| | Commentaries Announcing the Andy Kaplan Prize and call for nominations Alice Telesnitsky Retrovirology. 2007; 4: 3. Published online 2007 January 18. doi: 10.1186/1742-4690-4-3.PMCID: PMC1783665 Methylation: a regulator of HIV-1 replication? Venkat RK Yedavalli and Kuan-Teh Jeang Retrovirology. 2007; 4: 9. Published online 2007 February 2. doi: 10.1186/1742-4690-4-9.PMCID: PMC1796896 Impact of the 16th International Conference on AIDS: can these conferences lead to policy change? Helene Gayle and Mark A Wainberg Retrovirology. 2007; 4: 13. Published online 2007 February 8. doi: 10.1186/1742-4690-4-13.PMCID: PMC1802089 HIV/AIDS in Pakistan: the battle begins Mohammad A Rai, Haider J Warraich, Syed H Ali, and Vivek R Nerurkar Retrovirology. 2007; 4: 22. Published online 2007 March 21. doi: 10.1186/1742-4690-4-22.PMCID: PMC1847529 The silent defense: Micro-RNA directed defense against HIV-1 replication Ajit Kumar Retrovirology. 2007; 4: 26. Published online 2007 April 12. doi: 10.1186/1742-4690-4-26.PMCID: PMC1865552 Small non-coding RNAs, mammalian cells, and viruses: regulatory interactions? Man Lung Yeung, Monsef Benkirane, and Kuan-Teh Jeang Retrovirology. 2007; 4: 74. Published online 2007 October 15. doi: 10.1186/1742-4690-4-74.PMCID: PMC2164956 microRNAs in viral oncogenesis Vinod Scaria and Vaibhav Jadhav Retrovirology. 2007; 4: 82. Published online 2007 November 24. doi: 10.1186/1742-4690-4-82.PMCID: PMC2217556 Bridging fundamental RNA biology, retroviral replication, and oncogenesis: Karen Beemon wins the 2007 Retrovirology Prize Kathleen Boris-Lawrie Retrovirology. 2007; 4: 88. Published online 2007 December 10. doi: 10.1186/1742-4690-4-88.PMCID: PMC2211504 Editorials Impact factor, H index, peer comparisons, and Retrovirology: is it time to individualize citation metrics? Kuan-Teh Jeang Retrovirology. 2007; 4: 42. Published online 2007 June 18. doi: 10.1186/1742-4690-4-42.PMCID: PMC1894640 The young, not-so-young, and the 2007 Retrovirology Prize: call for nominations Kuan-Teh Jeang Retrovirology. 2007; 4: 64. Published online 2007 September 17. doi: 10.1186/1742-4690-4-64.PMCID: PMC2034386 World AIDS Day 2007: AIDS at 26, are we there yet? Kuan-Teh Jeang Retrovirology. 2007; 4: 86. Published online 2007 December 1. doi: 10.1186/1742-4690-4-86.PMCID: PMC2169258 Hypothesis APOBEC3G levels predict rates of progression to AIDS Xia Jin, Hulin Wu, and Harold Smith Retrovirology. 2007; 4: 20. Published online 2007 March 20. doi: 10.1186/1742-4690-4-20.PMCID: PMC1832211 Research Crystal structure of an FIV/HIV chimeric protease complexed with the broad-based inhibitor, TL-3 Holly Heaslet, Ying-Chuan Lin, Karen Tam, Bruce E Torbett, John H Elder, and C David Stout Retrovirology. 2007; 4: 1. Published online 2007 January 9. doi: 10.1186/1742-4690-4-1.PMCID: PMC1781954 SIVSM/HIV-2 Vpx proteins promote retroviral escape from a proteasome-dependent restriction pathway present in human dendritic cells Caroline Goujon, Lise Rivière, Loraine Jarrosson-Wuilleme, Jeanine Bernaud, Dominique Rigal, Jean-Luc Darlix, and Andrea Cimarelli Retrovirology. 2007; 4: 2. Published online 2007 January 9. doi: 10.1186/1742-4690-4-2.PMCID: PMC1779362 Effect of chloroquine on reducing HIV-1 replication in vitro and the DC-SIGN mediated transfer of virus to CD4+ T-lymphocytes Marloes A Naarding, Elly Baan, Georgios Pollakis, and William A Paxton Retrovirology. 2007; 4: 6. Published online 2007 January 30. doi: 10.1186/1742-4690-4-6.PMCID: PMC1796897 The testis and epididymis are productively infected by SIV and SHIV in juvenile macaques during the post-acute stage of infection Miranda Shehu-Xhilaga, Stephen Kent, Jane Batten, Sarah Ellis, Joel Van der Meulen, Moira O'Bryan, Paul U Cameron, Sharon R Lewin, and Mark P Hedger Retrovirology. 2007; 4: 7. Published online 2007 January 31. doi: 10.1186/1742-4690-4-7.PMCID: PMC1805449 Analysis of the replication of HIV-1 forced to use tRNAMet(i) supports a link between primer selection, translation and encapsidation Uros V Djekic and Casey D Morrow Retrovirology. 2007; 4: 10. Published online 2007 February 2. doi: 10.1186/1742-4690-4-10.PMCID: PMC1797187 No genetic evidence for involvement of Deltaretroviruses in adult patients with precursor and mature T-cell neoplasms Thomas Burmeister, Stefan Schwartz, Michael Hummel, Dieter Hoelzer, and Eckhard Thiel Retrovirology. 2007; 4: 11. Published online 2007 February 7. doi: 10.1186/1742-4690-4-11.PMCID: PMC1802090 Rev-dependent lentiviral expression vector Yuntao Wu, Margaret H Beddall, and Jon W Marsh Retrovirology. 2007; 4: 12. Published online 2007 February 7. doi: 10.1186/1742-4690-4-12.PMCID: PMC1797186 The HBZ-SP1 isoform of human T-cell leukemia virus type I represses JunB activity by sequestration into nuclear bodies Patrick Hivin, Jihane Basbous, Frédéric Raymond, Daniel Henaff, Charlotte Arpin-André, Véronique Robert-Hebmann, Benoit Barbeau, and Jean-Michel Mesnard Retrovirology. 2007; 4: 14. Published online 2007 February 16. doi: 10.1186/1742-4690-4-14.PMCID: PMC1805765 Trans-inhibition of HIV-1 by a long hairpin RNA expressed within the viral genome Pavlina Konstantinova, Olivier ter Brake, Joost Haasnoot, Peter de Haan, and Ben Berkhout Retrovirology. 2007; 4: 15. Published online 2007 March 1. doi: 10.1186/1742-4690-4-15.PMCID: PMC1819390 Antagonistic interaction of HIV-1 Vpr with Hsf-mediated cellular heat shock response and Hsp16 in fission yeast (Schizosaccharomyces pombe) Zsigmond Benko, Dong Liang, Emmanuel Agbottah, Jason Hou, Lorena Taricani, Paul G Young, Michael Bukrinsky, and Richard Y Zhao Retrovirology. 2007; 4: 16. Published online 2007 March 7. doi: 10.1186/1742-4690-4-16.PMCID: PMC1828740 HIV-1 integrase inhibitors are substrates for the multidrug transporter MDR1-P-glycoprotein Maurizio Cianfriglia, Maria Luisa Dupuis, Agnese Molinari, Antonio Verdoliva, Roberta Costi, Clementina Maria Galluzzo, Mauro Andreotti, Andrea Cara, Roberto Di Santo, and Lucia Palmisano Retrovirology. 2007; 4: 17. Published online 2007 March 7. doi: 10.1186/1742-4690-4-17.PMCID: PMC1828167 In-Silico docking of HIV-1 integrase inhibitors reveals a novel drug type acting on an enzyme/DNA reaction intermediate Andrea Savarino Retrovirology. 2007; 4: 21. Published online 2007 March 20. doi: 10.1186/1742-4690-4-21.PMCID: PMC1847836 Rapamycin-induced inhibition of HTLV-I LTR activity is rescued by c-Myb Nicola J Rose and Andrew ML Lever Retrovirology. 2007; 4: 24. Published online 2007 April 3. doi: 10.1186/1742-4690-4-24.PMCID: PMC1852806 Sequential emergence and clinical implications of viral mutants with K70E and K65R mutation in reverse transcriptase during prolonged tenofovir monotherapy in rhesus macaques with chronic RT-SHIV infection Koen KA Van Rompay, Jeffrey A Johnson, Emily J Blackwood, Raman P Singh, Jonathan Lipscomb, Timothy B Matthews, Marta L Marthas, Niels C Pedersen, Norbert Bischofberger, Walid Heneine, and Thomas W North Retrovirology. 2007; 4: 25. Published online 2007 April 6. doi: 10.1186/1742-4690-4-25.PMCID: PMC1852805 hnRNP E1 and E2 have distinct roles in modulating HIV-1 gene expression Kathryn Woolaway, Kengo Asai, Andrew Emili, and Alan Cochrane Retrovirology. 2007; 4: 28. Published online 2007 April 23. doi: 10.1186/1742-4690-4-28.PMCID: PMC1863430 Efficient inhibition of HIV-1 expression by LNA modified antisense oligonucleotides and DNAzymes targeted to functionally selected binding sites Martin R Jakobsen, Joost Haasnoot, Jesper Wengel, Ben Berkhout, and Jørgen Kjems Retrovirology. 2007; 4: 29. Published online 2007 April 26. doi: 10.1186/1742-4690-4-29.PMCID: PMC1866241 Isolated receptor binding domains of HTLV-1 and HTLV-2 envelopes bind Glut-1 on activated CD4+ and CD8+ T cells Sandrina Kinet, Louise Swainson, Madakasira Lavanya, Cedric Mongellaz, Amélie Montel-Hagen, Marco Craveiro, Nicolas Manel, Jean-Luc Battini, Marc Sitbon, and Naomi Taylor Retrovirology. 2007; 4: 31. Published online 2007 May 15. doi: 10.1186/1742-4690-4-31.PMCID: PMC1876471 Antigen-presenting particle technology using inactivated surface-engineered viruses: induction of immune responses against infectious agents Joseph D Mosca, Yung-Nien Chang, and Gregory Williams Retrovirology. 2007; 4: 32. Published online 2007 May 15. doi: 10.1186/1742-4690-4-32.PMCID: PMC1885814 Immunogenicity of the outer domain of a HIV-1 clade C gp120 Hongying Chen, Xiaodong Xu, and Ian M Jones Retrovirology. 2007; 4: 33. Published online 2007 May 17. doi: 10.1186/1742-4690-4-33.PMCID: PMC1891314 HTLV-1 Tax mutants that do not induce G1 arrest are disabled in activating the anaphase promoting complex Randall Merling, Chunhua Chen, Sohee Hong, Ling Zhang, Meihong Liu, Yu-Liang Kuo, and Chou-Zen Giam Retrovirology. 2007; 4: 35. Published online 2007 May 29. doi: 10.1186/1742-4690-4-35.PMCID: PMC1894815 Human Polycomb group EED protein negatively affects HIV-1 assembly and release Dina Rakotobe, Jean-Claude Tardy, Patrice André, Saw See Hong, Jean-Luc Darlix, and Pierre Boulanger Retrovirology. 2007; 4: 37. Published online 2007 June 4. doi: 10.1186/1742-4690-4-37.PMCID: PMC1899515 Lentiviral vector design using alternative RNA export elements Taekeun Oh, Ali Bajwa, Guangfu Jia, and Frank Park Retrovirology. 2007; 4: 38. Published online 2007 June 5. doi: 10.1186/1742-4690-4-38.PMCID: PMC1904242 Expression pattern analysis of transcribed HERV sequences is complicated by ex vivo recombination Aline Flockerzi, Jochen Maydt, Oliver Frank, Alessia Ruggieri, Esther Maldener, Wolfgang Seifarth, Patrik Medstrand, Thomas Lengauer, Andreas Meyerhans, Christine Leib-Mösch, Eckart Meese, and Jens Mayer Retrovirology. 2007; 4: 39. Published online 2007 June 6. doi: 10.1186/1742-4690-4-39.PMCID: PMC1904241 Nuclear Factor 90(NF90) targeted to TAR RNA inhibits transcriptional activation of HIV-1 Emmanuel T Agbottah, Christine Traviss, James McArdle, Sambhav Karki, Georges C St Laurent, III, and Ajit Kumar Retrovirology. 2007; 4: 41. Published online 2007 June 12. doi: 10.1186/1742-4690-4-41.PMCID: PMC1910605 Persistence of attenuated HIV-1 rev alleles in an epidemiologically linked cohort of long-term survivors infected with nef-deleted virus Melissa J Churchill, Lisa Chiavaroli, Steven L Wesselingh, and Paul R Gorry Retrovirology. 2007; 4: 43. Published online 2007 July 1. doi: 10.1186/1742-4690-4-43.PMCID: PMC1933581 Recovery of fitness of a live attenuated simian immunodeficiency virus through compensation in both the coding and non-coding regions of the viral genome James B Whitney and Mark A Wainberg Retrovirology. 2007; 4: 44. Published online 2007 July 3. doi: 10.1186/1742-4690-4-44.PMCID: PMC1934378 Isolation and characterization of human cells resistant to retrovirus infection Patrycja Lech and Nikunj V Somia Retrovirology. 2007; 4: 45. Published online 2007 July 3. doi: 10.1186/1742-4690-4-45.PMCID: PMC1925114 Impairment of alternative splice sites defining a novel gammaretroviral exon within gag modifies the oncogenic properties of Akv murine leukemia virus Annette Balle Sørensen, Anders H Lund, Sandra Kunder, Leticia Quintanilla-Martinez, Jörg Schmidt, Bruce Wang, Matthias Wabl, and Finn Skou Pedersen Retrovirology. 2007; 4: 46. Published online 2007 July 6. doi: 10.1186/1742-4690-4-46.PMCID: PMC1936429 Inhibition of HIV-1 replication by P-TEFb inhibitors DRB, seliciclib and flavopiridol correlates with release of free P-TEFb from the large, inactive form of the complex Sebastian Biglione, Sarah A Byers, Jason P Price, Van Trung Nguyen, Olivier Bensaude, David H Price, and Wendy Maury Retrovirology. 2007; 4: 47. Published online 2007 July 11. doi: 10.1186/1742-4690-4-47.PMCID: PMC1948018 Analysis of the contribution of cellular and viral RNA to the packaging of APOBEC3G into HIV-1 virions Mohammad A Khan, Ritu Goila-Gaur, Sandrine Opi, Eri Miyagi, Hiroaki Takeuchi, Sandra Kao, and Klaus Strebel Retrovirology. 2007; 4: 48. Published online 2007 July 16. doi: 10.1186/1742-4690-4-48.PMCID: PMC1948019 Human T-lymphotropic virus type-1 p30 alters cell cycle G2 regulation of T lymphocytes to enhance cell survival Antara Datta, Lee Silverman, Andrew J Phipps, Hajime Hiraragi, Lee Ratner, and Michael D Lairmore Retrovirology. 2007; 4: 49. Published online 2007 July 16. doi: 10.1186/1742-4690-4-49.PMCID: PMC1937004 CD4-independent use of the CCR5 receptor by sequential primary SIVsm isolates Anna Laurén, Elzbieta Vincic, Hiroo Hoshino, Rigmor Thorstensson, and Eva Maria Fenyö Retrovirology. 2007; 4: 50. Published online 2007 July 23. doi: 10.1186/1742-4690-4-50.PMCID: PMC1950888 Primary T-cells from human CD4/CCR5-transgenic rats support all early steps of HIV-1 replication including integration, but display impaired viral gene expression Christine Goffinet, Nico Michel, Ina Allespach, Hanna-Mari Tervo, Volker Hermann, Hans-Georg Kräusslich, Warner C Greene, and Oliver T Keppler Retrovirology. 2007; 4: 53. Published online 2007 July 26. doi: 10.1186/1742-4690-4-53.PMCID: PMC1971067 Intracellular HIV-1 Gag localization is impaired by mutations in the nucleocapsid zinc fingers Boyan Grigorov, Didier Décimo, Fatima Smagulova, Christine Péchoux, Marylène Mougel, Delphine Muriaux, and Jean-Luc Darlix Retrovirology. 2007; 4: 54. Published online 2007 August 3. doi: 10.1186/1742-4690-4-54.PMCID: PMC1976323 The role of the N-terminal segment of CCR5 in HIV-1 Env-mediated membrane fusion and the mechanism of virus adaptation to CCR5 lacking this segment Gregory B Melikyan, Emily J Platt, and David Kabat Retrovirology. 2007; 4: 55. Published online 2007 August 8. doi: 10.1186/1742-4690-4-55.PMCID: PMC1995219 Basal shuttle of NF-κB/IκBα in resting T lymphocytes regulates HIV-1 LTR dependent expression Mayte Coiras, María Rosa López-Huertas, Joaquín Rullas, Maria Mittelbrunn, and José Alcamí Retrovirology. 2007; 4: 56. Published online 2007 August 8. doi: 10.1186/1742-4690-4-56.PMCID: PMC1988826 Endogenous TGF-β activation by reactive oxygen species is key to Foxp3 induction in TCR-stimulated and HIV-1-infected human CD4+CD25- T cells Shoba Amarnath, Li Dong, Jun Li, Yuntao Wu, and WanJun Chen Retrovirology. 2007; 4: 57. Published online 2007 August 9. doi: 10.1186/1742-4690-4-57.PMCID: PMC2096626 High genetic variability of HIV-1 in female sex workers from Argentina María A Pando, Lindsay M Eyzaguirre, Gladys Carrion, Silvia M Montano, José L Sanchez, Jean K Carr, and María M Avila Retrovirology. 2007; 4: 58. Published online 2007 August 13. doi: 10.1186/1742-4690-4-58.PMCID: PMC1971708 HIV-1 sequence evolution in vivo after superinfection with three viral strains Karolina Kozaczynska, Marion Cornelissen, Peter Reiss, Fokla Zorgdrager, and Antoinette C van der Kuyl Retrovirology. 2007; 4: 59. Published online 2007 August 23. doi: 10.1186/1742-4690-4-59.PMCID: PMC2020475 Unintegrated HIV-1 provides an inducible and functional reservoir in untreated and highly active antiretroviral therapy-treated patients Gaël Petitjean, Yassine Al Tabaa, Edouard Tuaillon, Clement Mettling, Vincent Baillat, Jacques Reynes, Michel Segondy, and Jean Pierre Vendrell Retrovirology. 2007; 4: 60. Published online 2007 August 29. doi: 10.1186/1742-4690-4-60.PMCID: PMC2048509 Targeting APOBEC3A to the viral nucleoprotein complex confers antiviral activity Ritu Goila-Gaur, Mohammad A Khan, Eri Miyagi, Sandra Kao, and Klaus Strebel Retrovirology. 2007; 4: 61. Published online 2007 August 29. doi: 10.1186/1742-4690-4-61.PMCID: PMC2018723 Human immunodeficiency virus type 1 specific cytotoxic T lymphocyte responses in Chinese infected with HIV-1 B'/C Recombinant (CRF07_BC) Jianping Chen, Kunxue Hong, Mingming Jia, Hongwei Liu, Yuanzhi Zhang, Sha Liu, Xiaoqing Zhang, Hongjing Zhao, Hong Peng, Pengfei Ma, Hui Xing, Yuhua Ruan, Katie L Williams, Xu G Yu, Marcus Altfeld, Bruce D Walker, and Yiming Shao Retrovirology. 2007; 4: 62. Published online 2007 August 30. doi: 10.1186/1742-4690-4-62.PMCID: PMC2018724 The HIV RNA setpoint theory revisited Ronald B Geskus, Maria Prins, Jean-Baptiste Hubert, Frank Miedema, Ben Berkhout, Christine Rouzioux, Jean-Francois Delfraissy, and Laurence Meyer Retrovirology. 2007; 4: 65. Published online 2007 September 21. doi: 10.1186/1742-4690-4-65.PMCID: PMC2206052 Both TRIM5α and TRIMCyp have only weak antiviral activity in canine D17 cells Julie Bérubé, Amélie Bouchard, and Lionel Berthoux Retrovirology. 2007; 4: 68. Published online 2007 September 24. doi: 10.1186/1742-4690-4-68.PMCID: PMC2064933 Characterization of the invariable residue 51 mutations of human immunodeficiency virus type 1 capsid protein on in vitro CA assembly and infectivity Samir Abdurahman, Masoud Youssefi, Stefan Höglund, and Anders Vahlne Retrovirology. 2007; 4: 69. Published online 2007 September 28. doi: 10.1186/1742-4690-4-69.PMCID: PMC2064932 Human Immunodeficiency Virus Type 1 Nef protein modulates the lipid composition of virions and host cell membrane microdomains Britta Brügger, Ellen Krautkrämer, Nadine Tibroni, Claudia E Munte, Susanne Rauch, Iris Leibrecht, Bärbel Glass, Sebastian Breuer, Matthias Geyer, Hans-Georg Kräusslich, Hans Robert Kalbitzer, Felix T Wieland, and Oliver T Fackler Retrovirology. 2007; 4: 70. Published online 2007 October 1. doi: 10.1186/1742-4690-4-70.PMCID: PMC2065869 Detection, characterization and regulation of antisense transcripts in HIV-1 Sébastien Landry, Marilène Halin, Sylvain Lefort, Brigitte Audet, Catherine Vaquero, Jean-Michel Mesnard, and Benoit Barbeau Retrovirology. 2007; 4: 71. Published online 2007 October 2. doi: 10.1186/1742-4690-4-71.PMCID: PMC2099442 Rapid spread of mouse mammary tumor virus in cultured human breast cells Stanislav Indik, Walter H Günzburg, Pavel Kulich, Brian Salmons, and Francoise Rouault Retrovirology. 2007; 4: 73. Published online 2007 October 11. doi: 10.1186/1742-4690-4-73.PMCID: PMC2169256 Requirements for the selective degradation of CD4 receptor molecules by the human immunodeficiency virus type 1 Vpu protein in the endoplasmic reticulum Julie Binette, Mathieu Dubé, Johanne Mercier, Dalia Halawani, Martin Latterich, and Éric A Cohen Retrovirology. 2007; 4: 75. Published online 2007 October 15. doi: 10.1186/1742-4690-4-75.PMCID: PMC2170451 The contribution of peroxynitrite generation in HIV replication in human primary macrophages Stefano Aquaro, Carolina Muscoli, Alessandro Ranazzi, Michela Pollicita, Teresa Granato, Laura Masuelli, Andrea Modesti, Carlo-Federico Perno, and Vincenzo Mollace Retrovirology. 2007; 4: 76. Published online 2007 October 21. doi: 10.1186/1742-4690-4-76.PMCID: PMC2173904 Human immunodeficiency virus integrase inhibitors efficiently suppress feline immunodeficiency virus replication in vitro and provide a rationale to redesign antiretroviral treatment for feline AIDS Andrea Savarino, Mauro Pistello, Daniela D'Ostilio, Elisa Zabogli, Fabiana Taglia, Fabiola Mancini, Stefania Ferro, Donatella Matteucci, Laura De Luca, Maria Letizia Barreca, Alessandra Ciervo, Alba Chimirri, Massimo Ciccozzi, and Mauro Bendinelli Retrovirology. 2007; 4: 79. Published online 2007 October 30. doi: 10.1186/1742-4690-4-79.PMCID: PMC2244644 The dimerization domain of HIV-1 viral infectivity factor Vif is required to block virion incorporation of APOBEC3G James H Miller, Vlad Presnyak, and Harold C Smith Retrovirology. 2007; 4: 81. Published online 2007 November 24. doi: 10.1186/1742-4690-4-81.PMCID: PMC2222665 Antibody microarray analysis of cell surface antigens on CD4+ and CD8+ T cells from HIV+ individuals correlates with disease stages Jing Qin Wu, Bin Wang, Larissa Belov, Jeremy Chrisp, Jenny Learmont, Wayne B Dyer, John Zaunders, Anthony L Cunningham, Dominic E Dwyer, and Nitin K Saksena Retrovirology. 2007; 4: 83. Published online 2007 November 26. doi: 10.1186/1742-4690-4-83.PMCID: PMC2212635 Localization of HIV-1 Vpr to the nuclear envelope: Impact on Vpr functions and virus replication in macrophages Guillaume Jacquot, Erwann Le Rouzic, Annie David, Julie Mazzolini, Jérôme Bouchet, Serge Bouaziz, Florence Niedergang, Gianfranco Pancino, and Serge Benichou Retrovirology. 2007; 4: 84. Published online 2007 November 26. doi: 10.1186/1742-4690-4-84.PMCID: PMC2211753 Mortality associated with HIV-1, HIV-2, and HTLV-I single and dual infections in a middle-aged and older population in Guinea-Bissau Birgitta Holmgren, Zacarias da Silva, Pernille Vastrup, Olav Larsen, Sören Andersson, Henrik Ravn, and Peter Aaby Retrovirology. 2007; 4: 85. Published online 2007 November 27. doi: 10.1186/1742-4690-4-85.PMCID: PMC2222662 Compartmentalization of the gut viral reservoir in HIV-1 infected patients Guido van Marle, M John Gill, Dione Kolodka, Leah McManus, Tannika Grant, and Deirdre L Church Retrovirology. 2007; 4: 87. Published online 2007 December 4. doi: 10.1186/1742-4690-4-87.PMCID: PMC2217557 Asn 362 in gp120 contributes to enhanced fusogenicity by CCR5-restricted HIV-1 envelope glycoprotein variants from patients with AIDS Jasminka Sterjovski, Melissa J Churchill, Anne Ellett, Lachlan R Gray, Michael J Roche, Rebecca L Dunfee, Damian FJ Purcell, Nitin Saksena, Bin Wang, Secondo Sonza, Steven L Wesselingh, Ingrid Karlsson, Eva-Maria Fenyo, Dana Gabuzda, Anthony L Cunningham, and Paul R Gorry Retrovirology. 2007; 4: 89. Published online 2007 December 12. doi: 10.1186/1742-4690-4-89.PMCID: PMC2225424 Dimerisation of HIV-2 genomic RNA is linked to efficient RNA packaging, normal particle maturation and viral infectivity Anne L'Hernault, Jane S Greatorex, R Anthony Crowther, and Andrew ML Lever Retrovirology. 2007; 4: 90. Published online 2007 December 13. doi: 10.1186/1742-4690-4-90.PMCID: PMC2222663 HTLV-1 HBZ cooperates with JunD to enhance transcription of the human telomerase reverse transcriptase gene (hTERT) Anne-Sophie Kuhlmann, Julien Villaudy, Louis Gazzolo, Marc Castellazzi, Jean-Michel Mesnard, and Madeleine Duc Dodon Retrovirology. 2007; 4: 92. Published online 2007 December 13. doi: 10.1186/1742-4690-4-92.PMCID: PMC2235888 Differential resistance to cell entry by porcine endogenous retrovirus subgroup A in rodent species Giada Mattiuzzo, Magda Matouskova, and Yasuhiro Takeuchi Retrovirology. 2007; 4: 93. Published online 2007 December 14. doi: 10.1186/1742-4690-4-93.PMCID: PMC2241639 Role of the long cytoplasmic domain of the SIV Env glycoprotein in early and late stages of infection Andrei N Vzorov, Armin Weidmann, Natalia L Kozyr, Vladimir Khaoustov, Boris Yoffe, and Richard W Compans Retrovirology. 2007; 4: 94. Published online 2007 December 14. doi: 10.1186/1742-4690-4-94.PMCID: PMC2242802 Ubiquitination of HTLV-I Tax in response to DNA damage regulates nuclear complex formation and nuclear export Michael L Gatza, Tajhal Dayaram, and Susan J Marriott Retrovirology. 2007; 4: 95. Published online 2007 December 14. doi: 10.1186/1742-4690-4-95.PMCID: PMC2234431 Design of a trans protease lentiviral packaging system that produces high titer virus Karen A Westerman, Zhujun Ao, Éric A Cohen, and Philippe Leboulch Retrovirology. 2007; 4: 96. Published online 2007 December 28. doi: 10.1186/1742-4690-4-96.PMCID: PMC2259377 Reviews New pandemics: HIV and AIDS, HCV and chronic hepatitis, Influenza virus and flu Anne Gatignol, Jean Dubuisson, Mark A Wainberg, Éric A Cohen, and Jean-Luc Darlix Retrovirology. 2007; 4: 8. Published online 2007 February 1. doi: 10.1186/1742-4690-4-8.PMCID: PMC1800864 Mechanisms of leukemogenesis induced by bovine leukemia virus: prospects for novel anti-retroviral therapies in human Nicolas Gillet, Arnaud Florins, Mathieu Boxus, Catherine Burteau, Annamaria Nigro, Fabian Vandermeers, Hervé Balon, Amel-Baya Bouzar, Julien Defoiche, Arsène Burny, Michal Reichert, Richard Kettmann, and Luc Willems Retrovirology. 2007; 4: 18. Published online 2007 March 16. doi: 10.1186/1742-4690-4-18.PMCID: PMC1839114 Centrosome and retroviruses: The dangerous liaisons Philippe V Afonso, Alessia Zamborlini, Ali Saïb, and Renaud Mahieux Retrovirology. 2007; 4: 27. Published online 2007 April 14. doi: 10.1186/1742-4690-4-27.PMCID: PMC1855351 Genetic and phylogenetic evolution of HIV-1 in a low subtype heterogeneity epidemic: the Italian example Luigi Buonaguro, Maria Tagliamonte, Maria Lina Tornesello, and Franco M Buonaguro Retrovirology. 2007; 4: 34. Published online 2007 May 21. doi: 10.1186/1742-4690-4-34.PMCID: PMC1892567 The control of viral infection by tripartite motif proteins and cyclophilin A Greg J Towers Retrovirology. 2007; 4: 40. Published online 2007 June 12. doi: 10.1186/1742-4690-4-40.PMCID: PMC1906832 Host factors influencing susceptibility to HIV infection and AIDS progression Juan Lama and Vicente Planelles Retrovirology. 2007; 4: 52. Published online 2007 July 25. doi: 10.1186/1742-4690-4-52.PMCID: PMC1978541 Pathogenicity and immunogenicity of attenuated, nef-deleted HIV-1 strains in vivo Paul R Gorry, Dale A McPhee, Erin Verity, Wayne B Dyer, Steven L Wesselingh, Jennifer Learmont, John S Sullivan, Michael Roche, John J Zaunders, Dana Gabuzda, Suzanne M Crowe, John Mills, Sharon R Lewin, Bruce J Brew, Anthony L Cunningham, and Melissa J Churchill Retrovirology. 2007; 4: 66. Published online 2007 September 23. doi: 10.1186/1742-4690-4-66.PMCID: PMC2075523 Identifying HIV-1 dual infections Antoinette C van der Kuyl and Marion Cornelissen Retrovirology. 2007; 4: 67. Published online 2007 September 24. doi: 10.1186/1742-4690-4-67.PMCID: PMC2045676 HIV-1 drug-resistance and drug-dependence Chris Baldwin and Ben Berkhout Retrovirology. 2007; 4: 78. Published online 2007 October 25. doi: 10.1186/1742-4690-4-78.PMCID: PMC2129100 Short Reports Overlapping enhancer/promoter and transcriptional termination signals in the lentiviral long terminal repeat Qing Yang, Aurore Lucas, Sodany Son, and Lung-Ji Chang Retrovirology. 2007; 4: 4. Published online 2007 January 22. doi: 10.1186/1742-4690-4-4.PMCID: PMC1802088 Retroviral activation of the mir-106a microRNA cistron in T lymphoma Amy M Lum, Bruce B Wang, Lauri Li, Namitha Channa, Gabor Bartha, and Matthias Wabl Retrovirology. 2007; 4: 5. Published online 2007 January 25. doi: 10.1186/1742-4690-4-5.PMCID: PMC1794537 Mutation in the loop C-terminal to the cyclophilin A binding site of HIV-1 capsid protein disrupts proper virus assembly and infectivity Samir Abdurahman, Stefan Höglund, Anders Höglund, and Anders Vahlne Retrovirology. 2007; 4: 19. Published online 2007 March 19. doi: 10.1186/1742-4690-4-19.PMCID: PMC1832212 Fully-spliced HIV-1 RNAs are reverse transcribed with similar efficiencies as the genomic RNA in virions and cells, but more efficiently in AZT-treated cells Laurent Houzet, Zakia Morichaud, and Marylène Mougel Retrovirology. 2007; 4: 30. Published online 2007 May 2. doi: 10.1186/1742-4690-4-30.PMCID: PMC1868081 A real-time view of the TAR:Tat:P-TEFb complex at HIV-1 transcription sites Dorothée Molle, Paolo Maiuri, Stéphanie Boireau, Edouard Bertrand, Anna Knezevich, Alessandro Marcello, and Eugenia Basyuk Retrovirology. 2007; 4: 36. Published online 2007 May 30. doi: 10.1186/1742-4690-4-36.PMCID: PMC1904240 Complete suppression of viral gene expression is associated with the onset and progression of lymphoid malignancy: observations in Bovine Leukemia Virus-infected sheep Makram Merimi, Pavel Klener, Maud Szynal, Yvette Cleuter, Claude Bagnis, Pierre Kerkhofs, Arsène Burny, Philippe Martiat, and Anne Van den Broeke Retrovirology. 2007; 4: 51. Published online 2007 July 23. doi: 10.1186/1742-4690-4-51.PMCID: PMC1948017 Centrosomal pre-integration latency of HIV-1 in quiescent cells Alessia Zamborlini, Jacqueline Lehmann-Che, Emmanuel Clave, Marie-Lou Giron, Joëlle Tobaly-Tapiero, Philippe Roingeard, Stéphane Emiliani, Antoine Toubert, Hugues de Thé, and Ali Saïb Retrovirology. 2007; 4: 63. Published online 2007 September 10. doi: 10.1186/1742-4690-4-63.PMCID: PMC2014762 Downregulation of CD94/NKG2A inhibitory receptors on CD8+ T cells in HIV infection is more pronounced in subjects with detected viral load than in their aviraemic counterparts Mustapha Zeddou, Souad Rahmouni, Arnaud Vandamme, Nathalie Jacobs, Frédéric Frippiat, Philippe Leonard, Nicole Schaaf-Lafontaine, Dolores Vaira, Jacques Boniver, and Michel Moutschen Retrovirology. 2007; 4: 72. Published online 2007 October 10. doi: 10.1186/1742-4690-4-72.PMCID: PMC2098781 Isolated HIV-1 core is active for reverse transcription David Warrilow, Deborah Stenzel, and David Harrich Retrovirology. 2007; 4: 77. Published online 2007 October 24. doi: 10.1186/1742-4690-4-77.PMCID: PMC2169257 Optimal design and validation of antiviral siRNA for targeting HIV-1 Yuki Naito, Kyoko Nohtomi, Toshinari Onogi, Rie Uenishi, Kumiko Ui-Tei, Kaoru Saigo, and Yutaka Takebe Retrovirology. 2007; 4: 80. Published online 2007 November 8. doi: 10.1186/1742-4690-4-80.PMCID: PMC2204037 Activation of HIV-1 expression and replication by cGMP dependent protein kinase type 1-β (PKG1β) Jia Hai Lee, Venkat RK Yedavalli, and Kuan-Teh Jeang Retrovirology. 2007; 4: 91. Published online 2007 December 13. doi: 10.1186/1742-4690-4-91.PMCID: PMC2222664 Correction Inhibition of HIV Env binding to cellular receptors by monoclonal antibody 2G12 as probed by Fc-tagged gp120 James M Binley, Stacie Ngo-Abdalla, Penny Moore, Michael Bobardt, Udayan Chatterji, Philippe Gallay, Dennis R Burton, Ian A Wilson, John H Elder, and Aymeric de Parseval Retrovirology. 2007; 4: 23. Published online 2007 March 28. doi: 10.1186/1742-4690-4-23.PMCID: PMC1847835 Corrects: James M Binley, et al. Inhibition of HIV Env binding to cellular receptors by monoclonal antibody 2G12 as probed by Fc-tagged gp120. Retrovirology. 2006; 3: 39. |