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Volume 12(8);  August 2006
Letters to the Editor
Conventional 3′ end formation is not required for NMD substrate recognition in Saccharomyces cerevisiae
Kristian E. Baker and Roy Parker
RNA. 2006 August; 12(8): 1441–1445. doi: 10.1261/rna.92706.
PMCID: PMC1524890
The fragile X mental retardation protein interacts with a distinct mRNA nuclear export factor NXF2
Dongmei Lai, Denny Sakkas, and Yingqun Huang
RNA. 2006 August; 12(8): 1446–1449. doi: 10.1261/rna.94306.
PMCID: PMC1524883
Bioinformatics
Prediction of RNA binding sites in proteins from amino acid sequence
Michael Terribilini, Jae-Hyung Lee, Changhui Yan, Robert L. Jernigan, Vasant Honavar, and Drena Dobbs
RNA. 2006 August; 12(8): 1450–1462. doi: 10.1261/rna.2197306.
PMCID: PMC1524891
Reports
The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning
Eric L. Christian, Kari M.J. Smith, Nicholas Perera, and Michael E. Harris
RNA. 2006 August; 12(8): 1463–1467. doi: 10.1261/rna.158606.
PMCID: PMC1524898
Structure–function analysis of Plasmodium RNA triphosphatase and description of a triphosphate tunnel metalloenzyme superfamily that includes Cet1-like RNA triphosphatases and CYTH proteins
Chunling Gong, Paul Smith, and Stewart Shuman
RNA. 2006 August; 12(8): 1468–1474. doi: 10.1261/rna.119806.
PMCID: PMC1524888
Articles
Structural study of elements of Tetrahymena telomerase RNA stem–loop IV domain important for function
Rebecca J. Richards, Haihong Wu, Lukas Trantirek, Catherine M. O'Connor, Kathleen Collins, and Juli Feigon
RNA. 2006 August; 12(8): 1475–1485. doi: 10.1261/rna.112306.
PMCID: PMC1524899
A novel nucleocytoplasmic shuttling sequence of DAZAP1, a testis-abundant RNA-binding protein
Yi-Tzu Lin and Pauline H. Yen
RNA. 2006 August; 12(8): 1486–1493. doi: 10.1261/rna.42206.
PMCID: PMC1524892
Identification, cloning, and functional analysis of the human U6 snRNA-specific terminal uridylyl transferase
Ralf Trippe, Elena Guschina, Markus Hossbach, Henning Urlaub, Reinhard Lührmann, and Bernd-Joachim Benecke
RNA. 2006 August; 12(8): 1494–1504. doi: 10.1261/rna.87706.
PMCID: PMC1524887
Ribosomal protein S1 promotes transcriptional cycling
Maxim V. Sukhodolets, Susan Garges, and Sankar Adhya
RNA. 2006 August; 12(8): 1505–1513. doi: 10.1261/rna.2321606.
PMCID: PMC1524893
Dicer-2 and R2D2 coordinately bind siRNA to promote assembly of the siRISC complexes
Xiang Liu, Feng Jiang, Savitha Kalidas, Dean Smith, and Qinghua Liu
RNA. 2006 August; 12(8): 1514–1520. doi: 10.1261/rna.101606.
PMCID: PMC1524895
The role of a metastable RNA secondary structure in hepatitis delta virus genotype III RNA editing
Sarah D. Linnstaedt, Wojciech K. Kasprzak, Bruce A. Shapiro, and John L. Casey
RNA. 2006 August; 12(8): 1521–1533. doi: 10.1261/rna.89306.
PMCID: PMC1524886
The conserved AAUAAA hexamer of the poly(A) signal can act alone to trigger a stable decrease in RNA polymerase II transcription velocity
Anita Nag, Kazim Narsinh, Amir Kazerouninia, and Harold G. Martinson
RNA. 2006 August; 12(8): 1534–1544. doi: 10.1261/rna.103206.
PMCID: PMC1524889
Arginine methylation regulates mitochondrial gene expression in Trypanosoma brucei through multiple effector proteins
Christopher C. Goulah, Michel Pelletier, and Laurie K. Read
RNA. 2006 August; 12(8): 1545–1555. doi: 10.1261/rna.90106.
PMCID: PMC1524885
Regulation of poly(A) binding protein function in translation: Characterization of the Paip2 homolog, Paip2B
Juan José Berlanga, Alexis Baass, and Nahum Sonenberg
RNA. 2006 August; 12(8): 1556–1568. doi: 10.1261/rna.106506.
PMCID: PMC1524897
Polyamine-regulated unproductive splicing and translation of spermidine/spermine N1-acetyltransferase
Mervi T. Hyvönen, Anne Uimari, Tuomo A. Keinänen, Sami Heikkinen, Riikka Pellinen, Tiina Wahlfors, Arja Korhonen, Ale Närvänen, Jarmo Wahlfors, Leena Alhonen, and Juhani Jänne
RNA. 2006 August; 12(8): 1569–1582. doi: 10.1261/rna.39806.
PMCID: PMC1524884
A previously unidentified activity of yeast and mouse RNA:pseudouridine synthases 1 (Pus1p) on tRNAs
Isabelle Behm-Ansmant, Séverine Massenet, FranÇoise Immel, Jeffrey R. Patton, Yuri Motorin, and Christiane Branlant
RNA. 2006 August; 12(8): 1583–1593. doi: 10.1261/rna.100806.
PMCID: PMC1524882
Method
A three-hybrid screen identifies mRNAs controlled by a regulatory protein
Daniel Seay, Brad Hook, Katie Evans, and Marvin Wickens
RNA. 2006 August; 12(8): 1594–1600. doi: 10.1261/rna.145306.
PMCID: PMC1524894
Erratum
ERRATUM
RNA. 2006 August; 12(8): 1601.
PMCID: PMC1524896
Corrects: Audrey R. Nelson, et al. tRNA regulation of gene expression: Interactions of an mRNA 5′-UTR with a regulatory tRNA. RNA. 2006 July; 12(7): 1254–1261.
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