Shi, Xiao-Jing Lin, Xue-Tao Cao, Dong-Hai Lin, and Hong-Yu Hu PMCID: PMC2242545 Identification of novel quaternary domain interactions in the Hsp90 chaperone, GRP94 Feixia Chu, Jason C. Maynard, Gabriela Chiosis, Christopher V. Nicchitta, and Alma L. Burlingame PMCID: PMC2242539 Glu257 in GroEL is a sensor involved in coupling polypeptide substrate binding to stimulation of ATP hydrolysis Oded Danziger, Liat Shimon, and Amnon Horovitz PMCID: PMC2242535 Contribution of the mu loop to the structure and function of rat glutathione transferase M1-1 Jennifer L. Hearne and Roberta F. Colman PMCID: PMC2242538 Protein SRP68 of human signal recognition particle: Identification of the RNA and SRP72 binding domains Elena Iakhiaeva, Shakhawat Hossain Bhuiyan, Jiaming Yin, and Christian Zwieb PMCID: PMC2242529 Structure and dynamics of dark-state bovine rhodopsin revealed by chemical cross-linking and high-resolution mass spectrometry Richard B. Jacobsen, Kenneth L. Sale, Marites J. Ayson, Petr Novak, Joohee Hong, Pamela Lane, Nichole L. Wood, Gary H. Kruppa, Malin M. Young, and Joseph S. Schoeniger PMCID: PMC2242551 Positioning of proteins in membranes: A computational approach Andrei L. Lomize, Irina D. Pogozheva, Mikhail A. Lomize, and Henry I. Mosberg PMCID: PMC2242528 Dichotomous versus palm-type mechanisms of lateral assembly of amyloid fibrils Natallia Makarava, Olga V. Bocharova, Vadim V. Salnikov, Leonid Breydo, Maighdlin Anderson, and Ilia V. Baskakov PMCID: PMC2265092 NMR solution structure and backbone dynamics of domain III of the E protein of tick-borne Langat flavivirus suggests a potential site for molecular recognition Munia Mukherjee, Kaushik Dutta, Mark A. White, David Cowburn, and Robert O. Fox PMCID: PMC2242546 Structural basis for the enantiospecificities of R- and S-specific phenoxypropionate/α-ketoglutarate dioxygenases Tina A. Müller, Maria I. Zavodszky, Michael Feig, Leslie A. Kuhn, and Robert P. Hausinger PMCID: PMC2242530 Solution structure of HndAc: A thioredoxin-like domain involved in the NADP-reducing hydrogenase complex Matthieu Nouailler, Xavier Morelli, Olivier Bornet, Bernard Chetrit, Zorah Dermoun, and Françoise Guerlesquin PMCID: PMC2242533 Characterization of three areas of interactions stabilizing complexes between SecA and SecB, two proteins involved in protein export Chetan N. Patel, Virginia F. Smith, and Linda L. Randall PMCID: PMC2265093 Characterization of E. coli tetrameric aldehyde dehydrogenases with atypical properties compared to other aldehyde dehydrogenases José Salud Rodríguez-Zavala, Abdellah Allali-Hassani, and Henry Weiner PMCID: PMC2242541 Characterization of the unfolded state of bovine α-lactalbumin and comparison with unfolded states of homologous proteins Julia Wirmer, Holger Berk, Raffaella Ugolini, Christina Redfield, and Harald Schwalbe PMCID: PMC2242548 Structure and topology of the non-amyloid-β component fragment of human α-synuclein bound to micelles: Implications for the aggregation process Marco Bisaglia, Alessandra Trolio, Massimo Bellanda, Elisabetta Bergantino, Luigi Bubacco, and Stefano Mammi PMCID: PMC2265094 Biochemical characterization of prephenate dehydrogenase from the hyperthermophilic bacterium Aquifex aeolicus Julie Bonvin, Raphael A. Aponte, Maria Marcantonio, Sasha Singh, Dinesh Christendat, and Joanne L. Turnbull PMCID: PMC2265095 The synthesis and high-level expression of a β2-adrenergic receptor gene in a tetracycline-inducible stable mammalian cell line Prashen Chelikani, Philip J. Reeves, Uttam L. Rajbhandary, and H. Gobind Khorana PMCID: PMC2265096 Stepwise disassembly and apparent nonstepwise reassembly for the oligomeric RbsD protein Yongjun Feng, Wangwang Jiao, Xinmiao Fu, and Zengyi Chang PMCID: PMC2242537 Molecular dissection of the mycobacterial stringent response protein Rel Vikas Jain, Raspudin Saleem-Batcha, Arnab China, and Dipankar Chatterji PMCID: PMC2242531 Free energies of protein–protein association determined by electrospray ionization mass spectrometry correlate accurately with values obtained by solution methods Sanjay R. Krishnaswamy, Evan R. Williams, and Jack F. Kirsch PMCID: PMC2242526 Interpretation of the dissolution of insoluble peptide sequences based on the acid-base properties of the solvent Luciana Malavolta, Marcelo R.S. Pinto, Jamile H. Cuvero, and Clóvis R. Nakaie PMCID: PMC2242547 Protein Structure Reports The crystal structure of Mycobacterium tuberculosis adenylate kinase in complex with two molecules of ADP and Mg2+ supports an associative mechanism for phosphoryl transfer Marco Bellinzoni, Ahmed Haouz, Martin Graña, Hélène Munier-Lehmann, William Shepard, and Pedro M. Alzari PMCID: PMC2242552 Crystal structure of hypothetical protein TTHB192 from Thermus thermophilus HB8 reveals a new protein family with an RNA recognition motif-like domain Akio Ebihara, Min Yao, Ryoji Masui, Isao Tanaka, Shigeyuki Yokoyama, and Seiki Kuramitsu PMCID: PMC2242536 The crystal structure of human receptor protein tyrosine phosphatase κ phosphatase domain 1 Jeyanthy Eswaran, Judit É. Debreczeni, Emma Longman, Alastair J. Barr, and Stefan Knapp PMCID: PMC2242534 Structural characterization of GntR/HutC family signaling domain Marina Gorelik, Vladimir V. Lunin, Tatiana Skarina, and Alexei Savchenko PMCID: PMC2242532 NMR structure of the first Ig module of mouse FGFR1 Vladislav V. Kiselyov, Elisabeth Bock, Vladimir Berezin, and Flemming M. Poulsen PMCID: PMC2242543 Crystal structure of the yeast His6 enzyme suggests a reaction mechanism Sophie Quevillon-Cheruel, Nicolas Leulliot, Marc Graille, Karine Blondeau, Joel Janin, and Herman Van Tilbeurgh PMCID: PMC2242542 For the Record Modeling of possible subunit arrangements in the eukaryotic chaperonin TRiC Erik J. Miller, Anne S. Meyer, and Judith Frydman PMCID: PMC2265097 Automated Function Prediction New avenues in protein function prediction Iddo Friedberg, Martin Jambon, and Adam Godzik PMCID: PMC2242544 Recurrent use of evolutionary importance for functional annotation of proteins based on local structural similarity David M. Kristensen, Brian Y. Chen, Viacheslav Y. Fofanov, R. Matthew Ward, Andreas Martin Lisewski, Marek Kimmel, Lydia E. Kavraki, and Olivier Lichtarge PMCID: PMC2242527 Structure-based function inference using protein family-specific fingerprints Deepak Bandyopadhyay, Jun Huan, Jinze Liu, Jan Prins, Jack Snoeyink, Wei Wang, and Alexander Tropsha PMCID: PMC2265098 A categorization approach to automated ontological function annotation Karin Verspoor, Judith Cohn, Susan Mniszewski, and Cliff Joslyn PMCID: PMC2242540 Enhanced automated function prediction using distantly related sequences and contextual association by PFP Troy Hawkins, Stanislav Luban, and Daisuke Kihara PMCID: PMC2242549 Functional annotation prediction: All for one and one for all Ori Sasson, Noam Kaplan, and Michal Linial PMCID: PMC2242553 Correction Protein Sci. 2006 June; 15(6): 1563. PMCID: PMC2242525 Corrects: Alexander N. Volkov, et al. The orientations of cytochrome c in the highly dynamic complex with cytochrome b5 visualized by NMR and docking using HADDOCK. Protein Sci. 2005 March; 14(3): 799–811. |
