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Volume 13(5);  May 2007
Review
Cis-acting determinants of asymmetric, cytoplasmic RNA transport
Ashwini Jambhekar and Joseph L. DeRisi
RNA. 2007 May; 13(5): 625–642. doi: 10.1261/rna.262607.
PMCID: PMC1852811
Bioinformatics
Coplanar and coaxial orientations of RNA bases and helices
Alain Laederach, Joseph M. Chan, Armin Schwartzman, Eric Willgohs, and Russ B. Altman
RNA. 2007 May; 13(5): 643–650. doi: 10.1261/rna.381407.
PMCID: PMC1852812
Anticodon-dependent conservation of bacterial tRNA gene sequences
Margaret E. Saks and John S. Conery
RNA. 2007 May; 13(5): 651–660. doi: 10.1261/rna.345907.
PMCID: PMC1852809
Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomes
Alexander V. Alekseyenko, Namshin Kim, and Christopher J. Lee
RNA. 2007 May; 13(5): 661–670. doi: 10.1261/rna.325107.
PMCID: PMC1852814
In silico screening of archaeal tRNA-encoding genes having multiple introns with bulge-helix-bulge splicing motifs
Junichi Sugahara, Nozomu Yachie, Kazuharu Arakawa, and Masaru Tomita
RNA. 2007 May; 13(5): 671–681. doi: 10.1261/rna.309507.
PMCID: PMC1852824
Reports
A noncoding RNA in Saccharomyces cerevisiae is an RNase P substrate
Li Yang and Sidney Altman
RNA. 2007 May; 13(5): 682–690. doi: 10.1261/rna.460607.
PMCID: PMC1852816
Weak binding affinity of human 4EHP for mRNA cap analogs
Joanna Zuberek, Dorota Kubacka, Agnieszka Jablonowska, Jacek Jemielity, Janusz Stepinski, Nahum Sonenberg, and Edward Darzynkiewicz
RNA. 2007 May; 13(5): 691–697. doi: 10.1261/rna.453107.
PMCID: PMC1852817
Editing modifies the GABAA receptor subunit α3
Johan Ohlson, Jakob Skou Pedersen, David Haussler, and Marie Öhman
RNA. 2007 May; 13(5): 698–703. doi: 10.1261/rna.349107.
PMCID: PMC1852825
Probing the mRNA processing body using protein macroarrays and “autoantigenomics”
Wei-Hong Yang and Donald B. Bloch
RNA. 2007 May; 13(5): 704–712. doi: 10.1261/rna.411907.
PMCID: PMC1852818
Articles
Structure probing of tmRNA in distinct stages of trans-translation
Natalia Ivanova, Magnus Lindell, Michael Pavlov, Lovisa Holmberg Schiavone, E. Gerhart H. Wagner, and Måns Ehrenberg
RNA. 2007 May; 13(5): 713–722. doi: 10.1261/rna.451507.
PMCID: PMC1852820
Double-stranded regions are essential design components of potent inhibitors of RISC function
Annaleen Vermeulen, Barbara Robertson, Andrew B. Dalby, William S. Marshall, Jon Karpilow, Devin Leake, Anastasia Khvorova, and Scott Baskerville
RNA. 2007 May; 13(5): 723–730. doi: 10.1261/rna.448107.
PMCID: PMC1852807
Bunyavirus mRNA synthesis is coupled to translation to prevent premature transcription termination
John N. Barr
RNA. 2007 May; 13(5): 731–736. doi: 10.1261/rna.436607.
PMCID: PMC1852823
An essential role of KREPB4 in RNA editing and structural integrity of the editosome in Trypanosoma brucei
Vinod Kumar Babbarwal, Michele Fleck, Nancy Lewis Ernst, Achim Schnaufer, and Kenneth Stuart
RNA. 2007 May; 13(5): 737–744. doi: 10.1261/rna.327707.
PMCID: PMC1852822
Immediate early response of the circadian polyA ribonuclease nocturnin to two extracellular stimuli
Eduardo Garbarino-Pico, Shuang Niu, Mark D. Rollag, Carl A. Strayer, Joseph C. Besharse, and Carla B. Green
RNA. 2007 May; 13(5): 745–755. doi: 10.1261/rna.286507.
PMCID: PMC1852813
Analysis of FMR1 gene expression in female premutation carriers using robust segmented linear regression models
Eva García-Alegría, Berta Ibáñez, Mónica Mínguez, Marisa Poch, Alberto Valiente, Arantza Sanz-Parra, Cristina Martinez-Bouzas, Elena Beristain, and Maria-Isabel Tejada
RNA. 2007 May; 13(5): 756–762. doi: 10.1261/rna.206307.
PMCID: PMC1852810
A U-turn motif-containing stem–loop in the coronavirus 5′ untranslated region plays a functional role in replication
Pinghua Liu, Lichun Li, Jason J. Millership, Hyojeung Kang, Julian L. Leibowitz, and David P. Giedroc
RNA. 2007 May; 13(5): 763–780. doi: 10.1261/rna.261807.
PMCID: PMC1852815
Breaking pseudo-twofold symmetry in the poliovirus 3′-UTR Y-stem by restoring Watson–Crick base pairs
Jan Zoll, Marco Tessari, Frank J.M. Van Kuppeveld, Willem J.G. Melchers, and Hans A. Heus
RNA. 2007 May; 13(5): 781–792. doi: 10.1261/rna.375607.
PMCID: PMC1852819
Method
New photoreactive tRNA derivatives for probing the peptidyl transferase center of the ribosome
Anton V. Manuilov, Stephen S. Hixson, and Robert A. Zimmermann
RNA. 2007 May; 13(5): 793–800. doi: 10.1261/rna.425907.
PMCID: PMC1852821
Erratum
ERRATUM
RNA. 2007 May; 13(5): 801.
PMCID: PMC1852808
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