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Volume 141(1);  May 2006
On the Inside
On the Inside
Peter V. Minorsky
Plant Physiol. 2006 May; 141(1): 1–2. doi: 10.1104/pp.104.900190.
PMCID: PMC1459305
Scientific Correspondence
Sequencing Multiple and Diverse Rice Varieties. Connecting Whole-Genome Variation with Phenotypes
Kenneth L. McNally, Richard Bruskiewich, David Mackill, C. Robin Buell, Jan E. Leach, and Hei Leung
Plant Physiol. 2006 May; 141(1): 26–31. doi: 10.1104/pp.106.077313.
PMCID: PMC1459310
Bioinformatics
Development of a Controlled Vocabulary and Software Application to Analyze Fruit Shape Variation in Tomato and Other Plant Species
Marin Talbot Brewer, Lixin Lang, Kikuo Fujimura, Nancy Dujmovic, Simon Gray, and Esther van der Knaap
Plant Physiol. 2006 May; 141(1): 15–25. doi: 10.1104/pp.106.077867.
PMCID: PMC1459328
Breakthrough Technologies
LucTrap Vectors Are Tools to Generate Luciferase Fusions for the Quantification of Transcript and Protein Abundance in Vivo
Luz Irina A. Calderon-Villalobos, Carola Kuhnle, Hanbing Li, Mario Rosso, Bernd Weisshaar, and Claus Schwechheimer
Plant Physiol. 2006 May; 141(1): 3–14. doi: 10.1104/pp.106.078097.
PMCID: PMC1459313
Research Articles
Biochemical Processes and Macromolecular Structures
Proteomic Analysis of Seed Filling in Brassica napus. Developmental Characterization of Metabolic Isozymes Using High-Resolution Two-Dimensional Gel Electrophoresis
Martin Hajduch, Jill E. Casteel, Katherine E. Hurrelmeyer, Zhao Song, Ganesh Kumar Agrawal, and Jay J. Thelen
Plant Physiol. 2006 May; 141(1): 32–46. doi: 10.1104/pp.105.075390.
PMCID: PMC1459325
Cytochrome c Is Released in a Reactive Oxygen Species-Dependent Manner and Is Degraded via Caspase-Like Proteases in Tobacco Bright-Yellow 2 Cells en Route to Heat Shock-Induced Cell Death
Rosa Anna Vacca, Daniela Valenti, Antonella Bobba, Riccardo Sandro Merafina, Salvatore Passarella, and Ersilia Marra
Plant Physiol. 2006 May; 141(1): 208–219. doi: 10.1104/pp.106.078683.
PMCID: PMC1459318
Maize cDNAs Expressed in Endosperm Encode Functional Farnesyl Diphosphate Synthase with Geranylgeranyl Diphosphate Synthase Activity
Miguel Cervantes-Cervantes, Cynthia E. Gallagher, Changfu Zhu, and Eleanore T. Wurtzel
Plant Physiol. 2006 May; 141(1): 220–231. doi: 10.1104/pp.106.077008.
PMCID: PMC1459322
Bioenergetics and Photosynthesis
Carbonic Anhydrase and Its Influence on Carbon Isotope Discrimination during C4 Photosynthesis. Insights from Antisense RNA in Flaveria bidentis
Asaph B. Cousins, Murray R. Badger, and Susanne von Caemmerer
Plant Physiol. 2006 May; 141(1): 232–242. doi: 10.1104/pp.106.077776.
PMCID: PMC1459309
Cell Biology and Signal Transduction
Identification and Characterization of a Stress-Inducible and a Constitutive Small Heat-Shock Protein Targeted to the Matrix of Plant Peroxisomes
Changle Ma, Martin Haslbeck, Lavanya Babujee, Olaf Jahn, and Sigrun Reumann
Plant Physiol. 2006 May; 141(1): 47–60. doi: 10.1104/pp.105.073841.
PMCID: PMC1459323
Cryptochrome 1 from Brassica napus Is Up-Regulated by Blue Light and Controls Hypocotyl/Stem Growth and Anthocyanin Accumulation
Mithu Chatterjee, Pooja Sharma, and Jitendra P. Khurana
Plant Physiol. 2006 May; 141(1): 61–74. doi: 10.1104/pp.105.076323.
PMCID: PMC1459308
Plastid Cues Posttranscriptionally Regulate the Accumulation of Key Enzymes of the Methylerythritol Phosphate Pathway in Arabidopsis
Susanna Sauret-Güeto, Patricia Botella-Pavía, Úrsula Flores-Pérez, Jaime F. Martínez-García, Carolina San Román, Patricia León, Albert Boronat, and Manuel Rodríguez-Concepción
Plant Physiol. 2006 May; 141(1): 75–84. doi: 10.1104/pp.106.079855.
PMCID: PMC1459331
Identification of Primary Target Genes of Phytochrome Signaling. Early Transcriptional Control during Shade Avoidance Responses in Arabidopsis
Irma Roig-Villanova, Jordi Bou, Céline Sorin, Paul F. Devlin, and Jaime F. Martínez-García
Plant Physiol. 2006 May; 141(1): 85–96. doi: 10.1104/pp.105.076331.
PMCID: PMC1459307
Development and Hormone Action
CYP707A1 and CYP707A2, Which Encode Abscisic Acid 8′-Hydroxylases, Are Indispensable for Proper Control of Seed Dormancy and Germination in Arabidopsis
Masanori Okamoto, Ayuko Kuwahara, Mistunori Seo, Tetsuo Kushiro, Tadao Asami, Nobuhiro Hirai, Yuji Kamiya, Tomokazu Koshiba, and Eiji Nambara
Plant Physiol. 2006 May; 141(1): 97–107. doi: 10.1104/pp.106.079475.
PMCID: PMC1459320
G-Protein Complex Mutants Are Hypersensitive to Abscisic Acid Regulation of Germination and Postgermination Development
Sona Pandey, Jin-Gui Chen, Alan M. Jones, and Sarah M. Assmann
Plant Physiol. 2006 May; 141(1): 243–256. doi: 10.1104/pp.106.079038.
PMCID: PMC1459317
Environmental Stress and Adaptation to Stress
An Improved Grafting Technique for Mature Arabidopsis Plants Demonstrates Long-Distance Shoot-to-Root Transport of Phytochelatins in Arabidopsis
Alice Chen, Elizabeth A. Komives, and Julian I. Schroeder
Plant Physiol. 2006 May; 141(1): 108–120. doi: 10.1104/pp.105.072637.
PMCID: PMC1459314
Rice HYDROPEROXIDE LYASES with Unique Expression Patterns Generate Distinct Aldehyde Signatures in Arabidopsis
E.W. Chehab, G. Raman, J.W. Walley, J.V. Perea, G. Banu, S. Theg, and K. Dehesh
Plant Physiol. 2006 May; 141(1): 121–134. doi: 10.1104/pp.106.078592.
PMCID: PMC1459319
Functional Characterization of Ice Plant SKD1, an AAA-Type ATPase Associated with the Endoplasmic Reticulum-Golgi Network, and Its Role in Adaptation to Salt Stress
Yingtzy Jou, Chih-Pin Chiang, Guang-Yuh Jauh, and Hungchen Emilie Yen
Plant Physiol. 2006 May; 141(1): 135–146. doi: 10.1104/pp.106.076786.
PMCID: PMC1459316
Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants
Jan T. Svensson, Cristina Crosatti, Chiara Campoli, Roberto Bassi, Antonio Michele Stanca, Timothy J. Close, and Luigi Cattivelli
Plant Physiol. 2006 May; 141(1): 257–270. doi: 10.1104/pp.105.072645.
PMCID: PMC1459312
Genetics, Genomics, and Molecular Evolution
Analyses of Expressed Sequence Tags from Apple
Richard D. Newcomb, Ross N. Crowhurst, Andrew P. Gleave, Erik H.A. Rikkerink, Andrew C. Allan, Lesley L. Beuning, Judith H. Bowen, Emma Gera, Kim R. Jamieson, Bart J. Janssen, William A. Laing, Steve McArtney, Bhawana Nain, Gavin S. Ross, Kimberley C. Snowden, Edwige J.F. Souleyre, Eric F. Walton, and Yar-Khing Yauk
Plant Physiol. 2006 May; 141(1): 147–166. doi: 10.1104/pp.105.076208.
PMCID: PMC1459330
Gene Expression Profiling Using cDNA Microarray Analysis of the Sexual Reproduction Stage of the Unicellular Charophycean Alga Closterium peracerosum-strigosum-littorale Complex
Hiroyuki Sekimoto, Yoichi Tanabe, Yuki Tsuchikane, Hiroshi Shirosaki, Hiroo Fukuda, Taku Demura, and Motomi Ito
Plant Physiol. 2006 May; 141(1): 271–279. doi: 10.1104/pp.106.078048.
PMCID: PMC1459326
Plants Interacting with Other Organisms
Recruitment of Novel Calcium-Binding Proteins for Root Nodule Symbiosis in Medicago truncatula
Junqi Liu, Susan S. Miller, Michelle Graham, Bruna Bucciarelli, Christina M. Catalano, D. Janine Sherrier, Deborah A. Samac, Sergey Ivashuta, Maria Fedorova, Peter Matsumoto, J. Stephen Gantt, and Carroll P. Vance
Plant Physiol. 2006 May; 141(1): 167–177. doi: 10.1104/pp.106.076711.
PMCID: PMC1459311
Xanthan Induces Plant Susceptibility by Suppressing Callose Deposition
Maximina H. Yun, Pablo S. Torres, Mohamed El Oirdi, Luciano A. Rigano, Rocio Gonzalez-Lamothe, María Rosa Marano, Atilio P. Castagnaro, Marcelo A. Dankert, Kamal Bouarab, and Adrián A. Vojnov
Plant Physiol. 2006 May; 141(1): 178–187. doi: 10.1104/pp.105.074542.
PMCID: PMC1459321
Medicago truncatula Mutants Demonstrate the Role of Plant Calcium Oxalate Crystals as an Effective Defense against Chewing Insects
Kenneth L. Korth, Sarah J. Doege, Sang-Hyuck Park, Fiona L. Goggin, Qin Wang, S. Karen Gomez, Guangjie Liu, Lingling Jia, and Paul A. Nakata
Plant Physiol. 2006 May; 141(1): 188–195. doi: 10.1104/pp.106.076737.
PMCID: PMC1459329
Adenylate-Coupled Ion Movement. A Mechanism for the Control of Nodule Permeability to O2 Diffusion
Hui Wei and David B. Layzell
Plant Physiol. 2006 May; 141(1): 280–287. doi: 10.1104/pp.106.077552.
PMCID: PMC1459327
Systems Biology, Molecular Biology, and Gene Regulation
Identification of a Vacuolar Sucrose Transporter in Barley and Arabidopsis Mesophyll Cells by a Tonoplast Proteomic Approach
Anne Endler, Stefan Meyer, Silvia Schelbert, Thomas Schneider, Winfriede Weschke, Shaun W. Peters, Felix Keller, Sacha Baginsky, Enrico Martinoia, and Ulrike G. Schmidt
Plant Physiol. 2006 May; 141(1): 196–207. doi: 10.1104/pp.106.079533.
PMCID: PMC1459324
Diurnal Regulation of the Brassinosteroid-Biosynthetic CPD Gene in Arabidopsis
Simona Bancos, Anna-Mária Szatmári, Julie Castle, László Kozma-Bognár, Kyomi Shibata, Takao Yokota, Gerard J. Bishop, Ferenc Nagy, and Miklós Szekeres
Plant Physiol. 2006 May; 141(1): 299–309. doi: 10.1104/pp.106.079145.
PMCID: PMC1459315
Whole Plant and Ecophysiology
The Shoot-Specific Expression of γ-Glutamylcysteine Synthetase Directs the Long-Distance Transport of Thiol-Peptides to Roots Conferring Tolerance to Mercury and Arsenic
Yujing Li, Om Parkash Dankher, Laura Carreira, Aaron P. Smith, and Richard B. Meagher
Plant Physiol. 2006 May; 141(1): 288–298. doi: 10.1104/pp.105.074815.
PMCID: PMC1459306
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