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Volume 3(9);  September 2007
Correspondence
Reply to “Ten Simple Rules for Getting Published”
Eric Grosch
PLoS Comput Biol. 2007 September; 3(9): e190. Published online 2007 September 28. doi: 10.1371/journal.pcbi.0030190.
PMCID: PMC1994987
Education
From Pathways Databases to Network Models of Switching Behavior
Baltazar D Aguda and Andrew B Goryachev
PLoS Comput Biol. 2007 September; 3(9): e152. Published online 2007 September 28. doi: 10.1371/journal.pcbi.0030152.
PMCID: PMC1994972
Editorial
Developing Computational Biology
Philip E Bourne and Steven E Brenner
PLoS Comput Biol. 2007 September; 3(9): e157. Published online 2007 September 28. doi: 10.1371/journal.pcbi.0030157.
PMCID: PMC1994973
Perspectives
Development of Genomic Sciences in Mexico: A Good Start and a Long Way to Go
Rafael Palacios and Julio Collado-Vides
PLoS Comput Biol. 2007 September; 3(9): e143. Published online 2007 September 28. doi: 10.1371/journal.pcbi.0030143.
PMCID: PMC1994971
Research Articles
A Balanced Memory Network
Yasser Roudi and Peter E Latham
PLoS Comput Biol. 2007 September; 3(9): e141. Prepublished online 2007 June 5. Published online 2007 September 7. doi: 10.1371/journal.pcbi.0030141.
PMCID: PMC1971123
Systems Analysis of Chaperone Networks in the Malarial Parasite Plasmodium falciparum
Soundara Raghavan Pavithra, Ranjit Kumar, and Utpal Tatu
PLoS Comput Biol. 2007 September; 3(9): e168. Published online 2007 September 14. doi: 10.1371/journal.pcbi.0030168.
PMCID: PMC1976336
Signal Propagation in Proteins and Relation to Equilibrium Fluctuations
Chakra Chennubhotla and Ivet Bahar
PLoS Comput Biol. 2007 September; 3(9): e172. Published online 2007 September 21. doi: 10.1371/journal.pcbi.0030172.
PMCID: PMC1988854
Structural Reorganisation and Potential Toxicity of Oligomeric Species Formed during the Assembly of Amyloid Fibrils
Mookyung Cheon, Iksoo Chang, Sandipan Mohanty, Leila M Luheshi, Christopher M Dobson, Michele Vendruscolo, and Giorgio Favrin
PLoS Comput Biol. 2007 September; 3(9): e173. Published online 2007 September 14. doi: 10.1371/journal.pcbi.0030173.
PMCID: PMC1976335
A Computational Approach to the Functional Screening of Genomes
Davide Chiarugi, Pierpaolo Degano, and Roberto Marangoni
PLoS Comput Biol. 2007 September; 3(9): e174. Prepublished online 2007 July 26. Published online 2007 September 28. doi: 10.1371/journal.pcbi.0030174.
PMCID: PMC1994977
Orthologous Transcription Factors in Bacteria Have Different Functions and Regulate Different Genes
Morgan N Price, Paramvir S Dehal, and Adam P Arkin
PLoS Comput Biol. 2007 September; 3(9): e175. Published online 2007 September 7. doi: 10.1371/journal.pcbi.0030175.
PMCID: PMC1971122
A Macaque's-Eye View of Human Insertions and Deletions: Differences in Mechanisms
Erika M Kvikstad, Svitlana Tyekucheva, Francesca Chiaromonte, and Kateryna D Makova
PLoS Comput Biol. 2007 September; 3(9): e176. Prepublished online 2007 July 27. Published online 2007 September 14. doi: 10.1371/journal.pcbi.0030176.
PMCID: PMC1976337
Excitability Constraints on Voltage-Gated Sodium Channels
Elaine Angelino and Michael P Brenner
PLoS Comput Biol. 2007 September; 3(9): e177. Published online 2007 September 21. doi: 10.1371/journal.pcbi.0030177.
PMCID: PMC1988852
Characterization of Protein Hubs by Inferring Interacting Motifs from Protein Interactions
Ramon Aragues, Andrej Sali, Jaume Bonet, Marc A Marti-Renom, and Baldo Oliva
PLoS Comput Biol. 2007 September; 3(9): e178. Prepublished online 2007 July 30. Published online 2007 September 14. doi: 10.1371/journal.pcbi.0030178.
PMCID: PMC1976338
What Are Lightness Illusions and Why Do We See Them?
David Corney and R. Beau Lotto
PLoS Comput Biol. 2007 September; 3(9): e180. Published online 2007 September 28. doi: 10.1371/journal.pcbi.0030180.
PMCID: PMC1994982
Organization and Evolution of Primate Centromeric DNA from Whole-Genome Shotgun Sequence Data
Can Alkan, Mario Ventura, Nicoletta Archidiacono, Mariano Rocchi, S. Cenk Sahinalp, and Evan E Eichler
PLoS Comput Biol. 2007 September; 3(9): e181. Published online 2007 September 28. doi: 10.1371/journal.pcbi.0030181.
PMCID: PMC1994983
Structure-Templated Predictions of Novel Protein Interactions from Sequence Information
Doron Betel, Kevin E Breitkreuz, Ruth Isserlin, Danielle Dewar-Darch, Mike Tyers, and Christopher W. V Hogue
PLoS Comput Biol. 2007 September; 3(9): e182. Published online 2007 September 21. doi: 10.1371/journal.pcbi.0030182.
PMCID: PMC1988853
Bistability and Oscillations in the Huang-Ferrell Model of MAPK Signaling
Liang Qiao, Robert B Nachbar, Ioannis G Kevrekidis, and Stanislav Y Shvartsman
PLoS Comput Biol. 2007 September; 3(9): e184. Prepublished online 2007 August 6. Published online 2007 September 28. doi: 10.1371/journal.pcbi.0030184.
PMCID: PMC1994985
The Origins of Specificity in Polyketide Synthase Protein Interactions
Mukund Thattai, Yoram Burak, and Boris I Shraiman
PLoS Comput Biol. 2007 September; 3(9): e186. Published online 2007 September 28. doi: 10.1371/journal.pcbi.0030186.
PMCID: PMC1994986
Correction
Correction: Adaptive, Fast Walking in a Biped Robot under Neuronal Control and Learning
Poramate Manoonpong, Tao Geng, Tomas Kulvicius, Bernd Porr, and Florentin Wörgötter
PLoS Comput Biol. 2007 September; 3(9): e191. Published online 2007 September 28. doi: 10.1371/journal.pcbi.0030191.
PMCID: PMC1994988
Corrects: Poramate Manoonpong, et al. Adaptive, Fast Walking in a Biped Robot under Neuronal Control and Learning. PLoS Comput Biol. 2007 July; 3(7): e134.
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