| | Articles Expression of the human DNA glycosylase hSMUG1 in Trypanosoma brucei causes DNA damage and interferes with J biosynthesis Sebastian Ulbert, Mike Cross, Robert J. Boorstein, George W. Teebor, and Piet Borst PMCID: PMC137116 Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge and its unexpected adaptive capabilities to extreme environments Hideto Takami, Yoshihiro Takaki, and Ikuo Uchiyama PMCID: PMC137110 Interaction of the ocr gene 0.3 protein of bacteriophage T7 with EcoKI restriction/modification enzyme C. Atanasiu, T.-J. Su, S. S. Sturrock, and D. T. F. Dryden PMCID: PMC137103 Micro-processing events in mRNAs identified by DHPLC analysis Angela Gallo, Emma Thomson, James Brindle, Mary A. O’Connell, and Liam P. Keegan PMCID: PMC137101 G4 DNA unwinding by BLM and Sgs1p: substrate specificity and substrate-specific inhibition Michael D. Huber, Damian C. Lee, and Nancy Maizels PMCID: PMC137114 High resolution crystal structure of domain I of the Saccharomyces cerevisiae homing endonuclease PI-SceI Erik Werner, Wolfgang Wende, Alfred Pingoud, and Udo Heinemann PMCID: PMC137108 Secondary structure and DNA binding by the C-terminal domain of the transcriptional activator NifA from Klebsiella pneumoniae Pampa Ray, K. John Smith, Rosemary A. Parslow, Ray Dixon, and Eva I. Hyde PMCID: PMC137112 Secondary structure polymorphism in Oxytricha nova telomeric DNA Christoph Krafft, James M. Benevides, and George J. Thomas, Jr PMCID: PMC137102 Density of points clustering, application to transcriptomic data analysis Nicolas Wicker, Doulaye Dembele, Wolfgang Raffelsberger, and Olivier Poch PMCID: PMC137097 Endogenous expression of a high-affinity pseudoknot RNA aptamer suppresses replication of HIV-1 Laurent Chaloin, Maik Jörg Lehmann, Georg Sczakiel, and Tobias Restle PMCID: PMC137107 Sequence analysis of bacteriophage T4 DNA packaging/terminase genes 16 and 17 reveals a common ATPase center in the large subunit of viral terminases Michael S. Mitchell, Shigenobu Matsuzaki, Shosuke Imai, and Venigalla B. Rao PMCID: PMC137109 Topoisomerase III is required for accurate DNA replication and chromosome segregation in Schizosaccharomyces pombe Misook Oh, In-Soon Choi, and Sang Dai Park PMCID: PMC137115 Oligomerization of the telomerase reverse transcriptase from Euplotes crassus Libin Wang, Sierra R. Dean, and Dorothy E. Shippen PMCID: PMC137098 Identification of mRNA decapping activities and an ARE-regulated 3′ to 5′ exonuclease activity in trypanosome extracts Joseph Milone, Jeffrey Wilusz, and Vivian Bellofatto PMCID: PMC137106 Site-directed mutagenesis reveals roles for conserved amino acid residues in the hexameric DNA helicase DnaB from Bacillus stearothermophilus P. Soultanas and D. B. Wigley PMCID: PMC137111 Mediation of the A/B-DNA helix transition by G-tracts in the crystal structure of duplex CATGGGCCCATG Ho-Leung Ng and Richard E. Dickerson PMCID: PMC137100 Synthesis of stable-isotope enriched 5-methylpyrimidines and their use as probes of base reactivity in DNA Artur Burdzy, Katherine T. Noyes, Victoria Valinluck, and Lawrence C. Sowers PMCID: PMC137105 DNA-PK-dependent binding of DNA ends to plasmids containing nuclear matrix attachment region DNA sequences: evidence for assembly of a repair complex Stanley K. Mauldin, Robert C. Getts, Wenjing Liu, and Thomas D. Stamato PMCID: PMC137113 Melting studies of dangling-ended DNA hairpins: effects of end length, loop sequence and biotinylation of loop bases Peter V. Riccelli, Kathleen E. Mandell, and Albert S. Benight PMCID: PMC137099 Binding affinity of Escherichia coli RNA polymerase·σ54 holoenzyme for the glnAp2, nifH and nifL promoters Sabine K. Vogel, Alexandra Schulz, and Karsten Rippe PMCID: PMC137104 NAR Methods Online High throughput parallel synthesis of oligonucleotides with 1536 channel synthesizer Ji-Yen Cheng, Hung-Hui Chen, Yu-Shu Kao, Wei-Chen Kao, and Konan Peck PMCID: PMC137118 Tripartite molecular beacons Razvan Nutiu and Yingfu Li PMCID: PMC137119 Rapid gene cloning using terminator primers and modular vectors William F. Donahue, Brian M. Turczyk, and Kevin A. Jarrell PMCID: PMC137120 Corrigendum Nucleic Acids Res. 2002 September 15; 30(18): 4102. PMCID: PMC137117 Corrects: Ilya G. Lyakhov, et al. The P1 phage replication protein RepA contacts an otherwise inaccessible thymine N3 proton by DNA distortion or base flipping. Nucleic Acids Res. 2001 December 1; 29(23): 4892–4900. |
