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Volume 105(18);  May 6, 2008
This Week in PNAS
In This Issue
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6503–6504. doi: 10.1073/iti1808105.
PMCID: PMC2373328
Commentary
Why conservation planning needs socioeconomic data
Stephen Polasky
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6505–6506. doi: 10.1073/pnas.0802815105.
PMCID: PMC2373354
Perspective
What's the point of the type III secretion system needle?
Ariel J. Blocker, Janet E. Deane, Andreas K. J. Veenendaal, Pietro Roversi, Julie L. Hodgkinson, Steven Johnson, and Susan M. Lea
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6507–6513. doi: 10.1073/pnas.0708344105.
PMCID: PMC2373345
Physical Sciences
Chemistry
Folding of a donor–acceptor polyrotaxane by using noncovalent bonding interactions
Wenyu Zhang, William R. Dichtel, Adam Z. Stieg, Diego Benítez, James K. Gimzewski, James R. Heath, and J. Fraser Stoddart
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6514–6519. doi: 10.1073/pnas.0711072105.
PMCID: PMC2373343
Investigations of valanimycin biosynthesis: Elucidation of the role of seryl-tRNA
Ram P. Garg, Xuelei L. Qian, Lawrence B. Alemany, Sean Moran, and Ronald J. Parry
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6543–6547. doi: 10.1073/pnas.0708957105.
PMCID: PMC2373340
Geology
Younger Dryas “black mats” and the Rancholabrean termination in North America
C. Vance Haynes, Jr
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6520–6525. doi: 10.1073/pnas.0800560105.
PMCID: PMC2373324
A polycyclic terpenoid that alleviates oxidative stress
T. Bosak, R. M. Losick, and A. Pearson
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6725–6729. doi: 10.1073/pnas.0800199105.
PMCID: PMC2373358
Geophysics
Prediction of an U2S3-type polymorph of Al2O3 at 3.7 Mbar
Koichiro Umemoto and Renata M. Wentzcovitch
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6526–6530. doi: 10.1073/pnas.0711925105.
PMCID: PMC2373319
Biological Sciences
Applied Biological Sciences
Mice lacking angiotensin-converting enzyme have increased energy expenditure, with reduced fat mass and improved glucose clearance
Anura P. Jayasooriya, Michael L. Mathai, Lesley L. Walker, Denovan P. Begg, Derek A. Denton, David Cameron-Smith, Gary F. Egan, Michael J. McKinley, Paula D. Rodger, Andrew J. Sinclair, John D. Wark, Harrison S. Weisinger, Mark Jois, and Richard S. Weisinger
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6531–6536. doi: 10.1073/pnas.0802690105.
PMCID: PMC2373349
Cyclic distension of fibrin-based tissue constructs: Evidence of adaptation during growth of engineered connective tissue
Zeeshan H. Syedain, Justin S. Weinberg, and Robert T. Tranquillo
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6537–6542. doi: 10.1073/pnas.0711217105.
PMCID: PMC2373356
Biochemistry
Investigations of valanimycin biosynthesis: Elucidation of the role of seryl-tRNA
Ram P. Garg, Xuelei L. Qian, Lawrence B. Alemany, Sean Moran, and Ronald J. Parry
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6543–6547. doi: 10.1073/pnas.0708957105.
PMCID: PMC2373340
Biogenesis of extracellular microfibrils: Multimerization of the fibrillin-1 C terminus into bead-like structures enables self-assembly
Dirk Hubmacher, Ehab I. El-Hallous, Valentin Nelea, Mari T. Kaartinen, Eunice R. Lee, and Dieter P. Reinhardt
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6548–6553. doi: 10.1073/pnas.0706335105.
PMCID: PMC2373353
Hypusine modification for growth is the major function of spermidine in Saccharomyces cerevisiae polyamine auxotrophs grown in limiting spermidine
Manas K. Chattopadhyay, Myung Hee Park, and Herbert Tabor
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6554–6559. doi: 10.1073/pnas.0710970105.
PMCID: PMC2373341
Structural and mechanistic insight into the basis of mucopolysaccharidosis IIIB
Elizabeth Ficko-Blean, Keith A. Stubbs, Oksana Nemirovsky, David J. Vocadlo, and Alisdair B. Boraston
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6560–6565. doi: 10.1073/pnas.0711491105.
PMCID: PMC2373330
The crystal structure and dimerization interface of GADD45γ
Joseph D. Schrag, Sarn Jiralerspong, Myriam Banville, Maria Luz Jaramillo, and Maureen D. O'Connor-McCourt
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6566–6571. doi: 10.1073/pnas.0800086105.
PMCID: PMC2373355
Revealing the moonlighting role of NADP in the structure of a flavin-containing monooxygenase
Andrea Alfieri, Enrico Malito, Roberto Orru, Marco W. Fraaije, and Andrea Mattevi
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6572–6577. doi: 10.1073/pnas.0800859105.
PMCID: PMC2373336
Design of protein function leaps by directed domain interface evolution
Jin Huang, Akiko Koide, Koki Makabe, and Shohei Koide
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6578–6583. doi: 10.1073/pnas.0801097105.
PMCID: PMC2373342
Activation of PI3K/Akt and MAPK pathways regulates Myc-mediated transcription by phosphorylating and promoting the degradation of Mad1
Jidong Zhu, John Blenis, and Junying Yuan
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6584–6589. doi: 10.1073/pnas.0802785105.
PMCID: PMC2373325
Biophysics
From the Cover:
Assembly mechanism of recombinant spider silk proteins
S. Rammensee, U. Slotta, T. Scheibel, and A. R. Bausch
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6590–6595. doi: 10.1073/pnas.0709246105.
PMCID: PMC2373321
Release of hydrophobic molecules from polymer micelles into cell membranes revealed by Förster resonance energy transfer imaging
Hongtao Chen, Sungwon Kim, Li Li, Shuyi Wang, Kinam Park, and Ji-Xin Cheng
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6596–6601. doi: 10.1073/pnas.0707046105.
PMCID: PMC2373326
Single-molecule nonequilibrium periodic Mg2+-concentration jump experiments reveal details of the early folding pathways of a large RNA
Xiaohui Qu, Glenna J. Smith, Kang Taek Lee, Tobin R. Sosnick, Tao Pan, and Norbert F. Scherer
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6602–6607. doi: 10.1073/pnas.0801436105.
PMCID: PMC2373323
Cell Biology
Mathematical modeling identifies Smad nucleocytoplasmic shuttling as a dynamic signal-interpreting system
Bernhard Schmierer, Alexander L. Tournier, Paul A. Bates, and Caroline S. Hill
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6608–6613. doi: 10.1073/pnas.0710134105.
PMCID: PMC2373357
β-Arrestin-1 mediates glucagon-like peptide-1 signaling to insulin secretion in cultured pancreatic β cells
Noriyuki Sonoda, Takeshi Imamura, Takeshi Yoshizaki, Jennie L. Babendure, Juu-Chin Lu, and Jerrold M. Olefsky
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6614–6619. doi: 10.1073/pnas.0710402105.
PMCID: PMC2373360
Bone marrow-derived circulating endothelial precursors do not contribute to vascular endothelium and are not needed for tumor growth
Susanna Purhonen, Jarmo Palm, Derrick Rossi, Nina Kaskenpää, Iiro Rajantie, Seppo Ylä-Herttuala, Kari Alitalo, Irving L. Weissman, and Petri Salven
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6620–6625. doi: 10.1073/pnas.0710516105.
PMCID: PMC2365563
Rapid signal transduction in living cells is a unique feature of mechanotransduction
Sungsoo Na, Olivier Collin, Farhan Chowdhury, Bernard Tay, Mingxing Ouyang, Yingxiao Wang, and Ning Wang
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6626–6631. doi: 10.1073/pnas.0711704105.
PMCID: PMC2373315
Phenotypic transcription factors epigenetically mediate cell growth control
Syed A. Ali, Sayyed K. Zaidi, Caroline S. Dacwag, Nunciada Salma, Daniel W. Young, Abdul R. Shakoori, Martin A. Montecino, Jane B. Lian, Andre J. van Wijnen, Anthony N. Imbalzano, Gary S. Stein, and Janet L. Stein
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6632–6637. doi: 10.1073/pnas.0800970105.
PMCID: PMC2373311
Cardiac developmental defects and eccentric right ventricular hypertrophy in cardiomyocyte focal adhesion kinase (FAK) conditional knockout mice
Xu Peng, Xiaoyang Wu, Joseph E. Druso, Huijun Wei, Ann Yong-Jin Park, Marc S. Kraus, Ana Alcaraz, Ju Chen, Shu Chien, Richard A. Cerione, and Jun-Lin Guan
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6638–6643. doi: 10.1073/pnas.0802319105.
PMCID: PMC2373317
Developmental Biology
Pygopus activates Wingless target gene transcription through the mediator complex subunits Med12 and Med13
Inés Carrera, Florence Janody, Nina Leeds, Fabien Duveau, and Jessica E. Treisman
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6644–6649. doi: 10.1073/pnas.0709749105.
PMCID: PMC2373359
Functional specialization among insect chitinase family genes revealed by RNA interference
Qingsong Zhu, Yasuyuki Arakane, Richard W. Beeman, Karl J. Kramer, and Subbaratnam Muthukrishnan
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6650–6655. doi: 10.1073/pnas.0800739105.
PMCID: PMC2373347
ES cell pluripotency and germ-layer formation require the SWI/SNF chromatin remodeling component BAF250a
Xiaolin Gao, Peri Tate, Ping Hu, Robert Tjian, William C. Skarnes, and Zhong Wang
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6656–6661. doi: 10.1073/pnas.0801802105.
PMCID: PMC2373334
The fetal liver is a niche for maturation of primitive erythroid cells
Joan Isern, Stuart T. Fraser, Zhiyong He, and Margaret H. Baron
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6662–6667. doi: 10.1073/pnas.0802032105.
PMCID: PMC2373346
Environmental Sciences
From the Cover:
Impacts of climate warming on terrestrial ectotherms across latitude
Curtis A. Deutsch, Joshua J. Tewksbury, Raymond B. Huey, Kimberly S. Sheldon, Cameron K. Ghalambor, David C. Haak, and Paul R. Martin
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6668–6672. doi: 10.1073/pnas.0709472105.
PMCID: PMC2373333
On the protection of “protected areas”
Lucas N. Joppa, Scott R. Loarie, and Stuart L. Pimm
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6673–6678. doi: 10.1073/pnas.0802471105.
PMCID: PMC2365567
Evolution
Noncanonical role of Hox14 revealed by its expression patterns in lamprey and shark
Shigehiro Kuraku, Yoko Takio, Koji Tamura, Hideaki Aono, Axel Meyer, and Shigeru Kuratani
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6679–6683. doi: 10.1073/pnas.0710947105.
PMCID: PMC2373320
Immunology
Selective targeting of ITK blocks multiple steps of HIV replication
Julie A. Readinger, Gillian M. Schiralli, Jian-Kang Jiang, Craig J. Thomas, Avery August, Andrew J. Henderson, and Pamela L. Schwartzberg
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6684–6689. doi: 10.1073/pnas.0709659105.
PMCID: PMC2365562
Indoleamine 2,3-dioxygenase in lung dendritic cells promotes Th2 responses and allergic inflammation
Hui Xu, Timothy B. Oriss, Mingjian Fei, Adam C. Henry, Barbro N. Melgert, Li Chen, Andrew L. Mellor, David H. Munn, Charles G. Irvin, Prabir Ray, and Anuradha Ray
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6690–6695. doi: 10.1073/pnas.0708809105.
PMCID: PMC2373348
Structural basis for NKG2A/CD94 recognition of HLA-E
Brett K. Kaiser, Juan Carlos Pizarro, Julie Kerns, and Roland K. Strong
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6696–6701. doi: 10.1073/pnas.0802736105.
PMCID: PMC2373352
Medical Sciences
High blood pressure arising from a defect in vascular function
Simon K. Michael, Howard K. Surks, Yuepeng Wang, Yan Zhu, Robert Blanton, Michelle Jamnongjit, Mark Aronovitz, Wendy Baur, Kenichi Ohtani, Michael K. Wilkerson, Adrian D. Bonev, Mark T. Nelson, Richard H. Karas, and Michael E. Mendelsohn
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6702–6707. doi: 10.1073/pnas.0802128105.
PMCID: PMC2373316
Microdeletions are a general feature of adult and adolescent acute lymphoblastic leukemia: Unexpected similarities with pediatric disease
Kajsa Paulsson, Jean-Baptiste Cazier, Finlay MacDougall, Jane Stevens, Irina Stasevich, Nikoletta Vrcelj, Tracy Chaplin, Debra M. Lillington, T. Andrew Lister, and Bryan D. Young
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6708–6713. doi: 10.1073/pnas.0800408105.
PMCID: PMC2373322
Inhibition of neural crest migration underlies craniofacial dysmorphology and Hirschsprung's disease in Bardet–Biedl syndrome
Jonathan L. Tobin, Matt Di Franco, Erica Eichers, Helen May-Simera, Monica Garcia, Jiong Yan, Robyn Quinlan, Monica J. Justice, Raoul C. Hennekam, James Briscoe, Masazumi Tada, Roberto Mayor, Alan J. Burns, James R. Lupski, Peter Hammond, and Philip L. Beales
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6714–6719. doi: 10.1073/pnas.0707057105.
PMCID: PMC2373327
Targeted deletion of the murine corneodesmosin gene delineates its essential role in skin and hair physiology
Mitsuru Matsumoto, Yiqing Zhou, Shinji Matsuo, Hideki Nakanishi, Kenji Hirose, Hajimu Oura, Seiji Arase, Akemi Ishida-Yamamoto, Yoshimi Bando, Keisuke Izumi, Hiroshi Kiyonari, Naoko Oshima, Rika Nakayama, Akemi Matsushima, Fumiko Hirota, Yasuhiro Mouri, Noriyuki Kuroda, Shigetoshi Sano, and David D. Chaplin
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6720–6724. doi: 10.1073/pnas.0709345105.
PMCID: PMC2373361
Microbiology
A polycyclic terpenoid that alleviates oxidative stress
T. Bosak, R. M. Losick, and A. Pearson
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6725–6729. doi: 10.1073/pnas.0800199105.
PMCID: PMC2373358
From the Cover:
Extreme polyploidy in a large bacterium
Jennifer E. Mendell, Kendall D. Clements, J. Howard Choat, and Esther R. Angert
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6730–6734. doi: 10.1073/pnas.0707522105.
PMCID: PMC2373351
Functional plasticity of a peroxidase allows evolution of diverse disulfide-reducing pathways
Melinda J. Faulkner, Karthik Veeravalli, Stéphanie Gon, George Georgiou, and Jon Beckwith
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6735–6740. doi: 10.1073/pnas.0801986105.
PMCID: PMC2373332
Neuroscience
Neural correlates of mentalizing-related computations during strategic interactions in humans
Alan N. Hampton, Peter Bossaerts, and John P. O'Doherty
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6741–6746. doi: 10.1073/pnas.0711099105.
PMCID: PMC2373314
From the Cover:
Simulation of talking faces in the human brain improves auditory speech recognition
Katharina von Kriegstein, Özgür Dogan, Martina Grüter, Anne-Lise Giraud, Christian A. Kell, Thomas Grüter, Andreas Kleinschmidt, and Stefan J. Kiebel
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6747–6752. doi: 10.1073/pnas.0710826105.
PMCID: PMC2365564
Global versus local processing of frequency-modulated tones in gerbils: An animal model of lateralized auditory cortex functions
Wolfram Wetzel, Frank W. Ohl, and Henning Scheich
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6753–6758. doi: 10.1073/pnas.0707844105.
PMCID: PMC2365561
The effect of a serotonin-induced dissociation between spiking and perisynaptic activity on BOLD functional MRI
Alexander Rauch, Gregor Rainer, and Nikos K. Logothetis
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6759–6764. doi: 10.1073/pnas.0800312105.
PMCID: PMC2373337
Modular patterning of structure and function of the striatum by retinoid receptor signaling
Wen-Lin Liao, Hsiu-Chao Tsai, Hsiao-Fang Wang, Josephine Chang, Kuan-Ming Lu, Hsiao-Lin Wu, Yi-Chao Lee, Ting-Fen Tsai, Hiroshi Takahashi, Michael Wagner, Norbert B. Ghyselinck, Pierre Chambon, and Fu-Chin Liu
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6765–6770. doi: 10.1073/pnas.0802109105.
PMCID: PMC2373312
Physiology
Anemia and splenomegaly in cGKI-deficient mice
Michael Föller, Susanne Feil, Kamran Ghoreschi, Saisudha Koka, Andrea Gerling, Martin Thunemann, Franz Hofmann, Beat Schuler, Johannes Vogel, Bernd Pichler, Ravi S. Kasinathan, Jan P. Nicolay, Stephan M. Huber, Florian Lang, and Robert Feil
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6771–6776. doi: 10.1073/pnas.0708940105.
PMCID: PMC2373362
Insulin signaling and FOXO regulate the overwintering diapause of the mosquito Culex pipiens
Cheolho Sim and David L. Denlinger
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6777–6781. doi: 10.1073/pnas.0802067105.
PMCID: PMC2373331
Plant Biology
From the Cover:
Mutations in topoisomerase I as a self-resistance mechanism coevolved with the production of the anticancer alkaloid camptothecin in plants
Supaart Sirikantaramas, Mami Yamazaki, and Kazuki Saito
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6782–6786. doi: 10.1073/pnas.0801038105.
PMCID: PMC2365566
Corrections
Correction for Assarsson et al., Kinetic analysis of a complete poxvirus transcriptome reveals an immediate-early class of genes
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6787. doi: 10.1073/pnas.0803050105.
PMCID: PMC2373344
Corrects: Erika Assarsson, et al. Kinetic analysis of a complete poxvirus transcriptome reveals an immediate-early class of genes. Proc Natl Acad Sci U S A. 2008 February 12; 105(6): 2140–2145.
Correction for Möglich et al., End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation
Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6787. doi: 10.1073/pnas.0803144105.
PMCID: PMC2373350
Corrects: Andreas Möglich, et al. End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation. Proc Natl Acad Sci U S A. 2006 August 15; 103(33): 12394–12399.
Other Issues:  previous | next | latest | archive