| | Other Issues: latest | archiveEvolutionary History and Stress Regulation of Plant Receptor-Like Kinase/Pelle Genes Melissa D. Lehti-Shiu, Cheng Zou, Kousuke Hanada, and Shin-Han Shiu PMCID: PMC2675737 System Analysis of an Arabidopsis Mutant Altered in de Novo Fatty Acid Synthesis Reveals Diverse Changes in Seed Composition and Metabolism Mingjie Chen, Brian P. Mooney, Martin Hajduch, Trupti Joshi, Mingyi Zhou, Dong Xu, and Jay J. Thelen PMCID: PMC2675738 Analysis of Acyl Fluxes through Multiple Pathways of Triacylglycerol Synthesis in Developing Soybean Embryos Philip D. Bates, Timothy P. Durrett, John B. Ohlrogge, and Mike Pollard PMCID: PMC2675710 A Nuclear Gene Encoding the Iron-Sulfur Subunit of Mitochondrial Complex II Is Regulated by B3 Domain Transcription Factors during Seed Development in Arabidopsis Hannetz Roschzttardtz, Ignacia Fuentes, Marcos Vásquez, Claudia Corvalán, Gabriel León, Isabel Gómez, Alejandro Araya, Loreto Holuigue, Jesús Vicente-Carbajosa, and Xavier Jordana PMCID: PMC2675723 In-Depth Proteome Analysis of Arabidopsis Leaf Peroxisomes Combined with in Vivo Subcellular Targeting Verification Indicates Novel Metabolic and Regulatory Functions of Peroxisomes Sigrun Reumann, Sheng Quan, Kyaw Aung, Pingfang Yang, Kalpana Manandhar-Shrestha, Danielle Holbrook, Nicole Linka, Robert Switzenberg, Curtis G. Wilkerson, Andreas P.M. Weber, Laura J. Olsen, and Jianping Hu PMCID: PMC2675712 Identification and Functional Characterization of Inhibitor-3, a Regulatory Subunit of Protein Phosphatase 1 in Plants Atsushi Takemiya, Chie Ariyoshi, and Ken-ichiro Shimazaki PMCID: PMC2675749 The Barley Magnesium Chelatase 150-kD Subunit Is Not an Abscisic Acid Receptor André H. Müller and Mats Hansson PMCID: PMC2675733 An Arabidopsis Mitogen-Activated Protein Kinase Cascade, MKK9-MPK6, Plays a Role in Leaf Senescence Chunjiang Zhou, Zhaohui Cai, Yongfeng Guo, and Susheng Gan PMCID: PMC2675715 Loss of 26S Proteasome Function Leads to Increased Cell Size and Decreased Cell Number in Arabidopsis Shoot Organs Jasmina Kurepa, Songhu Wang, Yan Li, David Zaitlin, Andrew J. Pierce, and Jan A. Smalle PMCID: PMC2675745 Studies of aberrant phyllotaxy1 Mutants of Maize Indicate Complex Interactions between Auxin and Cytokinin Signaling in the Shoot Apical Meristem Byeong-ha Lee, Robyn Johnston, Yan Yang, Andrea Gallavotti, Mikiko Kojima, Bruno A.N. Travençolo, Luciano da F. Costa, Hitoshi Sakakibara, and David Jackson PMCID: PMC2675719 Cellular Response of Pea Plants to Cadmium Toxicity: Cross Talk between Reactive Oxygen Species, Nitric Oxide, and Calcium María Rodríguez-Serrano, María C. Romero-Puertas, Diana M. Pazmiño, Pilar S. Testillano, María C. Risueño, Luis A. del Río, and Luisa M. Sandalio PMCID: PMC2675729 Enhanced Tolerance to Chilling Stress in OsMYB3R-2 Transgenic Rice Is Mediated by Alteration in Cell Cycle and Ectopic Expression of Stress Genes Qibin Ma, Xiaoyan Dai, Yunyuan Xu, Jing Guo, Yaju Liu, Na Chen, Jun Xiao, Dajian Zhang, Zhihong Xu, Xiansheng Zhang, and Kang Chong PMCID: PMC2675741 The Analysis of Arabidopsis Nicotianamine Synthase Mutants Reveals Functions for Nicotianamine in Seed Iron Loading and Iron Deficiency Responses Marco Klatte, Mara Schuler, Markus Wirtz, Claudia Fink-Straube, Rüdiger Hell, and Petra Bauer PMCID: PMC2675739 Elevated Carbon Dioxide Improves Plant Iron Nutrition through Enhancing the Iron-Deficiency-Induced Responses under Iron-Limited Conditions in Tomato Chong Wei Jin, Shao Ting Du, Wei Wei Chen, Gui Xin Li, Yong Song Zhang, and Shao Jian Zheng PMCID: PMC2675727 STOP1 Regulates Multiple Genes That Protect Arabidopsis from Proton and Aluminum Toxicities Yoshiharu Sawaki, Satoshi Iuchi, Yasufumi Kobayashi, Yuriko Kobayashi, Takashi Ikka, Nozomu Sakurai, Miki Fujita, Kazuo Shinozaki, Daisuke Shibata, Masatomo Kobayashi, and Hiroyuki Koyama PMCID: PMC2675709 Identification and Analyses of Candidate Genes for Rpp4-Mediated Resistance to Asian Soybean Rust in Soybean Jenelle D.F. Meyer, Danielle C.G. Silva, Chunling Yang, Kerry F. Pedley, Chunquan Zhang, Martijn van de Mortel, John H. Hill, Randy C. Shoemaker, Ricardo V. Abdelnoor, Steven A. Whitham, and Michelle A. Graham PMCID: PMC2675740 Suppression of a Phospholipase D Gene, OsPLDβ1, Activates Defense Responses and Increases Disease Resistance in Rice Takeshi Yamaguchi, Masaharu Kuroda, Hiromoto Yamakawa, Taketo Ashizawa, Kazuyuki Hirayae, Leona Kurimoto, Tomonori Shinya, and Naoto Shibuya PMCID: PMC2675732 Genetic Dissection of Verticillium Wilt Resistance Mediated by Tomato Ve1 Emilie F. Fradin, Zhao Zhang, Juan C. Juarez Ayala, Christian D.M. Castroverde, Ross N. Nazar, Jane Robb, Chun-Ming Liu, and Bart P.H.J. Thomma PMCID: PMC2675724 The Synthetic Elicitor 3,5-Dichloroanthranilic Acid Induces NPR1-Dependent and NPR1-Independent Mechanisms of Disease Resistance in Arabidopsis Colleen Knoth, Melinda S. Salus, Thomas Girke, and Thomas Eulgem PMCID: PMC2675713 Roles of Morphology, Anatomy, and Aquaporins in Determining Contrasting Hydraulic Behavior of Roots Helen Bramley, Neil C. Turner, David W. Turner, and Stephen D. Tyerman PMCID: PMC2675714 Transcriptional Regulation of the Ethylene Response Factor LeERF2 in the Expression of Ethylene Biosynthesis Genes Controls Ethylene Production in Tomato and Tobacco Zhijin Zhang, Haiwen Zhang, Ruidan Quan, Xue-Chen Wang, and Rongfeng Huang PMCID: PMC2675746 The Phloem-Delivered RNA Pool Contains Small Noncoding RNAs and Interferes with Translation Shoudong Zhang, Li Sun, and Friedrich Kragler PMCID: PMC2675743 Rice Virescent3 and Stripe1 Encoding the Large and Small Subunits of Ribonucleotide Reductase Are Required for Chloroplast Biogenesis during Early Leaf Development Soo-Cheul Yoo, Sung-Hwan Cho, Hiroki Sugimoto, Jinjie Li, Kensuke Kusumi, Hee-Jong Koh, Koh Iba, and Nam-Chon Paek PMCID: PMC2675711 Grapevine MATE-Type Proteins Act as Vacuolar H+-Dependent Acylated Anthocyanin Transporters Camila Gomez, Nancy Terrier, Laurent Torregrosa, Sandrine Vialet, Alexandre Fournier-Level, Clotilde Verriès, Jean-Marc Souquet, Jean-Paul Mazauric, Markus Klein, Véronique Cheynier, and Agnès Ageorges PMCID: PMC2675721 An Aldehyde Oxidase in Developing Seeds of Arabidopsis Converts Benzaldehyde to Benzoic Acid Mwafaq Ibdah, Ying-Tung Chen, Curtis G. Wilkerson, and Eran Pichersky PMCID: PMC2675751 Phospholipase D Activation Is an Early Component of the Salicylic Acid Signaling Pathway in Arabidopsis Cell Suspensions Ondřej Krinke, Matyáš Flemr, Chantal Vergnolle, Sylvie Collin, Jean-Pierre Renou, Ludivine Taconnat, Agnès Yu, Lenka Burketová, Olga Valentová, Alain Zachowski, and Eric Ruelland PMCID: PMC2675726 Involvement of Phytosulfokine in the Attenuation of Stress Response during the Transdifferentiation of Zinnia Mesophyll Cells into Tracheary Elements Hiroyasu Motose, Kuninori Iwamoto, Satoshi Endo, Taku Demura, Youji Sakagami, Yoshikatsu Matsubayashi, Kevin L. Moore, and Hiroo Fukuda PMCID: PMC2675742 Developmental and Hormonal Regulation of Gibberellin Biosynthesis and Catabolism in Pea Fruit Jocelyn A. Ozga, Dennis M. Reinecke, Belay T. Ayele, Phuong Ngo, Courtney Nadeau, and Aruna D. Wickramarathna PMCID: PMC2675736 The Arabidopsis RING Finger E3 Ligase RHA2a Is a Novel Positive Regulator of Abscisic Acid Signaling during Seed Germination and Early Seedling Development Qingyun Bu, Hongmei Li, Qingzhen Zhao, Hongling Jiang, Qingzhe Zhai, Jie Zhang, Xiaoyan Wu, Jiaqiang Sun, Qi Xie, Daowen Wang, and Chuanyou Li PMCID: PMC2675735 Strigolactone Acts Downstream of Auxin to Regulate Bud Outgrowth in Pea and Arabidopsis Philip B. Brewer, Elizabeth A. Dun, Brett J. Ferguson, Catherine Rameau, and Christine A. Beveridge PMCID: PMC2675716 Epistatic Interactions between Opaque2 Transcriptional Activator and Its Target Gene CyPPDK1 Control Kernel Trait Variation in Maize Domenica Manicacci, Letizia Camus-Kulandaivelu, Marie Fourmann, Chantal Arar, Stéphanie Barrault, Agnès Rousselet, Noël Feminias, Luciano Consoli, Lisa Francès, Valérie Méchin, Alain Murigneux, Jean-Louis Prioul, Alain Charcosset, and Catherine Damerval PMCID: PMC2675748 Physiological Roles of Glutathione S-Transferases in Soybean Root Nodules David A. Dalton, Chris Boniface, Zachary Turner, Amy Lindahl, Hyeon Jeong Kim, Laura Jelinek, Manjula Govindarajulu, Richard E. Finger, and Christopher G. Taylor PMCID: PMC2675717 HYPOTrace: Image Analysis Software for Measuring Hypocotyl Growth and Shape Demonstrated on Arabidopsis Seedlings Undergoing Photomorphogenesis Liya Wang, Ioan Vlad Uilecan, Amir H. Assadi, Christine A. Kozmik, and Edgar P. Spalding PMCID: PMC2663732 In Situ Investigation of Leaf Water Status by Portable Unilateral Nuclear Magnetic Resonance Donatella Capitani, Federico Brilli, Luisa Mannina, Noemi Proietti, and Francesco Loreto PMCID: PMC2663758 Molecular Modeling and Site-Directed Mutagenesis Reveal Essential Residues for Catalysis in a Prokaryote-Type Aspartate Aminotransferase Fernando de la Torre, Aurelio A. Moya-García, María-Fernanda Suárez, Carlos Rodríguez-Caso, Rafael A. Cañas, Francisca Sánchez-Jiménez, and Francisco M. Cánovas PMCID: PMC2663736 Biologically Closed Electrical Circuits in Venus Flytrap Alexander G. Volkov, Holly Carrell, and Vladislav S. Markin PMCID: PMC2663737 AtVPS45 Is a Positive Regulator of the SYP41/SYP61/VTI12 SNARE Complex Involved in Trafficking of Vacuolar Cargo Jan Zouhar, Enrique Rojo, and Diane C. Bassham PMCID: PMC2663731 Autophagy Is Enhanced and Floral Development Is Impaired in AtHVA22d RNA Interference Arabidopsis Ching-Nen Nathan Chen, Hau-Ren Chen, Su-Ying Yeh, Gina Vittore, and Tuan-Hua David Ho PMCID: PMC2663764 Silencing the Hydroxyproline-Rich Glycopeptide Systemin Precursor in Two Accessions of Nicotiana attenuata Alters Flower Morphology and Rates of Self-Pollination Beatrice Berger and Ian T. Baldwin PMCID: PMC2663750 Auxin and Ethylene Regulate Elongation Responses to Neighbor Proximity Signals Independent of Gibberellin and DELLA Proteins in Arabidopsis Ronald Pierik, Tanja Djakovic-Petrovic, Diederik H. Keuskamp, Mieke de Wit, and Laurentius A.C.J. Voesenek PMCID: PMC2663759 MIKC* MADS Domain Heterodimers Are Required for Pollen Maturation and Tube Growth in Arabidopsis Benjamin J. Adamczyk and Donna E. Fernandez PMCID: PMC2663741 The Low-Oxygen-Induced NAC Domain Transcription Factor ANAC102 Affects Viability of Arabidopsis Seeds following Low-Oxygen Treatment Jed A. Christianson, Iain W. Wilson, Danny J. Llewellyn, and Elizabeth S. Dennis PMCID: PMC2663757 Exploring the Mechanism of Physcomitrella patens Desiccation Tolerance through a Proteomic Strategy Xiao Qin Wang, Ping Fang Yang, Zheng Liu, Wei Zhong Liu, Yong Hu, Hui Chen, Ting Yun Kuang, Zhen Ming Pei, Shi Hua Shen, and Yi Kun He PMCID: PMC2663739 Methyl Jasmonate Reduces Grain Yield by Mediating Stress Signals to Alter Spikelet Development in Rice Eun Hye Kim, Youn Shic Kim, Su-Hyun Park, Yeon Jong Koo, Yang Do Choi, Yong-Yoon Chung, In-Jung Lee, and Ju-Kon Kim PMCID: PMC2663756 AtMyb41 Regulates Transcriptional and Metabolic Responses to Osmotic Stress in Arabidopsis Felix Lippold, Diego H. Sanchez, Magdalena Musialak, Armin Schlereth, Wolf-Ruediger Scheible, Dirk K. Hincha, and Michael K. Udvardi PMCID: PMC2663747 Molecular and Genetic Evidence for the Key Role of AtCaM3 in Heat-Shock Signal Transduction in Arabidopsis Wei Zhang, Ren-Gang Zhou, Ying-Jie Gao, Shu-Zhi Zheng, Peng Xu, Su-Qiao Zhang, and Da-Ye Sun PMCID: PMC2663753 The Temperature-Sensitive brush Mutant of the Legume Lotus japonicus Reveals a Link between Root Development and Nodule Infection by Rhizobia Makoto Maekawa-Yoshikawa, Judith Müller, Naoya Takeda, Takaki Maekawa, Shusei Sato, Satoshi Tabata, Jillian Perry, Trevor L. Wang, Martin Groth, Andreas Brachmann, and Martin Parniske PMCID: PMC2663734 Ethylene Modulates the Role of NONEXPRESSOR OF PATHOGENESIS-RELATED GENES1 in Cross Talk between Salicylate and Jasmonate Signaling Antonio Leon-Reyes, Steven H. Spoel, Elvira S. De Lange, Hiroshi Abe, Masatomo Kobayashi, Shinya Tsuda, Frank F. Millenaar, Rob A.M. Welschen, Tita Ritsema, and Corné M.J. Pieterse PMCID: PMC2663751 Inhibition of Tobacco Mosaic Virus Movement by Expression of an Actin-Binding Protein Christina Hofmann, Annette Niehl, Adrian Sambade, André Steinmetz, and Manfred Heinlein PMCID: PMC2663746 Subcellular Localization and Functional Analysis of the Arabidopsis GTPase RabE Elena Bray Speth, Lori Imboden, Paula Hauck, and Sheng Yang He PMCID: PMC2663744 Crassulacean Acid Metabolism and Epiphytism Linked to Adaptive Radiations in the Orchidaceae Katia Silvera, Louis S. Santiago, John C. Cushman, and Klaus Winter PMCID: PMC2663729 Inhibition of SNF1-Related Protein Kinase1 Activity and Regulation of Metabolic Pathways by Trehalose-6-Phosphate Yuhua Zhang, Lucia F. Primavesi, Deveraj Jhurreea, P. John Andralojc, Rowan A.C. Mitchell, Stephen J. Powers, Henriette Schluepmann, Thierry Delatte, Astrid Wingler, and Matthew J. Paul PMCID: PMC2663748 Rubisco Oligomers Composed of Linked Small and Large Subunits Assemble in Tobacco Plastids and Have Higher Affinities for CO2 and O2 Spencer Michael Whitney, Heather Jean Kane, Robert L. Houtz, and Robert Edward Sharwood PMCID: PMC2663749 A Role for the TOC Complex in Arabidopsis Root Gravitropism John P. Stanga, Kanokporn Boonsirichai, John C. Sedbrook, Marisa S. Otegui, and Patrick H. Masson PMCID: PMC2663755 SnRK1 Isoforms AKIN10 and AKIN11 Are Differentially Regulated in Arabidopsis Plants under Phosphate Starvation Selene Fragoso, Laura Espíndola, Julio Páez-Valencia, Alicia Gamboa, Yolanda Camacho, Eleazar Martínez-Barajas, and Patricia Coello PMCID: PMC2663738 The Short-Rooted Phenotype of the brevis radix Mutant Partly Reflects Root Abscisic Acid Hypersensitivity Americo Rodrigues, Julia Santiago, Silvia Rubio, Angela Saez, Karen S. Osmont, Jose Gadea, Christian S. Hardtke, and Pedro L. Rodriguez PMCID: PMC2663733 Roles for Auxin, Cytokinin, and Strigolactone in Regulating Shoot Branching Brett J. Ferguson and Christine A. Beveridge PMCID: PMC2663762 Engineered Polyamine Catabolism Preinduces Tolerance of Tobacco to Bacteria and Oomycetes Panagiotis N. Moschou, Panagiotis F. Sarris, Nicholas Skandalis, Athina H. Andriopoulou, Konstantinos A. Paschalidis, Nickolas J. Panopoulos, and Kalliopi A. Roubelakis-Angelakis PMCID: PMC2663742 The Control of Autumn Senescence in European Aspen Yvan Fracheboud, Virginia Luquez, Lars Björkén, Andreas Sjödin, Hannele Tuominen, and Stefan Jansson PMCID: PMC2663763 Drought and Abscisic Acid Effects on Aquaporin Content Translate into Changes in Hydraulic Conductivity and Leaf Growth Rate: A Trans-Scale Approach Boris Parent, Charles Hachez, Elise Redondo, Thierry Simonneau, François Chaumont, and François Tardieu PMCID: PMC2663730 Analysis of the Nicotiana tabacum Stigma/Style Transcriptome Reveals Gene Expression Differences between Wet and Dry Stigma Species Andréa C. Quiapim, Michael S. Brito, Luciano A.S. Bernardes, Idalete daSilva, Iran Malavazi, Henrique C. DePaoli, Jeanne B. Molfetta-Machado, Silvana Giuliatti, Gustavo H. Goldman, and Maria Helena S. Goldman PMCID: PMC2649396 Positive Fluorescent Selection Permits Precise, Rapid, and In-Depth Overexpression Analysis in Plant Protoplasts Bastiaan O.R. Bargmann and Kenneth D. Birnbaum PMCID: PMC2649414 A Small Family of Chloroplast Atypical Thioredoxins Inbal Dangoor, Hadas Peled-Zehavi, Alexander Levitan, Ohad Pasand, and Avihai Danon PMCID: PMC2649386 Chloroplast NADPH-Thioredoxin Reductase Interacts with Photoperiodic Development in Arabidopsis Anna Lepistö, Saijaliisa Kangasjärvi, Eeva-Maria Luomala, Günter Brader, Nina Sipari, Mika Keränen, Markku Keinänen, and Eevi Rintamäki PMCID: PMC2649390 Constitutive Repression and Activation of Auxin Signaling in Arabidopsis Hanbing Li, Yan Cheng, Angus Murphy, Gretchen Hagen, and Tom J. Guilfoyle PMCID: PMC2649382 The Signal Peptide Peptidase Is Required for Pollen Function in Arabidopsis Sungwon Han, Laura Green, and Danny J. Schnell PMCID: PMC2649412 Highly Diversified Molecular Evolution of Downstream Transcription Start Sites in Rice and Arabidopsis Tsuyoshi Tanaka, Kanako O. Koyanagi, and Takeshi Itoh PMCID: PMC2649393 Molecular and Functional Characterization of PEBP Genes in Barley Reveal the Diversification of Their Roles in Flowering Rie Kikuchi, Hiroyuki Kawahigashi, Tsuyu Ando, Takuji Tonooka, and Hirokazu Handa PMCID: PMC2649388 An Integrated Genomics Approach to Define Niche Establishment by Rhodococcus fascians Stephen Depuydt, Sandra Trenkamp, Alisdair R. Fernie, Samira Elftieh, Jean-Pierre Renou, Marnik Vuylsteke, Marcelle Holsters, and Danny Vereecke PMCID: PMC2649413 Eternal Youth, the Fate of Developing Arabidopsis Leaves upon Rhodococcus fascians Infection Stephen Depuydt, Lieven De Veylder, Marcelle Holsters, and Danny Vereecke PMCID: PMC2649406 Molecular Interactions between the Specialist Herbivore Manduca sexta (Lepidoptera, Sphigidae) and Its Natural Host Nicotiana attenuata. VIII. An Unbiased GCxGC-ToFMS Analysis of the Plant's Elicited Volatile Emissions Emmanuel Gaquerel, Alexander Weinhold, and Ian T. Baldwin PMCID: PMC2649405 Temporal Global Expression Data Reveal Known and Novel Salicylate-Impacted Processes and Regulators Mediating Powdery Mildew Growth and Reproduction on Arabidopsis Divya Chandran, Yu Chuan Tai, Gregory Hather, Julia Dewdney, Carine Denoux, Diane G. Burgess, Frederick M. Ausubel, Terence P. Speed, and Mary C. Wildermuth PMCID: PMC2649394 A Rice Kinase-Protein Interaction Map Xiaodong Ding, Todd Richter, Mei Chen, Hiroaki Fujii, Young Su Seo, Mingtang Xie, Xianwu Zheng, Siddhartha Kanrar, Rebecca A. Stevenson, Christopher Dardick, Ying Li, Hao Jiang, Yan Zhang, Fahong Yu, Laura E. Bartley, Mawsheng Chern, Rebecca Bart, Xiuhua Chen, Lihuang Zhu, William G. Farmerie, Michael Gribskov, Jian-Kang Zhu, Michael E. Fromm, Pamela C. Ronald, and Wen-Yuan Song PMCID: PMC2649385 Gene and Metabolite Regulatory Network Analysis of Early Developing Fruit Tissues Highlights New Candidate Genes for the Control of Tomato Fruit Composition and Development Fabien Mounet, Annick Moing, Virginie Garcia, Johann Petit, Michael Maucourt, Catherine Deborde, Stéphane Bernillon, Gwénaëlle Le Gall, Ian Colquhoun, Marianne Defernez, Jean-Luc Giraudel, Dominique Rolin, Christophe Rothan, and Martine Lemaire-Chamley PMCID: PMC2649409 Substrates Related to Chromatin and to RNA-Dependent Processes Are Modified by Arabidopsis SUMO Isoforms That Differ in a Conserved Residue with Influence on Desumoylation Ruchika Budhiraja, Rebecca Hermkes, Stefan Müller, Jürgen Schmidt, Thomas Colby, Kishore Panigrahi, George Coupland, and Andreas Bachmair PMCID: PMC2649401 Proteins from Multiple Metabolic Pathways Associate with Starch Biosynthetic Enzymes in High Molecular Weight Complexes: A Model for Regulation of Carbon Allocation in Maize Amyloplasts Tracie A. Hennen-Bierwagen, Qiaohui Lin, Florent Grimaud, Véronique Planchot, Peter L. Keeling, Martha G. James, and Alan M. Myers PMCID: PMC2649383 How Does Cyclic Electron Flow Alleviate Photoinhibition in Arabidopsis? Shunichi Takahashi, Sara E. Milward, Da-Yong Fan, Wah Soon Chow, and Murray R. Badger PMCID: PMC2649389 Experimental Evidence for Ascorbate-Dependent Electron Transport in Leaves with Inactive Oxygen-Evolving Complexes Szilvia Z. Tóth, Jos T. Puthur, Valéria Nagy, and Győző Garab PMCID: PMC2649403 Trichoderma virens, a Plant Beneficial Fungus, Enhances Biomass Production and Promotes Lateral Root Growth through an Auxin-Dependent Mechanism in Arabidopsis Hexon Angel Contreras-Cornejo, Lourdes Macías-Rodríguez, Carlos Cortés-Penagos, and José López-Bucio PMCID: PMC2649400 Phloem Loading Strategies in Three Plant Species That Transport Sugar Alcohols Edwin J. Reidel, Emilie A. Rennie, Véronique Amiard, Lailiang Cheng, and Robert Turgeon PMCID: PMC2649384 Tissue-Specific Expression Patterns of Arabidopsis NF-Y Transcription Factors Suggest Potential for Extensive Combinatorial Complexity Nicholas Siefers, Kristen K. Dang, Roderick W. Kumimoto, William Edwards Bynum, IV, Gregory Tayrose, and Ben F. Holt, III PMCID: PMC2633833 Establishing RNA Interference as a Reverse-Genetic Approach for Gene Functional Analysis in Protoplasts Zhiyang Zhai, Thanwalee Sooksa-nguan, and Olena K. Vatamaniuk PMCID: PMC2633838 Decreased Mitochondrial Activities of Malate Dehydrogenase and Fumarase in Tomato Lead to Altered Root Growth and Architecture via Diverse Mechanisms Margaretha J. van der Merwe, Sonia Osorio, Thomas Moritz, Adriano Nunes-Nesi, and Alisdair R. Fernie PMCID: PMC2633863 Establishment of a Protein Reference Map for Soybean Root Hair Cells Laurent Brechenmacher, Joohyun Lee, Sherri Sachdev, Zhao Song, Tran Hong Nha Nguyen, Trupti Joshi, Nathan Oehrle, Marc Libault, Brian Mooney, Dong Xu, Bret Cooper, and Gary Stacey PMCID: PMC2633823 Analyses of Advanced Rice Anther Transcriptomes Reveal Global Tapetum Secretory Functions and Potential Proteins for Lipid Exine Formation Ming-Der Huang, Fu-Jin Wei, Cheng-Cheih Wu, Yue-Ie Caroline Hsing, and Anthony H.C. Huang PMCID: PMC2633857 Experimental Analysis of the Rice Mitochondrial Proteome, Its Biogenesis, and Heterogeneity Shaobai Huang, Nicolas L. Taylor, Reena Narsai, Holger Eubel, James Whelan, and A. Harvey Millar PMCID: PMC2633852 Wheat Cryptochromes: Subcellular Localization and Involvement in Photomorphogenesis and Osmotic Stress Responses Pei Xu, Yang Xiang, Huilan Zhu, Haibin Xu, Zhengzhi Zhang, Caiqin Zhang, Lixia Zhang, and Zhengqiang Ma PMCID: PMC2633824 Ricinosomes Predict Programmed Cell Death Leading to Anther Dehiscence in Tomato Adriano Senatore, Christopher P. Trobacher, and John S. Greenwood PMCID: PMC2633828 A Pollen Protein, NaPCCP, That Binds Pistil Arabinogalactan Proteins Also Binds Phosphatidylinositol 3-Phosphate and Associates with the Pollen Tube Endomembrane System Christopher B. Lee, Sunran Kim, and Bruce McClure PMCID: PMC2633847 Alterations in the Endogenous Ascorbic Acid Content Affect Flowering Time in Arabidopsis Simeon O. Kotchoni, Katherine E. Larrimore, Madhumati Mukherjee, Chase F. Kempinski, and Carina Barth PMCID: PMC2633856 InPSR26, a Putative Membrane Protein, Regulates Programmed Cell Death during Petal Senescence in Japanese Morning Glory Kenichi Shibuya, Tetsuya Yamada, Tomoko Suzuki, Keiichi Shimizu, and Kazuo Ichimura PMCID: PMC2633835 High Humidity Induces Abscisic Acid 8′-Hydroxylase in Stomata and Vasculature to Regulate Local and Systemic Abscisic Acid Responses in Arabidopsis Masanori Okamoto, Yoko Tanaka, Suzanne R. Abrams, Yuji Kamiya, Motoaki Seki, and Eiji Nambara PMCID: PMC2633821 GNOM-Mediated Vesicular Trafficking Plays an Essential Role in Hydrotropism of Arabidopsis Roots Yutaka Miyazawa, Akiko Takahashi, Akie Kobayashi, Tomoko Kaneyasu, Nobuharu Fujii, and Hideyuki Takahashi PMCID: PMC2633850 Tissue Specificity and Evolution of Meristematic WOX3 Function Rena Shimizu, Jiabing Ji, Eric Kelsey, Kazuhiro Ohtsu, Patrick S. Schnable, and Michael J. Scanlon PMCID: PMC2633815 MYB108 Acts Together with MYB24 to Regulate Jasmonate-Mediated Stamen Maturation in Arabidopsis Ajin Mandaokar and John Browse PMCID: PMC2633834 Karrikins Discovered in Smoke Trigger Arabidopsis Seed Germination by a Mechanism Requiring Gibberellic Acid Synthesis and Light David C. Nelson, Julie-Anne Riseborough, Gavin R. Flematti, Jason Stevens, Emilio L. Ghisalberti, Kingsley W. Dixon, and Steven M. Smith PMCID: PMC2633839 FZR2/CCS52A1 Expression Is a Determinant of Endoreduplication and Cell Expansion in Arabidopsis Zachary Larson-Rabin, Ziyu Li, Patrick H. Masson, and Christopher D. Day PMCID: PMC2633822 Autophagy Plays a Role in Chloroplast Degradation during Senescence in Individually Darkened Leaves Shinya Wada, Hiroyuki Ishida, Masanori Izumi, Kohki Yoshimoto, Yoshinori Ohsumi, Tadahiko Mae, and Amane Makino PMCID: PMC2633819 Rice Aldehyde Dehydrogenase7 Is Needed for Seed Maturation and Viability Jun-Hye Shin, Sung-Ryul Kim, and Gynheung An PMCID: PMC2633853 Identification of an Apoplastic Protein Involved in the Initial Phase of Salt Stress Response in Rice Root by Two-Dimensional Electrophoresis Lei Zhang, Li-Hong Tian, Jun-Feng Zhao, Yun Song, Cui-Jun Zhang, and Yi Guo PMCID: PMC2633861 Thylakoid Lumen Carbonic Anhydrase (CAH3) Mutation Suppresses Air-Dier Phenotype of LCIB Mutant in Chlamydomonas reinhardtii Deqiang Duanmu, Yingjun Wang, and Martin H. Spalding PMCID: PMC2633820 Phytochelatin Synthesis Is Essential for the Detoxification of Excess Zinc and Contributes Significantly to the Accumulation of Zinc Pierre Tennstedt, Daniel Peisker, Christoph Böttcher, Aleksandra Trampczynska, and Stephan Clemens PMCID: PMC2633830 Mapping Metabolic and Transcript Temporal Switches during Germination in Rice Highlights Specific Transcription Factors and the Role of RNA Instability in the Germination Process Katharine A. Howell, Reena Narsai, Adam Carroll, Aneta Ivanova, Marc Lohse, Björn Usadel, A. Harvey Millar, and James Whelan PMCID: PMC2633829 Expansion and Diversification of the Populus R2R3-MYB Family of Transcription Factors Olivia Wilkins, Hardeep Nahal, Justin Foong, Nicholas J. Provart, and Malcolm M. Campbell PMCID: PMC2633813 GS52 Ecto-Apyrase Plays a Critical Role during Soybean Nodulation Manjula Govindarajulu, Sung-Yong Kim, Marc Libault, R. Howard Berg, Kiwamu Tanaka, Gary Stacey, and Christopher G. Taylor PMCID: PMC2633840 The Cauliflower Mosaic Virus Protein P6 Forms Motile Inclusions That Traffic along Actin Microfilaments and Stabilize Microtubules Phillip A. Harries, Karuppaiah Palanichelvam, Weichang Yu, James E. Schoelz, and Richard S. Nelson PMCID: PMC2633818 Xanthomonas campestris Overcomes Arabidopsis Stomatal Innate Immunity through a DSF Cell-to-Cell Signal-Regulated Virulence Factor Gustavo E. Gudesblat, Pablo S. Torres, and Adrián A. Vojnov PMCID: PMC2633826 Ectopic Expression of VvMybPA2 Promotes Proanthocyanidin Biosynthesis in Grapevine and Suggests Additional Targets in the Pathway Nancy Terrier, Laurent Torregrosa, Agnès Ageorges, Sandrine Vialet, Clotilde Verriès, Véronique Cheynier, and Charles Romieu PMCID: PMC2633825 Myoinositol Oxygenase Controls the Level of Myoinositol in Arabidopsis, But Does Not Increase Ascorbic Acid Stefanie Endres and Raimund Tenhaken PMCID: PMC2633846 CYP86A33-Targeted Gene Silencing in Potato Tuber Alters Suberin Composition, Distorts Suberin Lamellae, and Impairs the Periderm's Water Barrier Function Olga Serra, Marçal Soler, Carolin Hohn, Vincent Sauveplane, Franck Pinot, Rochus Franke, Lukas Schreiber, Salomé Prat, Marisa Molinas, and Mercè Figueras PMCID: PMC2633816 Psb28 Protein Is Involved in the Biogenesis of the Photosystem II Inner Antenna CP47 (PsbB) in the Cyanobacterium Synechocystis sp. PCC 6803 Marika Dobáková, Roman Sobotka, Martin Tichý, and Josef Komenda PMCID: PMC2633855 Regulation of Respiration and Fermentation to Control the Plant Internal Oxygen Concentration Ana Zabalza, Joost T. van Dongen, Anja Froehlich, Sandra N. Oliver, Benjamin Faix, Kapuganti Jagadis Gupta, Elmar Schmälzlin, Maria Igal, Luis Orcaray, Mercedes Royuela, and Peter Geigenberger PMCID: PMC2633817 Phosphatidylinositol (4,5)Bisphosphate Inhibits K+-Efflux Channel Activity in NT1 Tobacco Cultured Cells Xiaohong Ma, Oded Shor, Sofia Diminshtein, Ling Yu, Yang Ju Im, Imara Perera, Aaron Lomax, Wendy F. Boss, and Nava Moran PMCID: PMC2633837 NaCl-Induced Alternations of Cellular and Tissue Ion Fluxes in Roots of Salt-Resistant and Salt-Sensitive Poplar Species Jian Sun, Shaoliang Chen, Songxiang Dai, Ruigang Wang, Niya Li, Xin Shen, Xiaoyang Zhou, Cunfu Lu, Xiaojiang Zheng, Zanmin Hu, Zengkai Zhang, Jin Song, and Yue Xu PMCID: PMC2633858 Contrasting Responses of Photosynthesis to Salt Stress in the Glycophyte Arabidopsis and the Halophyte Thellungiella: Role of the Plastid Terminal Oxidase as an Alternative Electron Sink Piotr Stepien and Giles N. Johnson PMCID: PMC2633845 Histone H2B Deubiquitination Is Required for Transcriptional Activation of FLOWERING LOCUS C and for Proper Control of Flowering in Arabidopsis Robert Jeffrey Schmitz, Yosuke Tamada, Mark Robert Doyle, Xiaoyu Zhang, and Richard Mark Amasino PMCID: PMC2633843 GRASSIUS: A Platform for Comparative Regulatory Genomics across the Grasses Alper Yilmaz, Milton Y. Nishiyama, Jr., Bernardo Garcia Fuentes, Glaucia Mendes Souza, Daniel Janies, John Gray, and Erich Grotewold PMCID: PMC2613736 Tie-dyed1 Encodes a Novel, Phloem-Expressed Transmembrane Protein That Functions in Carbohydrate Partitioning Yi Ma, Thomas L. Slewinski, R. Frank Baker, and David M. Braun PMCID: PMC2613742 High Glycolate Oxidase Activity Is Required for Survival of Maize in Normal Air Israel Zelitch, Neil P. Schultes, Richard B. Peterson, Patrick Brown, and Thomas P. Brutnell PMCID: PMC2613714 suppressor of sessile spikelets1 Functions in the ramosa Pathway Controlling Meristem Determinacy in Maize Xianting Wu, Andrea Skirpan, and Paula McSteen PMCID: PMC2613725 The ATG Autophagic Conjugation System in Maize: ATG Transcripts and Abundance of the ATG8-Lipid Adduct Are Regulated by Development and Nutrient Availability Taijoon Chung, Anongpat Suttangkakul, and Richard D. Vierstra PMCID: PMC2613746 Genetic and Molecular Characterization of the VRN2 Loci in Tetraploid Wheat Assaf Distelfeld, Gabriela Tranquilli, Chengxia Li, Liuling Yan, and Jorge Dubcovsky PMCID: PMC2613703 Analysis of Intraspecies Diversity in Wheat and Barley Genomes Identifies Breakpoints of Ancient Haplotypes and Provides Insight into the Structure of Diploid and Hexaploid Triticeae Gene Pools Thomas Wicker, Simon G. Krattinger, Evans S. Lagudah, Takao Komatsuda, Mohammad Pourkheirandish, Takashi Matsumoto, Sylvie Cloutier, Laurenz Reiser, Hiroyuki Kanamori, Kazuhiro Sato, Dragan Perovic, Nils Stein, and Beat Keller PMCID: PMC2613701 Blufensin1 Negatively Impacts Basal Defense in Response to Barley Powdery Mildew Yan Meng, Matthew J. Moscou, and Roger P. Wise PMCID: PMC2613711 A Germin-Like Protein Gene Family Functions as a Complex Quantitative Trait Locus Conferring Broad-Spectrum Disease Resistance in Rice Patricia M. Manosalva, Rebecca M. Davidson, Bin Liu, Xiaoyuan Zhu, Scot H. Hulbert, Hei Leung, and Jan E. Leach PMCID: PMC2613727 OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice Kengo Yokosho, Naoki Yamaji, Daisei Ueno, Namiki Mitani, and Jian Feng Ma PMCID: PMC2613705 Antiquity and Function of CASTOR and POLLUX, the Twin Ion Channel-Encoding Genes Key to the Evolution of Root Symbioses in Plants Caiyan Chen, Cui Fan, Muqiang Gao, and Hongyan Zhu PMCID: PMC2613720 Characterization of an Autonomously Activated Plant ADP-Glucose Pyrophosphorylase Susan K. Boehlein, Janine R. Shaw, Jon D. Stewart, and L. Curtis Hannah PMCID: PMC2613723 A Second Mechanism for Aluminum Resistance in Wheat Relies on the Constitutive Efflux of Citrate from Roots Peter R. Ryan, Harsh Raman, Sanjay Gupta, Walter J. Horst, and Emmanuel Delhaize PMCID: PMC2613747 Genome-Wide Analysis of MIKCC-Type MADS Box Genes in Grapevine José Díaz-Riquelme, Diego Lijavetzky, José M. Martínez-Zapater, and María José Carmona PMCID: PMC2613716 Biosynthesis of t-Anethole in Anise: Characterization of t-Anol/Isoeugenol Synthase and an O-Methyltransferase Specific for a C7-C8 Propenyl Side Chain Takao Koeduka, Thomas J. Baiga, Joseph P. Noel, and Eran Pichersky PMCID: PMC2613694 A Relaxed Specificity in Interchain Disulfide Bond Formation Characterizes the Assembly of a Low-Molecular-Weight Glutenin Subunit in the Endoplasmic Reticulum Alessio Lombardi, Alessandra Barbante, Pietro Della Cristina, Daniele Rosiello, Chiara Lara Castellazzi, Luca Sbano, Stefania Masci, and Aldo Ceriotti PMCID: PMC2613710 Detection of Spatial-Specific Phytochrome Responses Using Targeted Expression of Biliverdin Reductase in Arabidopsis Sankalpi N. Warnasooriya and Beronda L. Montgomery PMCID: PMC2613748 The Arabidopsis A4 Subfamily of Lectin Receptor Kinases Negatively Regulates Abscisic Acid Response in Seed Germination Zeyu Xin, Anyou Wang, Guohua Yang, Peng Gao, and Zhi-Liang Zheng PMCID: PMC2613733 The Role of Plasma Membrane Intrinsic Protein Aquaporins in Water Transport through Roots: Diurnal and Drought Stress Responses Reveal Different Strategies between Isohydric and Anisohydric Cultivars of Grapevine Rebecca K. Vandeleur, Gwenda Mayo, Megan C. Shelden, Matthew Gilliham, Brent N. Kaiser, and Stephen D. Tyerman PMCID: PMC2613730 Rice Blast Fungus (Magnaporthe oryzae) Infects Arabidopsis via a Mechanism Distinct from That Required for the Infection of Rice Ju-Young Park, Jianming Jin, Yin-Won Lee, Seogchan Kang, and Yong-Hwan Lee PMCID: PMC2613700 Functional Characterization of a Higher Plant Sphingolipid Δ4-Desaturase: Defining the Role of Sphingosine and Sphingosine-1-Phosphate in Arabidopsis Louise V. Michaelson, Simone Zäuner, Jonathan E. Markham, Richard P. Haslam, Radhika Desikan, Sarah Mugford, Sandra Albrecht, Dirk Warnecke, Petra Sperling, E. Heinz, and Johnathan A. Napier PMCID: PMC2613699 Divergent Regulation of Terpenoid Metabolism in the Trichomes of Wild and Cultivated Tomato Species Katrin Besser, Andrea Harper, Nicholas Welsby, Ines Schauvinhold, Stephen Slocombe, Yi Li, Richard A. Dixon, and Pierre Broun PMCID: PMC2613740 The Genetic Basis of Constitutive and Herbivore-Induced ESP-Independent Nitrile Formation in Arabidopsis Meike Burow, Anja Losansky, René Müller, Antje Plock, Daniel J. Kliebenstein, and Ute Wittstock PMCID: PMC2613743 Hydraulic Failure Defines the Recovery and Point of Death in Water-Stressed Conifers Tim J. Brodribb and Hervé Cochard PMCID: PMC2613726 Differential Accumulation of Retroelements and Diversification of NB-LRR Disease Resistance Genes in Duplicated Regions following Polyploidy in the Ancestor of Soybean Roger W. Innes, Carine Ameline-Torregrosa, Tom Ashfield, Ethalinda Cannon, Steven B. Cannon, Ben Chacko, Nicolas W.G. Chen, Arnaud Couloux, Anita Dalwani, Roxanne Denny, Shweta Deshpande, Ashley N. Egan, Natasha Glover, Christian S. Hans, Stacy Howell, Dan Ilut, Scott Jackson, Hongshing Lai, Jafar Mammadov, Sara Martin del Campo, Michelle Metcalf, Ashley Nguyen, Majesta O'Bleness, Bernard E. Pfeil, Ram Podicheti, Milind B. Ratnaparkhe, Sylvie Samain, Iryna Sanders, Béatrice Ségurens, Mireille Sévignac, Sue Sherman-Broyles, Vincent Thareau, Dominic M. Tucker, Jason Walling, Adam Wawrzynski, Jing Yi, Jeff J. Doyle, Valérie Geffroy, Bruce A. Roe, M.A. Saghai Maroof, and Nevin D. Young PMCID: PMC2593655 Replication of Nonautonomous Retroelements in Soybean Appears to Be Both Recent and Common Adam Wawrzynski, Tom Ashfield, Nicolas W.G. Chen, Jafar Mammadov, Ashley Nguyen, Ram Podicheti, Steven B. Cannon, Vincent Thareau, Carine Ameline-Torregrosa, Ethalinda Cannon, Ben Chacko, Arnaud Couloux, Anita Dalwani, Roxanne Denny, Shweta Deshpande, Ashley N. Egan, Natasha Glover, Stacy Howell, Dan Ilut, Hongshing Lai, Sara Martin del Campo, Michelle Metcalf, Majesta O'Bleness, Bernard E. Pfeil, Milind B. Ratnaparkhe, Sylvie Samain, Iryna Sanders, Béatrice Ségurens, Mireille Sévignac, Sue Sherman-Broyles, Dominic M. Tucker, Jing Yi, Jeff J. Doyle, Valérie Geffroy, Bruce A. Roe, M.A. Saghai Maroof, Nevin D. Young, and Roger W. Innes PMCID: PMC2593652 Inhibition of 2-Oxoglutarate Dehydrogenase in Potato Tuber Suggests the Enzyme Is Limiting for Respiration and Confirms Its Importance in Nitrogen Assimilation Wagner L. Araújo, Adriano Nunes-Nesi, Sandra Trenkamp, Victoria I. Bunik, and Alisdair R. Fernie PMCID: PMC2593666 Identification and Characterization of ADNT1, a Novel Mitochondrial Adenine Nucleotide Transporter from Arabidopsis Luigi Palmieri, Antonella Santoro, Fernando Carrari, Emanuela Blanco, Adriano Nunes-Nesi, Roberto Arrigoni, Francesco Genchi, Alisdair R. Fernie, and Ferdinando Palmieri PMCID: PMC2593658 Novel Proteins, Putative Membrane Transporters, and an Integrated Metabolic Network Are Revealed by Quantitative Proteomic Analysis of Arabidopsis Cell Culture Peroxisomes Holger Eubel, Etienne H. Meyer, Nicolas L. Taylor, John D. Bussell, Nicholas O'Toole, Joshua L. Heazlewood, Ian Castleden, Ian D. Small, Steven M. Smith, and A. Harvey Millar PMCID: PMC2593673 Transcriptomic and Reverse Genetic Analysesof Branched-Chain Fatty Acid and Acyl Sugar Production in Solanum pennellii and Nicotiana benthamiana Stephen P. Slocombe, Ines Schauvinhold, Ryan P. McQuinn, Katrin Besser, Nicholas A. Welsby, Andrea Harper, Naveed Aziz, Yi Li, Tony R. Larson, James Giovannoni, Richard A. Dixon, and Pierre Broun PMCID: PMC2593661 The DEG15 Serine Protease Cleaves Peroxisomal Targeting Signal 2-Containing Proteins in Arabidopsis Holger Schuhmann, Pitter F. Huesgen, Christine Gietl, and Iwona Adamska PMCID: PMC2593680 Characterization of Cytokinin and Adenine Transport in Arabidopsis Cell Cultures Anna Cedzich, Harald Stransky, Burkhard Schulz, and Wolf B. Frommer PMCID: PMC2593678 Interaction of the WD40 Domain of a Myoinositol Polyphosphate 5-Phosphatase with SnRK1 Links Inositol, Sugar, and Stress Signaling Elitsa A. Ananieva, Glenda E. Gillaspy, Amanda Ely, Ryan N. Burnette, and F. Les Erickson PMCID: PMC2593651 The Arabidopsis Calcium Sensor Calcineurin B-Like 3 Inhibits the 5′-Methylthioadenosine Nucleosidase in a Calcium-Dependent Manner Seung-Ick Oh, Jimyeong Park, Sunhee Yoon, Yungyeong Kim, Soojin Park, Migyeong Ryu, Min Jung Nam, Sung Han Ok, Jeong-Kook Kim, Jeong-Sheop Shin, and Kyung-Nam Kim PMCID: PMC2593668 Arabidopsis Casein Kinase 1-Like 6 Contains a Microtubule-Binding Domain and Affects the Organization of Cortical Microtubules Gili Ben-Nissan, Weier Cui, Dong-Jin Kim, Yaodong Yang, Byung-Chun Yoo, and Jung-Youn Lee PMCID: PMC2593671 Unique and Overlapping Expression Patterns among Members of Photosynthesis-Associated Nuclear Gene Families in Arabidopsis Megan G. Sawchuk, Tyler J. Donner, Philip Head, and Enrico Scarpella PMCID: PMC2593682 Characterization of OsbZIP23 as a Key Player of the Basic Leucine Zipper Transcription Factor Family for Conferring Abscisic Acid Sensitivity and Salinity and Drought Tolerance in Rice Yong Xiang, Ning Tang, Hao Du, Haiyan Ye, and Lizhong Xiong PMCID: PMC2593664 Transcriptional Modulation of Ethylene Response Factor Protein JERF3 in the Oxidative Stress Response Enhances Tolerance of Tobacco Seedlings to Salt, Drought, and Freezing Lijun Wu, Zhijin Zhang, Haiwen Zhang, Xue-Chen Wang, and Rongfeng Huang PMCID: PMC2593663 Transcriptome Analysis of Proliferating Arabidopsis Endosperm Reveals Biological Implications for the Control of Syncytial Division, Cytokinin Signaling, and Gene Expression Regulation Robert C. Day, Rowan P. Herridge, Barbara A. Ambrose, and Richard C. Macknight PMCID: PMC2593665 Mechanism of Infection Thread Elongation in Root Hairs of Medicago truncatula and Dynamic Interplay with Associated Rhizobial Colonization Joëlle Fournier, Antonius C.J. Timmers, Björn J. Sieberer, Alain Jauneau, Mireille Chabaud, and David G. Barker PMCID: PMC2593660 Pseudomonas fluorescens WCS374r-Induced Systemic Resistance in Rice against Magnaporthe oryzae Is Based on Pseudobactin-Mediated Priming for a Salicylic Acid-Repressible Multifaceted Defense Response David De Vleesschauwer, Mohammad Djavaheri, Peter A.H.M. Bakker, and Monica Höfte PMCID: PMC2593667 Carbon Isotope Fractionation during Photorespiration and Carboxylation in Senecio Gary J. Lanigan, Nicholas Betson, Howard Griffiths, and Ulli Seibt PMCID: PMC2593675 Arabidopsis Transcriptome Reveals Control Circuits Regulating Redox Homeostasis and the Role of an AP2 Transcription Factor Abha Khandelwal, Thanura Elvitigala, Bijoy Ghosh, and Ralph S. Quatrano PMCID: PMC2593674 Arabidopsis CLP1-SIMILAR PROTEIN3, an Ortholog of Human Polyadenylation Factor CLP1, Functions in Gametophyte, Embryo, and Postembryonic Development Denghui Xing, Hongwei Zhao, and Qingshun Quinn Li PMCID: PMC2593670 The Chloroplast DnaJ Homolog CDJ1 of Chlamydomonas reinhardtii Is Part of a Multichaperone Complex Containing HSP70B, CGE1, and HSP90C Felix Willmund, Karolin V. Dorn, Miriam Schulz-Raffelt, and Michael Schroda PMCID: PMC2593681 A Novel 2-Oxoacid-Dependent Dioxygenase Involved in the Formation of the Goiterogenic 2-Hydroxybut-3-enyl Glucosinolate and Generalist Insect Resistance in Arabidopsis Bjarne G. Hansen, Rachel E. Kerwin, James A. Ober, Virginia M. Lambrix, Thomas Mitchell-Olds, Jonathan Gershenzon, Barbara A. Halkier, and Daniel J. Kliebenstein PMCID: PMC2593654 Bundle Sheath Leakiness and Light Limitation during C4 Leaf and Canopy CO2 Uptake Johannes Kromdijk, Hans E. Schepers, Fabrizio Albanito, Nuala Fitton, Faye Carroll, Michael B. Jones, John Finnan, Gary J. Lanigan, and Howard Griffiths PMCID: PMC2593657 The F-Box Gene Family Is Expanded in Herbaceous Annual Plants Relative to Woody Perennial Plants Xiaohan Yang, Udaya C. Kalluri, Sara Jawdy, Lee E. Gunter, Tongming Yin, Timothy J. Tschaplinski, David J. Weston, Priya Ranjan, and Gerald A. Tuskan PMCID: PMC2577272 Transcriptome Analyses Show Changes in Gene Expression to Accompany Pollen Germination and Tube Growth in Arabidopsis Yi Wang, Wen-Zheng Zhang, Lian-Fen Song, Jun-Jie Zou, Zhen Su, and Wei-Hua Wu PMCID: PMC2577266 Terpene Biosynthesis in Glandular Trichomes of Hop Guodong Wang, Li Tian, Naveed Aziz, Pierre Broun, Xinbin Dai, Ji He, Andrew King, Patrick X. Zhao, and Richard A. Dixon PMCID: PMC2577278 RNA Interference-Mediated Repression of MtCCD1 in Mycorrhizal Roots of Medicago truncatula Causes Accumulation of C27 Apocarotenoids, Shedding Light on the Functional Role of CCD1 Daniela S. Floss, Willibald Schliemann, Jürgen Schmidt, Dieter Strack, and Michael H. Walter PMCID: PMC2577242 MAP20, a Microtubule-Associated Protein in the Secondary Cell Walls of Hybrid Aspen, Is a Target of the Cellulose Synthesis Inhibitor 2,6-Dichlorobenzonitrile Alex S. Rajangam, Manoj Kumar, Henrik Aspeborg, Gea Guerriero, Lars Arvestad, Podjamas Pansri, Christian J.-L. Brown, Sophia Hober, Kristina Blomqvist, Christina Divne, Ines Ezcurra, Ewa Mellerowicz, Björn Sundberg, Vincent Bulone, and Tuula T. Teeri PMCID: PMC2577246 Catalytic Key Amino Acids and UDP-Sugar Donor Specificity of a Plant Glucuronosyltransferase, UGT94B1: Molecular Modeling Substantiated by Site-Specific Mutagenesis and Biochemical Analyses Sarah A. Osmani, Søren Bak, Anne Imberty, Carl Erik Olsen, and Birger Lindberg Møller PMCID: PMC2577238 Complex I Dysfunction Redirects Cellular and Mitochondrial Metabolism in Arabidopsis Marie Garmier, Adam J. Carroll, Etienne Delannoy, Corinne Vallet, David A. Day, Ian D. Small, and A. Harvey Millar PMCID: PMC2577250 Impact of PsbTc on Forward and Back Electron Flow, Assembly, and Phosphorylation Patterns of Photosystem II in Tobacco Pavan Umate, Christine Fellerer, Serena Schwenkert, Mikael Zoryan, Lutz A. Eichacker, Abbagani Sadanandam, Itzhak Ohad, Reinhold G. Herrmann, and Jörg Meurer PMCID: PMC2577276 Comparative Analyses of Arabidopsis complex glycan1 Mutants and Genetic Interaction with staurosporin and temperature sensitive3a Julia Frank, Heidi Kaulfürst-Soboll, Stephan Rips, Hisashi Koiwa, and Antje von Schaewen PMCID: PMC2577240 The Pollen Receptor Kinase LePRK2 Mediates Growth-Promoting Signals and Positively Regulates Pollen Germination and Tube Growth Dong Zhang, Diego Wengier, Bin Shuai, Cai-Ping Gui, Jorge Muschietti, Sheila McCormick, and Wei-Hua Tang PMCID: PMC2577252 The Mitochondrial Cycle of Arabidopsis Shoot Apical Meristem and Leaf Primordium Meristematic Cells Is Defined by a Perinuclear Tentaculate/Cage-Like Mitochondrion José M. Seguí-Simarro, María José Coronado, and L. Andrew Staehelin PMCID: PMC2577259 Physiological and Transcriptomic Evidence for a Close Coupling between Chloroplast Ontogeny and Cell Cycle Progression in the Pennate Diatom Seminavis robusta Jeroen Gillard, Valerie Devos, Marie J.J. Huysman, Lieven De Veylder, Sofie D'Hondt, Cindy Martens, Pieter Vanormelingen, Katrijn Vannerum, Koen Sabbe, Victor A. Chepurnov, Dirk Inzé, Marnik Vuylsteke, and Wim Vyverman PMCID: PMC2577256 AtCCX3 Is an Arabidopsis Endomembrane H+-Dependent K+ Transporter Jay Morris, Hui Tian, Sunghun Park, Coimbatore S. Sreevidya, John M. Ward, and Kendal D. Hirschi PMCID: PMC2577254 Functional Characterization of the Plastidic Phosphate Translocator Gene Family from the Thermo-Acidophilic Red Alga Galdieria sulphuraria Reveals Specific Adaptations of Primary Carbon Partitioning in Green Plants and Red Algae Marc Linka, Aziz Jamai, and Andreas P.M. Weber PMCID: PMC2577237 Powdery Mildew Resistance Conferred by Loss of the ENHANCED DISEASE RESISTANCE1 Protein Kinase Is Suppressed by a Missense Mutation in KEEP ON GOING, a Regulator of Abscisic Acid Signaling Anna Wawrzynska, Katy M. Christiansen, Yinan Lan, Natalie L. Rodibaugh, and Roger W. Innes PMCID: PMC2577273 Cell Wall-Bound Invertase Limits Sucrose Export and Is Involved in Symptom Development and Inhibition of Photosynthesis during Compatible Interaction between Tomato and Xanthomonas campestris pv vesicatoria Nurcan Kocal, Uwe Sonnewald, and Sophia Sonnewald PMCID: PMC2577280 Root-Secreted Malic Acid Recruits Beneficial Soil Bacteria Thimmaraju Rudrappa, Kirk J. Czymmek, Paul W. Paré, and Harsh P. Bais PMCID: PMC2577262 The Regulation of Cell Wall Extensibility during Shade Avoidance: A Study Using Two Contrasting Ecotypes of Stellaria longipes Rashmi Sasidharan, C.C. Chinnappa, Laurentius A.C.J. Voesenek, and Ronald Pierik PMCID: PMC2577261 β-Subunits of the SnRK1 Complexes Share a Common Ancestral Function Together with Expression and Function Specificities; Physical Interaction with Nitrate Reductase Specifically Occurs via AKINβ1-Subunit Cécile Polge, Mathieu Jossier, Pierre Crozet, Lionel Gissot, and Martine Thomas PMCID: PMC2577271 Transcriptional Profiling of Mature Arabidopsis Trichomes Reveals That NOECK Encodes the MIXTA-Like Transcriptional Regulator MYB106 Marc J. Jakoby, Doris Falkenhan, Michael T. Mader, Ginger Brininstool, Elisabeth Wischnitzki, Nicole Platz, Andrew Hudson, Martin Hülskamp, John Larkin, and Arp Schnittger PMCID: PMC2577251 A γ-Glutamyl Transpeptidase-Independent Pathway of Glutathione Catabolism to Glutamate via 5-Oxoproline in Arabidopsis Naoko Ohkama-Ohtsu, Akira Oikawa, Ping Zhao, Chengbin Xiang, Kazuki Saito, and David J. Oliver PMCID: PMC2577253 Decreased Expression of Cytosolic Pyruvate Kinase in Potato Tubers Leads to a Decline in Pyruvate Resulting in an in Vivo Repression of the Alternative Oxidase Sandra N. Oliver, John E. Lunn, Ewa Urbanczyk-Wochniak, Anna Lytovchenko, Joost T. van Dongen, Benjamin Faix, Elmar Schmälzlin, Alisdair R. Fernie, and Peter Geigenberger PMCID: PMC2577264 Acceleration of Flowering during Shade Avoidance in Arabidopsis Alters the Balance between FLOWERING LOCUS C-Mediated Repression and Photoperiodic Induction of Flowering Amanda C. Wollenberg, Bárbara Strasser, Pablo D. Cerdán, and Richard M. Amasino PMCID: PMC2577263 The AtrbohD-Mediated Oxidative Burst Elicited by Oligogalacturonides in Arabidopsis Is Dispensable for the Activation of Defense Responses Effective against Botrytis cinerea Roberta Galletti, Carine Denoux, Stefano Gambetta, Julia Dewdney, Frederick M. Ausubel, Giulia De Lorenzo, and Simone Ferrari PMCID: PMC2577270 Dynamics of Light and Nitrogen Distribution during Grain Filling within Wheat Canopy Jessica Bertheloot, Pierre Martre, and Bruno Andrieu PMCID: PMC2577274 Specific Gene Silencing by Artificial MicroRNAs in Physcomitrella patens: An Alternative to Targeted Gene Knockouts Basel Khraiwesh, Stephan Ossowski, Detlef Weigel, Ralf Reski, and Wolfgang Frank PMCID: PMC2556843 Metabolic Network Fluxes in Heterotrophic Arabidopsis Cells: Stability of the Flux Distribution under Different Oxygenation Conditions Thomas C.R. Williams, Laurent Miguet, Shyam K. Masakapalli, Nicholas J. Kruger, Lee J. Sweetlove, and R. George Ratcliffe PMCID: PMC2556809 Pyrrolizidine Alkaloid Biosynthesis in Phalaenopsis Orchids: Developmental Expression of Alkaloid-Specific Homospermidine Synthase in Root Tips and Young Flower Buds Sven Anke, Daniela Gondé, Elisabeth Kaltenegger, Robert Hänsch, Claudine Theuring, and Dietrich Ober PMCID: PMC2556837 Tomato γ-Glutamylhydrolases: Expression, Characterization, and Evidence for Heterodimer Formation Tariq A. Akhtar, Ryan P. McQuinn, Valeria Naponelli, Jesse F. Gregory, III, James J. Giovannoni, and Andrew D. Hanson PMCID: PMC2556829 Peroxisomal Malate Dehydrogenase Is Not Essential for Photorespiration in Arabidopsis But Its Absence Causes an Increase in the Stoichiometry of Photorespiratory CO2 Release Asaph B. Cousins, Itsara Pracharoenwattana, Wenxu Zhou, Steven M. Smith, and Murray R. Badger PMCID: PMC2556826 AtCHX13 Is a Plasma Membrane K+ Transporter Jian Zhao, Ning-Hui Cheng, Christy M. Motes, Elison B. Blancaflor, Miranda Moore, Naomi Gonzales, Senthilkumar Padmanaban, Heven Sze, John M. Ward, and Kendal D. Hirschi PMCID: PMC2556814 Abnormal Chloroplast Development and Growth Inhibition in Rice Thioredoxin m Knock-Down Plants Yong Hun Chi, Jeong Chan Moon, Jin Ho Park, Ho-Seung Kim, Ismayil S. Zulfugarov, Wahyu Indra Fanata, Ho Hee Jang, Jung Ro Lee, Young Mee Lee, Sun Tae Kim, Yong-Yoon Chung, Chae Oh Lim, Jae-Yean Kim, Dae-Jin Yun, Choon-Hwan Lee, Kyun Oh Lee, and Sang Yeol Lee PMCID: PMC2556838 Innate Immunity Signaling: Cytosolic Ca2+ Elevation Is Linked to Downstream Nitric Oxide Generation through the Action of Calmodulin or a Calmodulin-Like Protein Wei Ma, Andries Smigel, Yu-Chang Tsai, Janet Braam, and Gerald A. Berkowitz PMCID: PMC2556846 Chloroplast Outer Envelope Protein CHUP1 Is Essential for Chloroplast Anchorage to the Plasma Membrane and Chloroplast Movement Kazusato Oikawa, Akihiro Yamasato, Sam-Geun Kong, Masahiro Kasahara, Masato Nakai, Fumio Takahashi, Yasunobu Ogura, Takatoshi Kagawa, and Masamitsu Wada PMCID: PMC2556824 Rice ROOT ARCHITECTURE ASSOCIATED1 Binds the Proteasome Subunit RPT4 and Is Degraded in a D-Box and Proteasome-Dependent Manner Ye Han, Hong Cao, Jiafu Jiang, Yunyuan Xu, Jizhou Du, Xin Wang, Ming Yuan, Zhiyong Wang, Zhihong Xu, and Kang Chong PMCID: PMC2556835 AtPTR1 and AtPTR5 Transport Dipeptides in Planta Nataliya Y. Komarova, Kathrin Thor, Adrian Gubler, Stefan Meier, Daniela Dietrich, Annett Weichert, Marianne Suter Grotemeyer, Mechthild Tegeder, and Doris Rentsch PMCID: PMC2556804 Multiple MONOPTEROS-Dependent Pathways Are Involved in Leaf Initiation Mathias Schuetz, Thomas Berleth, and Jim Mattsson PMCID: PMC2556819 Rh-PIP2;1, a Rose Aquaporin Gene, Is Involved in Ethylene-Regulated Petal Expansion Nan Ma, Jingqi Xue, Yunhui Li, Xiaojing Liu, Fanwei Dai, Wensuo Jia, Yunbo Luo, and Junping Gao PMCID: PMC2556823 Dynamic Proteomic Analysis Reveals a Switch between Central Carbon Metabolism and Alcoholic Fermentation in Rice Filling Grains Sheng Bao Xu, Tang Li, Zhu Yun Deng, Kang Chong, Yongbiao Xue, and Tai Wang PMCID: PMC2556828 Genetic Variation for Lettuce Seed Thermoinhibition Is Associated with Temperature-Sensitive Expression of Abscisic Acid, Gibberellin, and Ethylene Biosynthesis, Metabolism, and Response Genes Jason Argyris, Peetambar Dahal, Eiji Hayashi, David W. Still, and Kent J. Bradford PMCID: PMC2556833 Two New Clock Proteins, LWD1 and LWD2, Regulate Arabidopsis Photoperiodic Flowering Jing-Fen Wu, Ying Wang, and Shu-Hsing Wu PMCID: PMC2556813 Amino Acid Polymorphisms in Strictly Conserved Domains of a P-Type ATPase HMA5 Are Involved in the Mechanism of Copper Tolerance Variation in Arabidopsis Yuriko Kobayashi, Keishi Kuroda, Keisuke Kimura, Jennafer L. Southron-Francis, Aya Furuzawa, Kazuhiko Kimura, Satoshi Iuchi, Masatomo Kobayashi, Gregory J. Taylor, and Hiroyuki Koyama PMCID: PMC2556842 Discrete and Essential Roles of the Multiple Domains of Arabidopsis FHY3 in Mediating Phytochrome A Signal Transduction Rongcheng Lin, Yibo Teng, Hee-Jin Park, Lei Ding, Christopher Black, Ping Fang, and Haiyang Wang PMCID: PMC2556831 Importance of Lineage-Specific Expansion of Plant Tandem Duplicates in the Adaptive Response to Environmental Stimuli Kousuke Hanada, Cheng Zou, Melissa D. Lehti-Shiu, Kazuo Shinozaki, and Shin-Han Shiu PMCID: PMC2556807 Involvement of the Pepper Antimicrobial Protein CaAMP1 Gene in Broad Spectrum Disease Resistance Sung Chul Lee, In Sun Hwang, Hyong Woo Choi, and Byung Kook Hwang PMCID: PMC2556820 UV-Induced DNA Damage Promotes Resistance to the Biotrophic Pathogen Hyaloperonospora parasitica in Arabidopsis Bernard A. Kunz, Paige K. Dando, Desma M. Grice, Peter G. Mohr, Peer M. Schenk, and David M. Cahill PMCID: PMC2556815 BAH1/NLA, a RING-Type Ubiquitin E3 Ligase, Regulates the Accumulation of Salicylic Acid and Immune Responses to Pseudomonas syringae DC3000 Takashi Yaeno and Koh Iba PMCID: PMC2556844 LEAFY COTYLEDON1 Is a Key Regulator of Fatty Acid Biosynthesis in Arabidopsis Jinye Mu, Helin Tan, Qi Zheng, Fuyou Fu, Yan Liang, Jian Zhang, Xiaohui Yang, Tai Wang, Kang Chong, Xiu-Jie Wang, and Jianru Zuo PMCID: PMC2556827 Mitochondrial Serine Acetyltransferase Functions as a Pacemaker of Cysteine Synthesis in Plant Cells Florian H. Haas, Corinna Heeg, Rafael Queiroz, Andrea Bauer, Markus Wirtz, and Rüdiger Hell PMCID: PMC2556817 Cytokinin Stimulates Chloroplast Transcription in Detached Barley Leaves Yan O. Zubo, Maria V. Yamburenko, Svetlana Y. Selivankina, Farida M. Shakirova, Azamat M. Avalbaev, Natalia V. Kudryakova, Natalia K. Zubkova, Karsten Liere, Olga N. Kulaeva, Victor V. Kusnetsov, and Thomas Börner PMCID: PMC2556816 Mitochondrial mRNA Polymorphisms in Different Arabidopsis Accessions Joachim Forner, Angela Hölzle, Christian Jonietz, Sabine Thuss, Markus Schwarzländer, Bärbel Weber, Rhonda C. Meyer, and Stefan Binder PMCID: PMC2556811 Independently Silencing Two Photosynthetic Proteins in Nicotiana attenuata Has Different Effects on Herbivore Resistance Sirsha Mitra and Ian T. Baldwin PMCID: PMC2556805 The Effect of Leaf-Level Spatial Variability in Photosynthetic Capacity on Biochemical Parameter Estimates Using the Farquhar Model: A Theoretical Analysis Charles P. Chen, Xin-Guang Zhu, and Stephen P. Long PMCID: PMC2556818 Root and Shoot Respiration of Perennial Ryegrass Are Supplied by the Same Substrate Pools: Assessment by Dynamic 13C Labeling and Compartmental Analysis of Tracer Kinetics Christoph Andreas Lehmeier, Fernando Alfredo Lattanzi, Rudi Schäufele, Melanie Wild, and Hans Schnyder PMCID: PMC2556832 Nitrate Control of Root Hydraulic Properties in Plants: Translating Local Information to Whole Plant Response Anna Gorska, Qing Ye, N. Michele Holbrook, and Maciej A. Zwieniecki PMCID: PMC2556825 Genome-Wide Analysis of Transposon Insertion Polymorphisms Reveals Intraspecific Variation in Cultivated Rice Xuehui Huang, Guojun Lu, Qiang Zhao, Xiaohui Liu, and Bin Han PMCID: PMC2528094 Geminivirus-Mediated Gene Silencing from Cotton Leaf Crumple Virus Is Enhanced by Low Temperature in Cotton John R. Tuttle, A.M. Idris, Judith K. Brown, Candace H. Haigler, and Dominique Robertson PMCID: PMC2528111 Expression of Umbelopsis ramanniana DGAT2A in Seed Increases Oil in Soybean Kathryn Lardizabal, Roger Effertz, Charlene Levering, Jennifer Mai, M.C. Pedroso, Tom Jury, Eric Aasen, Ken Gruys, and Kristen Bennett PMCID: PMC2528113 Identification of the Wax Ester Synthase/Acyl-Coenzyme A:Diacylglycerol Acyltransferase WSD1 Required for Stem Wax Ester Biosynthesis in Arabidopsis Fengling Li, Xuemin Wu, Patricia Lam, David Bird, Huanquan Zheng, Lacey Samuels, Reinhard Jetter, and Ljerka Kunst PMCID: PMC2528131 Citrus Chlorophyllase Dynamics at Ethylene-Induced Fruit Color-Break: A Study of Chlorophyllase Expression, Posttranslational Processing Kinetics, and in Situ Intracellular Localization Tamar Azoulay Shemer, Smadar Harpaz-Saad, Eduard Belausov, Nicole Lovat, Oleg Krokhin, Victor Spicer, Kenneth G. Standing, Eliezer E. Goldschmidt, and Yoram Eyal PMCID: PMC2528117 Functional Analysis of Arabidopsis Postprenylation CaaX Processing Enzymes and Their Function in Subcellular Protein Targeting Keren Bracha-Drori, Keren Shichrur, Tsofnat Cohen Lubetzky, and Shaul Yalovsky PMCID: PMC2528099 Novel Rhamnogalacturonan I and Arabinoxylan Polysaccharides of Flax Seed Mucilage Radnaa Naran, Guibing Chen, and Nicholas C. Carpita PMCID: PMC2528086 Mobilization of Rubisco and Stroma-Localized Fluorescent Proteins of Chloroplasts to the Vacuole by an ATG Gene-Dependent Autophagic Process Hiroyuki Ishida, Kohki Yoshimoto, Masanori Izumi, Daniel Reisen, Yuichi Yano, Amane Makino, Yoshinori Ohsumi, Maureen R. Hanson, and Tadahiko Mae PMCID: PMC2528122 Quantitative Proteomics of a Chloroplast SRP54 Sorting Mutant and Its Genetic Interactions with CLPC1 in Arabidopsis Heidi Rutschow, A. Jimmy Ytterberg, Giulia Friso, Robert Nilsson, and Klaas J. van Wijk PMCID: PMC2528104 Interactions of Two Transcriptional Repressors and Two Transcriptional Activators in Modulating Gibberellin Signaling in Aleurone Cells Xiaolu Zou, Dawn Neuman, and Qingxi J. Shen PMCID: PMC2528090 Immunolocalization of Solanaceous SUT1 Proteins in Companion Cells and Xylem Parenchyma: New Perspectives for Phloem Loading and Transport Bianca Schmitt, Ruth Stadler, and Norbert Sauer PMCID: PMC2528081 Functional Characterization of the Arabidopsis AtSUC2 Sucrose/H+ Symporter by Tissue-Specific Complementation Reveals an Essential Role in Phloem Loading But Not in Long-Distance Transport Avinash C. Srivastava, Savita Ganesan, Ihab O. Ismail, and Brian G. Ayre PMCID: PMC2528097 A Novel RNA-Binding Protein Associated with Cell Plate Formation Lian Ma, Bo Xie, Zonglie Hong, Desh Pal S. Verma, and Zhongming Zhang PMCID: PMC2528124 The Omp85-Related Chloroplast Outer Envelope Protein OEP80 Is Essential for Viability in Arabidopsis Ramesh Patel, Shih-Chi Hsu, Jocelyn Bédard, Kentaro Inoue, and Paul Jarvis PMCID: PMC2528115 In Planta Analysis of the Cell Cycle-Dependent Localization of AtCDC48A and Its Critical Roles in Cell Division, Expansion, and Differentiation Sookhee Park, David Michael Rancour, and Sebastian York Bednarek PMCID: PMC2528134 AGL61 Interacts with AGL80 and Is Required for Central Cell Development in Arabidopsis Joshua G. Steffen, Il-Ho Kang, Michael F. Portereiko, Alan Lloyd, and Gary N. Drews PMCID: PMC2528130 Regulation of CONSTANS and FLOWERING LOCUS T Expression in Response to Changing Light Quality Sang Yeol Kim, Xuhong Yu, and Scott D. Michaels PMCID: PMC2528114 Enhanced Tolerance to Oxidative Stress in Transgenic Arabidopsis Plants Expressing Proteins of Unknown Function Song Luhua, Sultan Ciftci-Yilmaz, Jeffery Harper, John Cushman, and Ron Mittler PMCID: PMC2528079 SENSITIVE TO FREEZING6 Integrates Cellular and Environmental Inputs to the Plant Circadian Clock Heather Knight, Adrian J.W. Thomson, and Harriet G. McWatters PMCID: PMC2528108 Overexpression of the Arabidopsis 10-Kilodalton Acyl-Coenzyme A-Binding Protein ACBP6 Enhances Freezing Tolerance Qin-Fang Chen, Shi Xiao, and Mee-Len Chye PMCID: PMC2528132 Regulation of Respiration and the Oxygen Diffusion Barrier in Soybean Protect Symbiotic Nitrogen Fixation from Chilling-Induced Inhibition and Shoots from Premature Senescence Philippus D.R. van Heerden, Guy Kiddle, Till K. Pellny, Phatlane W. Mokwala, Anine Jordaan, Abram J. Strauss, Misha de Beer, Urte Schlüter, Karl J. Kunert, and Christine H. Foyer PMCID: PMC2528118 Transfer of Plastid DNA to the Nucleus Is Elevated during Male Gametogenesis in Tobacco Anna E. Sheppard, Michael A. Ayliffe, Laura Blatch, Anil Day, Sven K. Delaney, Norfarhana Khairul-Fahmy, Yuan Li, Panagiotis Madesis, Anthony J. Pryor, and Jeremy N. Timmis PMCID: PMC2528088 A Novel ARID DNA-Binding Protein Interacts with SymRK and Is Expressed during Early Nodule Development in Lotus japonicus Hui Zhu, Tao Chen, Maosheng Zhu, Qing Fang, Heng Kang, Zonglie Hong, and Zhongming Zhang PMCID: PMC2528112 A Novel Role for Protein Farnesylation in Plant Innate Immunity Sandra Goritschnig, Tabea Weihmann, Yuelin Zhang, Pierre Fobert, Peter McCourt, and Xin Li PMCID: PMC2528093 Seven in Absentia Proteins Affect Plant Growth and Nodulation in Medicago truncatula Griet Den Herder, Annick De Keyser, Riet De Rycke, Stephane Rombauts, Willem Van de Velde, María R. Clemente, Christa Verplancke, Peter Mergaert, Eva Kondorosi, Marcelle Holsters, and Sofie Goormachtig PMCID: PMC2528092 A Role for a Menthone Reductase in Resistance against Microbial Pathogens in Plants Hyong Woo Choi, Byung Gil Lee, Nak Hyun Kim, Yong Park, Chae Woo Lim, Hyun Kyu Song, and Byung Kook Hwang PMCID: PMC2528125 A Novel Type of Thioredoxin Dedicated to Symbiosis in Legumes Fatima Alkhalfioui, Michelle Renard, Pierre Frendo, Corinne Keichinger, Yves Meyer, Eric Gelhaye, Masakazu Hirasawa, David B. Knaff, Christophe Ritzenthaler, and Françoise Montrichard PMCID: PMC2528116 Global Analysis of Arabidopsis Gene Expression Uncovers a Complex Array of Changes Impacting Pathogen Response and Cell Cycle during Geminivirus Infection José Trinidad Ascencio-Ibáñez, Rosangela Sozzani, Tae-Jin Lee, Tzu-Ming Chu, Russell D. Wolfinger, Rino Cella, and Linda Hanley-Bowdoin PMCID: PMC2528102 Manganese Efficiency in Barley: Identification and Characterization of the Metal Ion Transporter HvIRT1 Pai Pedas, Cecilie K. Ytting, Anja T. Fuglsang, Thomas P. Jahn, Jan K. Schjoerring, and Søren Husted PMCID: PMC2528110 Integration of Carbon and Nitrogen Metabolism with Energy Production Is Crucial to Light Acclimation in the Cyanobacterium Synechocystis Abhay K. Singh, Thanura Elvitigala, Maitrayee Bhattacharyya-Pakrasi, Rajeev Aurora, Bijoy Ghosh, and Himadri B. Pakrasi PMCID: PMC2528105 Eukaryotic Translation Initiation Factor 5A Is Involved in Pathogen-Induced Cell Death and Development of Disease Symptoms in Arabidopsis Marianne T. Hopkins, Yulia Lampi, Tzann-Wei Wang, Zhongda Liu, and John E. Thompson PMCID: PMC2528091 Redundant Requirement for a Pair of PROTEIN ARGININE METHYLTRANSFERASE4 Homologs for the Proper Regulation of Arabidopsis Flowering Time Lifang Niu, Yong Zhang, Yanxi Pei, Chunyan Liu, and Xiaofeng Cao PMCID: PMC2528109 In-Depth Investigation of the Soybean Seed-Filling Proteome and Comparison with a Parallel Study of Rapeseed Ganesh Kumar Agrawal, Martin Hajduch, Katherine Graham, and Jay J. Thelen PMCID: PMC2528123 The Binding of Auxin to the Arabidopsis Auxin Influx Transporter AUX1 David J. Carrier, Norliza Tendot Abu Bakar, Ranjan Swarup, Richard Callaghan, Richard M. Napier, Malcolm J. Bennett, and Ian D. Kerr PMCID: PMC2528085 Functional Characterization of an Unusual Phytochelatin Synthase, LjPCS3, of Lotus japonicus Javier Ramos, Loreto Naya, Marina Gay, Joaquín Abián, and Manuel Becana PMCID: PMC2528106 Cool C4 Photosynthesis: Pyruvate Pi Dikinase Expression and Activity Corresponds to the Exceptional Cold Tolerance of Carbon Assimilation in Miscanthus × giganteus Dafu Wang, Archie R. Portis, Jr., Stephen P. Moose, and Stephen P. Long PMCID: PMC2528129 Comparative Proteomics of Chloroplast Envelopes from C3 and C4 Plants Reveals Specific Adaptations of the Plastid Envelope to C4 Photosynthesis and Candidate Proteins Required for Maintaining C4 Metabolite Fluxes Andrea Bräutigam, Susanne Hoffmann-Benning, and Andreas P.M. Weber PMCID: PMC2528119 Monogalactosyldiacylglycerol Deficiency in Arabidopsis Affects Pigment Composition in the Prolamellar Body and Impairs Thylakoid Membrane Energization and Photoprotection in Leaves Henrik Aronsson, Mark A. Schöttler, Amélie A. Kelly, Christer Sundqvist, Peter Dörmann, Sazzad Karim, and Paul Jarvis PMCID: PMC2528128 Leaf Development in the Single-Cell C4 System in Bienertia sinuspersici: Expression of Genes and Peptide Levels for C4 Metabolism in Relation to Chlorenchyma Structure under Different Light Conditions María Valeria Lara, Sascha Offermann, Monica Smith, Thomas W. Okita, Carlos Santiago Andreo, and Gerald E. Edwards PMCID: PMC2528127 Proteome-Wide Characterization of Seed Aging in Arabidopsis: A Comparison between Artificial and Natural Aging Protocols Loïc Rajjou, Yoann Lovigny, Steven P.C. Groot, Maya Belghazi, Claudette Job, and Dominique Job PMCID: PMC2528126 Conifers, Angiosperm Trees, and Lianas: Growth, Whole-Plant Water and Nitrogen Use Efficiency, and Stable Isotope Composition (δ13C and δ18O) of Seedlings Grown in a Tropical Environment Lucas A. Cernusak, Klaus Winter, Jorge Aranda, and Benjamin L. Turner PMCID: PMC2528101 Comparison of the Dynamics and Functional Redundancy of the Arabidopsis Dynamin-Related Isoforms DRP1A and DRP1C during Plant Development Catherine A. Konopka and Sebastian Y. Bednarek PMCID: PMC2492646 An Actin-Binding Protein, LlLIM1, Mediates Calcium and Hydrogen Regulation of Actin Dynamics in Pollen Tubes Huei-Jing Wang, Ai-Ru Wan, and Guang-Yuh Jauh PMCID: PMC2492651 SCAMPs Highlight the Developing Cell Plate during Cytokinesis in Tobacco BY-2 Cells Sheung Kwan Lam, Yi Cai, Stefan Hillmer, David G. Robinson, and Liwen Jiang PMCID: PMC2492649 Magnitude and Direction of Vesicle Dynamics in Growing Pollen Tubes Using Spatiotemporal Image Correlation Spectroscopy and Fluorescence Recovery after Photobleaching Jérôme Bove, Benoit Vaillancourt, Jens Kroeger, Peter K. Hepler, Paul W. Wiseman, and Anja Geitmann PMCID: PMC2492615 A Class I ADP-Ribosylation Factor GTPase-Activating Protein Is Critical for Maintaining Directional Root Hair Growth in Arabidopsis Cheol-Min Yoo, Jiangqi Wen, Christy M. Motes, J. Alan Sparks, and Elison B. Blancaflor PMCID: PMC2492602 A Distinct Endosomal Ca2+/Mn2+ Pump Affects Root Growth through the Secretory Process Xiyan Li, Salil Chanroj, Zhongyi Wu, Shawn M. Romanowsky, Jeffrey F. Harper, and Heven Sze PMCID: PMC2492598 Imaging of the Yellow Cameleon 3.6 Indicator Reveals That Elevations in Cytosolic Ca2+ Follow Oscillating Increases in Growth in Root Hairs of Arabidopsis Gabriele B. Monshausen, Mark A. Messerli, and Simon Gilroy PMCID: PMC2492656 Synthetic Lipid (DOPG) Vesicles Accumulate in the Cell Plate Region But Do Not Fuse Agnieszka Esseling-Ozdoba, Jan W. Vos, André A.M. van Lammeren, and Anne Mie C. Emons PMCID: PMC2492608 An Abscisic Acid-Induced Protein, HVA22, Inhibits Gibberellin-Mediated Programmed Cell Death in Cereal Aleurone Cells Woei-Jiun Guo and Tuan-Hua David Ho PMCID: PMC2492636 Genetic Evidence That Cellulose Synthase Activity Influences Microtubule Cortical Array Organization Alexander R. Paredez, Staffan Persson, David W. Ehrhardt, and Chris R. Somerville PMCID: PMC2492609 Tracking Monolignols during Wood Development in Lodgepole Pine Minako Kaneda, Kim H. Rensing, John C.T. Wong, Brian Banno, Shawn D. Mansfield, and A. Lacey Samuels PMCID: PMC2492623 Comparative Analysis of Divergent and Convergent Gene Pairs and Their Expression Patterns in Rice, Arabidopsis, and Populus Nicholas Krom and Wusirika Ramakrishna PMCID: PMC2492640 Imaging Nutrient Distributions in Plant Tissue Using Time-of-Flight Secondary Ion Mass Spectrometry and Scanning Electron Microscopy Ralf Metzner, Heike Ursula Schneider, Uwe Breuer, and Walter Heinz Schroeder PMCID: PMC2492657 A Community-Based Annotation Framework for Linking Solanaceae Genomes with Phenomes Naama Menda, Robert M. Buels, Isaak Tecle, and Lukas A. Mueller PMCID: PMC2492603 The Role of Acetyl-Coenzyme A Synthetase in Arabidopsis Ming Lin and David J. Oliver PMCID: PMC2492652 Bridging the Gap between Plant and Mammalian Polyamine Catabolism: A Novel Peroxisomal Polyamine Oxidase Responsible for a Full Back-Conversion Pathway in Arabidopsis Panagiotis N. Moschou, Maite Sanmartin, Athina H. Andriopoulou, Enrique Rojo, Jose J. Sanchez-Serrano, and Kalliopi A. Roubelakis-Angelakis PMCID: PMC2492618 Identification of Regulatory Pathways Controlling Gene Expression of Stress-Responsive Mitochondrial Proteins in Arabidopsis Lois H.M. Ho, Estelle Giraud, Vindya Uggalla, Ryan Lister, Rachel Clifton, Angela Glen, Dave Thirkettle-Watts, Olivier Van Aken, and James Whelan PMCID: PMC2492625 The Arabidopsis Phosphatidylinositol 3-Kinase Is Important for Pollen Development Yuree Lee, Eun-Sook Kim, Yunjung Choi, Inwhan Hwang, Christopher J. Staiger, Yong-Yoon Chung, and Youngsook Lee PMCID: PMC2492648 The Relationship between Auxin Transport and Maize Branching Andrea Gallavotti, Yan Yang, Robert J. Schmidt, and David Jackson PMCID: PMC2492655 Arginase-Negative Mutants of Arabidopsis Exhibit Increased Nitric Oxide Signaling in Root Development Teresita Flores, Christopher D. Todd, Alejandro Tovar-Mendez, Preetinder K. Dhanoa, Natalia Correa-Aragunde, Mary Elizabeth Hoyos, Disa M. Brownfield, Robert T. Mullen, Lorenzo Lamattina, and Joe C. Polacco PMCID: PMC2492630 Mutation of the Rice Narrow leaf1 Gene, Which Encodes a Novel Protein, Affects Vein Patterning and Polar Auxin Transport Jing Qi, Qian Qian, Qingyun Bu, Shuyu Li, Qian Chen, Jiaqiang Sun, Wenxing Liang, Yihua Zhou, Chengcai Chu, Xugang Li, Fugang Ren, Klaus Palme, Bingran Zhao, Jinfeng Chen, Mingsheng Chen, and Chuanyou Li PMCID: PMC2492643 Developmental Role and Auxin Responsiveness of Class III Homeodomain Leucine Zipper Gene Family Members in Rice Jun-Ichi Itoh, Ken-Ichiro Hibara, Yutaka Sato, and Yasuo Nagato PMCID: PMC2492597 Selectable Tolerance to Herbicides by Mutated Acetolactate Synthase Genes Integrated into the Chloroplast Genome of Tobacco Masanori Shimizu, Maki Goto, Moeko Hanai, Tsutomu Shimizu, Norihiko Izawa, Hirosuke Kanamoto, Ken-Ichi Tomizawa, Akiho Yokota, and Hirokazu Kobayashi PMCID: PMC2492613 Drought Induction of Arabidopsis 9-cis-Epoxycarotenoid Dioxygenase Occurs in Vascular Parenchyma Cells Akira Endo, Yoshiaki Sawada, Hirokazu Takahashi, Masanori Okamoto, Keiichi Ikegami, Hanae Koiwai, Mitsunori Seo, Tomonobu Toyomasu, Wataru Mitsuhashi, Kazuo Shinozaki, Mikio Nakazono, Yuji Kamiya, Tomokazu Koshiba, and Eiji Nambara PMCID: PMC2492653 Investigation of Heavy Metal Hyperaccumulation at the Cellular Level: Development and Characterization of Thlaspi caerulescens Suspension Cell Lines Melinda A. Klein, Hitoshi Sekimoto, Matthew J. Milner, and Leon V. Kochian PMCID: PMC2492644 Glycerol-3-Phosphate Levels Are Associated with Basal Resistance to the Hemibiotrophic Fungus Colletotrichum higginsianum in Arabidopsis Bidisha Chanda, Srivathsa C. Venugopal, Saurabh Kulshrestha, Duroy A. Navarre, Bruce Downie, Lisa Vaillancourt, Aardra Kachroo, and Pradeep Kachroo PMCID: PMC2492641 Involvement of the MADS-Box Gene ZMM4 in Floral Induction and Inflorescence Development in Maize Olga N. Danilevskaya, Xin Meng, David A. Selinger, Stéphane Deschamps, Pedro Hermon, Gordon Vansant, Rajeev Gupta, Evgueni V. Ananiev, and Michael G. Muszynski PMCID: PMC2492622 Histone Modifications and Expression of Light-Regulated Genes in Arabidopsis Are Cooperatively Influenced by Changing Light Conditions Lan Guo, Junli Zhou, Axel A. Elling, Jean-Benoit F. Charron, and Xing Wang Deng PMCID: PMC2492627 Interactions between the S-Domain Receptor Kinases and AtPUB-ARM E3 Ubiquitin Ligases Suggest a Conserved Signaling Pathway in Arabidopsis Marcus A. Samuel, Yashwanti Mudgil, Jennifer N. Salt, Frédéric Delmas, Shaliny Ramachandran, Andrea Chilelli, and Daphne R. Goring PMCID: PMC2492606 Silencing Onion Lachrymatory Factor Synthase Causes a Significant Change in the Sulfur Secondary Metabolite Profile Colin C. Eady, Takahiro Kamoi, Masahiro Kato, Noel G. Porter, Sheree Davis, Martin Shaw, Akiko Kamoi, and Shinsuke Imai PMCID: PMC2492635 Metabolome Analysis of Biosynthetic Mutants Reveals a Diversity of Metabolic Changes and Allows Identification of a Large Number of New Compounds in Arabidopsis Christoph Böttcher, Edda von Roepenack-Lahaye, Jürgen Schmidt, Constanze Schmotz, Steffen Neumann, Dierk Scheel, and Stephan Clemens PMCID: PMC2492617 The Transport of Sugars to Developing Embryos Is Not via the Bulk Endosperm in Oilseed Rape Seeds Edward R. Morley-Smith, Marilyn J. Pike, Kim Findlay, Walter Köckenberger, Lionel M. Hill, Alison M. Smith, and Stephen Rawsthorne PMCID: PMC2492605 Novel Properties of the Wheat Aluminum Tolerance Organic Acid Transporter (TaALMT1) Revealed by Electrophysiological Characterization in Xenopus Oocytes: Functional and Structural Implications Miguel A. Piñeros, Geraldo M.A. Cançado, and Leon V. Kochian PMCID: PMC2492633 Multiple Models for Rosaceae Genomics Vladimir Shulaev, Schuyler S. Korban, Bryon Sosinski, Albert G. Abbott, Herb S. Aldwinckle, Kevin M. Folta, Amy Iezzoni, Dorrie Main, Pere Arús, Abhaya M. Dandekar, Kim Lewers, Susan K. Brown, Thomas M. Davis, Susan E. Gardiner, Daniel Potter, and Richard E. Veilleux PMCID: PMC2442536 CressExpress: A Tool For Large-Scale Mining of Expression Data from Arabidopsis Vinodh Srinivasasainagendra, Grier P. Page, Tapan Mehta, Issa Coulibaly, and Ann E. Loraine PMCID: PMC2442548 Biochemical and Genomic Characterization of Terpene Synthases in Magnolia grandiflora Sungbeom Lee and Joseph Chappell PMCID: PMC2442544 Inactive Methyl Indole-3-Acetic Acid Ester Can Be Hydrolyzed and Activated by Several Esterases Belonging to the AtMES Esterase Family of Arabidopsis Yue Yang, Richard Xu, Choong-je Ma, A. Corina Vlot, Daniel F. Klessig, and Eran Pichersky PMCID: PMC2442527 Functional Analysis of a Predicted Flavonol Synthase Gene Family in Arabidopsis Daniel K. Owens, Anne B. Alerding, Kevin C. Crosby, Aloka B. Bandara, James H. Westwood, and Brenda S.J. Winkel PMCID: PMC2442520 The Potato-Specific Apyrase Is Apoplastically Localized and Has Influence on Gene Expression, Growth, and Development David Riewe, Lukasz Grosman, Alisdair R. Fernie, Cornelia Wucke, and Peter Geigenberger PMCID: PMC2442552 Circadian Timekeeping during Early Arabidopsis Development Patrice A. Salomé, Qiguang Xie, and C. Robertson McClung PMCID: PMC2442538 Global Identification of DELLA Target Genes during Arabidopsis Flower Development Xingliang Hou, Wen-Wei Hu, Lisha Shen, Li Yen Candy Lee, Zhen Tao, Jin-Hua Han, and Hao Yu PMCID: PMC2442519 The Arabidopsis BRAHMA Chromatin-Remodeling ATPase Is Involved in Repression of Seed Maturation Genes in Leaves Xurong Tang, Anfu Hou, Mohan Babu, Vi Nguyen, Lidia Hurtado, Qing Lu, Jose C. Reyes, Aiming Wang, Wilfred A. Keller, John J. Harada, Edward W.T. Tsang, and Yuhai Cui PMCID: PMC2442534 The Arabidopsis Halophytic Relative Thellungiella halophila Tolerates Nitrogen-Limiting Conditions by Maintaining Growth, Nitrogen Uptake, and Assimilation Surya Kant, Yong-Mei Bi, Elizabeth Weretilnyk, Simon Barak, and Steven J. Rothstein PMCID: PMC2442522 The Effect of Iron on the Primary Root Elongation of Arabidopsis during Phosphate Deficiency James T. Ward, Brett Lahner, Elena Yakubova, David E. Salt, and Kashchandra G. Raghothama PMCID: PMC2442553 Engineering a Catabolic Pathway in Plants for the Degradation of 1,2-Dichloroethane Gilda L. Mena-Benitez, Fernando Gandia-Herrero, Stuart Graham, Tony R. Larson, Simon J. McQueen-Mason, Christopher E. French, Elizabeth L. Rylott, and Neil C. Bruce PMCID: PMC2442539 Involvement of CBF Transcription Factors in Winter Hardiness in Birch Annikki Welling and E. Tapio Palva PMCID: PMC2442524 RNA-Directed RNA Polymerase3 from Nicotiana attenuata Is Required for Competitive Growth in Natural Environments Shree P. Pandey, Emmanuel Gaquerel, Klaus Gase, and Ian T. Baldwin PMCID: PMC2442529 The High Light-Inducible Polypeptides Stabilize Trimeric Photosystem I Complex under High Light Conditions in Synechocystis PCC 6803 Qiang Wang, Saowarath Jantaro, Bingshe Lu, Waqar Majeed, Marian Bailey, and Qingfang He PMCID: PMC2442545 Galactinol and Raffinose Constitute a Novel Function to Protect Plants from Oxidative Damage Ayako Nishizawa, Yukinori Yabuta, and Shigeru Shigeoka PMCID: PMC2442551 Characterization and Biological Function of the ISOCHORISMATE SYNTHASE2 Gene of Arabidopsis Christophe Garcion, Antje Lohmann, Elisabeth Lamodière, Jérémy Catinot, Antony Buchala, Peter Doermann, and Jean-Pierre Métraux PMCID: PMC2442540 RNA Interference-Mediated Repression of Cell Wall Invertase Impairs Defense in Source Leaves of Tobacco Jutta Essmann, Ina Schmitz-Thom, Hardy Schön, Sophia Sonnewald, Engelbert Weis, and Judith Scharte PMCID: PMC2442523 The “Old” Euonymus europaeus Agglutinin Represents a Novel Family of Ubiquitous Plant Proteins Elke Fouquaert, Willy J. Peumans, David F. Smith, Paul Proost, Savvas N. Savvides, and Els J.M. Van Damme PMCID: PMC2442556 An Oleate Hydroxylase from the Fungus Claviceps purpurea: Cloning, Functional Analysis, and Expression in Arabidopsis Dauenpen Meesapyodsuk and Xiao Qiu PMCID: PMC2442535 The Maize Phytoene Synthase Gene Family: Overlapping Roles for Carotenogenesis in Endosperm, Photomorphogenesis, and Thermal Stress Tolerance Faqiang Li, Ratnakar Vallabhaneni, Jane Yu, Torbert Rocheford, and Eleanore T. Wurtzel PMCID: PMC2442542 Kinetics of Salicylate-Mediated Suppression of Jasmonate Signaling Reveal a Role for Redox Modulation Annemart Koornneef, Antonio Leon-Reyes, Tita Ritsema, Adriaan Verhage, Floor C. Den Otter, L.C. Van Loon, and Corné M.J. Pieterse PMCID: PMC2442557 Auxin Responses in Mutants of the Arabidopsis CONSTITUTIVE PHOTOMORPHOGENIC9 Signalosome Esther Mirjam Natascha Dohmann, Mitchell Paul Levesque, Erika Isono, Markus Schmid, and Claus Schwechheimer PMCID: PMC2442533 Sequence Analysis of Bacterial Artificial Chromosome Clones from the Apospory-Specific Genomic Region of Pennisetum and Cenchrus Joann A. Conner, Shailendra Goel, Gunawati Gunawan, Marie-Michele Cordonnier-Pratt, Virgil Ed Johnson, Chun Liang, Haiming Wang, Lee H. Pratt, John E. Mullet, Jeremy DeBarry, Lixing Yang, Jeffrey L. Bennetzen, Patricia E. Klein, and Peggy Ozias-Akins PMCID: PMC2442526 A Genome-Wide Functional Investigation into the Roles of Receptor-Like Proteins in Arabidopsis Guodong Wang, Ursula Ellendorff, Ben Kemp, John W. Mansfield, Alec Forsyth, Kathy Mitchell, Kubilay Bastas, Chun-Ming Liu, Alison Woods-Tör, Cyril Zipfel, Pierre J.G.M. de Wit, Jonathan D.G. Jones, Mahmut Tör, and Bart P.H.J. Thomma PMCID: PMC2409048 Three-Dimensional Gas Exchange Pathways in Pome Fruit Characterized by Synchrotron X-Ray Computed Tomography Pieter Verboven, Greet Kerckhofs, Hibru Kelemu Mebatsion, Quang Tri Ho, Kristiaan Temst, Martine Wevers, Peter Cloetens, and Bart M. Nicolaï PMCID: PMC2409043 Functional Identification of Arabidopsis Stress Regulatory Genes Using the Controlled cDNA Overexpression System Csaba Papdi, Edit Ábrahám, Mary Prathiba Joseph, Cristina Popescu, Csaba Koncz, and László Szabados PMCID: PMC2409023 Overexpression of Poplar Cellulase Accelerates Growth and Disturbs the Closing Movements of Leaves in Sengon Sri Hartati, Enny Sudarmonowati, Yong Woo Park, Tomomi Kaku, Rumi Kaida, Kei'ichi Baba, and Takahisa Hayashi PMCID: PMC2409039 The Pentratricopeptide Repeat Protein DELAYED GREENING1 Is Involved in the Regulation of Early Chloroplast Development and Chloroplast Gene Expression in Arabidopsis Wei Chi, Jinfang Ma, Dongyuan Zhang, Jinkui Guo, Fan Chen, Congming Lu, and Lixin Zhang PMCID: PMC2409026 Reduction of Plastid-Localized Carbonic Anhydrase Activity Results in Reduced Arabidopsis Seedling Survivorship Fernando J. Ferreira, Cathy Guo, and John R. Coleman PMCID: PMC2409021 The Absence of ALTERNATIVE OXIDASE1a in Arabidopsis Results in Acute Sensitivity to Combined Light and Drought Stress Estelle Giraud, Lois H.M. Ho, Rachel Clifton, Adam Carroll, Gonzalo Estavillo, Yew-Foon Tan, Katharine A. Howell, Aneta Ivanova, Barry J. Pogson, A. Harvey Millar, and James Whelan PMCID: PMC2409015 Roles of Phosphatidylinositol 3-Kinase in Root Hair Growth Yuree Lee, Gwangbae Bak, Yunjung Choi, Wen-I Chuang, Hyung-Taeg Cho, and Youngsook Lee PMCID: PMC2409009 Gγ1 + Gγ2 ≠ Gβ: Heterotrimeric G Protein Gγ-Deficient Mutants Do Not Recapitulate All Phenotypes of Gβ-Deficient Mutants Yuri Trusov, Wei Zhang, Sarah M. Assmann, and José Ramón Botella PMCID: PMC2409028 PHYTOCHROME KINASE SUBSTRATE4 Modulates Phytochrome-Mediated Control of Hypocotyl Growth Orientation Isabelle Schepens, Hernán E. Boccalandro, Chitose Kami, Jorge J. Casal, and Christian Fankhauser PMCID: PMC2409036 LEUNIG_HOMOLOG and LEUNIG Perform Partially Redundant Functions during Arabidopsis Embryo and Floral Development Jayashree Sitaraman, Minh Bui, and Zhongchi Liu PMCID: PMC2409011 Functional Redundancy and New Roles for Genes of the Autonomous Floral-Promotion Pathway Kira M. Veley and Scott D. Michaels PMCID: PMC2409018 Two GATA Transcription Factors Are Downstream Effectors of Floral Homeotic Gene Action in Arabidopsis Chloe D. Mara and Vivian F. Irish PMCID: PMC2409029 AtOSA1, a Member of the Abc1-Like Family, as a New Factor in Cadmium and Oxidative Stress Response Michal Jasinski, Damien Sudre, Gert Schansker, Maya Schellenberg, Signarbieux Constant, Enrico Martinoia, and Lucien Bovet PMCID: PMC2409006 Regulatory Network of MicroRNA399 and PHO2 by Systemic Signaling Shu-I Lin, Su-Fen Chiang, Wei-Yi Lin, June-Wei Chen, Ching-Ying Tseng, Pei-Chi Wu, and Tzyy-Jen Chiou PMCID: PMC2409027 Evidence for Abscisic Acid Biosynthesis in Cuscuta reflexa, a Parasitic Plant Lacking Neoxanthin Xiaoqiong Qin, Seung Hwan Yang, Andrea C. Kepsel, Steven H. Schwartz, and Jan A.D. Zeevaart PMCID: PMC2409030 RUPTURED POLLEN GRAIN1, a Member of the MtN3/saliva Gene Family, Is Crucial for Exine Pattern Formation and Cell Integrity of Microspores in Arabidopsis Yue-Feng Guan, Xue-Yong Huang, Jun Zhu, Ju-Fang Gao, Hong-Xia Zhang, and Zhong-Nan Yang PMCID: PMC2409014 Differential Regulation of the Expression of Two High-Affinity Sulfate Transporters, SULTR1.1 and SULTR1.2, in Arabidopsis Hatem Rouached, Markus Wirtz, Remi Alary, Rüdiger Hell, A. Bulak Arpat, Jean-Claude Davidian, Pierre Fourcroy, and Pierre Berthomieu PMCID: PMC2409035 A Diurnal Component to the Variation in Sieve Tube Amino Acid Content in Wheat Stefano Gattolin, H. John Newbury, Jeffrey S. Bale, Hua-Ming Tseng, David A. Barrett, and Jeremy Pritchard PMCID: PMC2409022 The Stomata of the Fern Adiantum capillus-veneris Do Not Respond to CO2 in the Dark and Open by Photosynthesis in Guard Cells Michio Doi and Ken-ichiro Shimazaki PMCID: PMC2409034 |
