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Volume 1;  2004
Commentaries
HIV CTL escape: at what cost?
Stephen M Smith
Retrovirology. 2004; 1: 8. Published online 2004 May 12. doi: 10.1186/1742-4690-1-8.
PMCID: PMC419725
Multi-faceted, multi-versatile microarray: simultaneous detection of many viruses and their expression profiles
Biehuoy Shieh and Ching Li
Retrovirology. 2004; 1: 11. Published online 2004 May 26. doi: 10.1186/1742-4690-1-11.
PMCID: PMC420498
The expanding role of Tax in transcription
Cynthia de la Fuente and Fatah Kashanchi
Retrovirology. 2004; 1: 19. Published online 2004 July 30. doi: 10.1186/1742-4690-1-19.
PMCID: PMC506788
HIV-1 Vif and APOBEC3G: Multiple roads to one goal
Joao Goncalves and Mariana Santa-Marta
Retrovirology. 2004; 1: 28. Published online 2004 September 21. doi: 10.1186/1742-4690-1-28.
PMCID: PMC521195
Within you, without you: HIV-1 Rev and RNA export
Andrew I Dayton
Retrovirology. 2004; 1: 35. Published online 2004 October 29. doi: 10.1186/1742-4690-1-35.
PMCID: PMC526764
HTLV-1 p30II: selective repressor of gene expression
Patrick L Green
Retrovirology. 2004; 1: 40. Published online 2004 November 24. doi: 10.1186/1742-4690-1-40.
PMCID: PMC543446
Editorials
Retrovirology and young Turks...
Kuan-Teh Jeang
Retrovirology. 2004; 1: 1. Published online 2004 February 27. doi: 10.1186/1742-4690-1-1.
PMCID: PMC416570
Mohmmar Qadaffi, Open Access, and Retrovirology
Kuan-Teh Jeang
Retrovirology. 2004; 1: 24. Published online 2004 September 3. doi: 10.1186/1742-4690-1-24.
PMCID: PMC516792
Hypothesis
Pre-exposure chemoprophylaxis for HIV: It is time
Stephen M Smith
Retrovirology. 2004; 1: 16. Published online 2004 July 6. doi: 10.1186/1742-4690-1-16.
PMCID: PMC478616
Research
Establishment of a novel CCR5 and CXCR4 expressing CD4+ cell line which is highly sensitive to HIV and suitable for high-throughput evaluation of CCR5 and CXCR4 antagonists
Katrien Princen, Sigrid Hatse, Kurt Vermeire, Erik De Clercq, and Dominique Schols
Retrovirology. 2004; 1: 2. Published online 2004 March 8. doi: 10.1186/1742-4690-1-2.
PMCID: PMC416571
Evolution of the HIV-1 envelope glycoproteins with a disulfide bond between gp120 and gp41
Rogier W Sanders, Martijn M Dankers, Els Busser, Michael Caffrey, John P Moore, and Ben Berkhout
Retrovirology. 2004; 1: 3. Published online 2004 March 9. doi: 10.1186/1742-4690-1-3.
PMCID: PMC416572
Increased mortality associated with HTLV-II infection in blood donors: a prospective cohort study
Jennie R Orland, Baoguang Wang, David J Wright, Catharie C Nass, George Garratty, James W Smith, Bruce Newman, Donna M Smith, Edward L Murphy, and For the HOST Investigators
Retrovirology. 2004; 1: 4. Published online 2004 March 24. doi: 10.1186/1742-4690-1-4.
PMCID: PMC419722
A murine leukemia virus with Cre-LoxP excisible coding sequences allowing superinfection, transgene delivery, and generation of host genomic deletions
Clifford L Wang, J Graeme Hodgson, Tiffany Malek, Finn Skou Pedersen, and Matthias Wabl
Retrovirology. 2004; 1: 5. Published online 2004 April 5. doi: 10.1186/1742-4690-1-5.
PMCID: PMC419723
The role of cyclin D2 and p21/waf1 in human T-cell leukemia virus type 1 infected cells
Kylene Kehn, Longwen Deng, Cynthia de la Fuente, Katharine Strouss, Kaili Wu, Anil Maddukuri, Shanese Baylor, Robyn Rufner, Anne Pumfery, Maria Elena Bottazzi, and Fatah Kashanchi
Retrovirology. 2004; 1: 6. Published online 2004 April 13. doi: 10.1186/1742-4690-1-6.
PMCID: PMC420262
Two discrete events, human T-cell leukemia virus type I Tax oncoprotein expression and a separate stress stimulus, are required for induction of apoptosis in T-cells
Takefumi Kasai and Kuan-Teh Jeang
Retrovirology. 2004; 1: 7. Published online 2004 May 6. doi: 10.1186/1742-4690-1-7.
PMCID: PMC419724
Use of a multi-virus array for the study of human viral and retroviral pathogens: gene expression studies and ChIP-chip analysis
Elodie Ghedin, Anne Pumfery, Cynthia de la Fuente, Karen Yao, Naomi Miller, Vincent Lacoste, John Quackenbush, Steven Jacobson, and Fatah Kashanchi
Retrovirology. 2004; 1: 10. Published online 2004 May 25. doi: 10.1186/1742-4690-1-10.
PMCID: PMC442135
Trans-dominant cellular inhibition of DC-SIGN-mediated HIV-1 transmission
Li Wu, Thomas D Martin, Yoon-Chi Han, Sabine KJ Breun, and Vineet N KewalRamani
Retrovirology. 2004; 1: 14. Published online 2004 June 28. doi: 10.1186/1742-4690-1-14.
PMCID: PMC446230
The sequence of the CA-SP1 junction accounts for the differential sensitivity of HIV-1 and SIV to the small molecule maturation inhibitor 3-O-{3',3'-dimethylsuccinyl}-betulinic acid
Jing Zhou, Chin Ho Chen, and Christopher Aiken
Retrovirology. 2004; 1: 15. Published online 2004 June 29. doi: 10.1186/1742-4690-1-15.
PMCID: PMC479704
Viral and immunological factors associated with breast milk transmission of SIV in rhesus macaques
Angela M Amedee, Jenna Rychert, Nedra Lacour, Lynn Fresh, and Marion Ratterree
Retrovirology. 2004; 1: 17. Published online 2004 July 14. doi: 10.1186/1742-4690-1-17.
PMCID: PMC493286
Specific TATAA and bZIP requirements suggest that HTLV-I Tax has transcriptional activity subsequent to the assembly of an initiation complex
Yick-Pang Ching, Abel CS Chun, King-Tung Chin, Zhi-Qing Zhang, Kuan-Teh Jeang, and Dong-Yan Jin
Retrovirology. 2004; 1: 18. Published online 2004 July 30. doi: 10.1186/1742-4690-1-18.
PMCID: PMC509288
Analysis of HIV-1 Vpr determinants responsible for cell growth arrest in Saccharomyces cerevisiae
Xiao-Jian Yao, Nicole Rougeau, Ghislaine Duisit, Julie Lemay, and Éric A Cohen
Retrovirology. 2004; 1: 21. Published online 2004 August 16. doi: 10.1186/1742-4690-1-21.
PMCID: PMC516023
Production of infectious human immunodeficiency virus type 1 does not require depletion of APOBEC3G from virus-producing cells
Sandra Kao, Eri Miyagi, Mohammad A Khan, Hiroaki Takeuchi, Sandrine Opi, Ritu Goila-Gaur, and Klaus Strebel
Retrovirology. 2004; 1: 27. Published online 2004 September 17. doi: 10.1186/1742-4690-1-27.
PMCID: PMC520834
Low autocrine interferon beta production as a gene therapy approach for AIDS: Infusion of interferon beta-engineered lymphocytes in macaques chronically infected with SIVmac251
Wilfried Gay, Evelyne Lauret, Bertrand Boson, Jérome Larghero, Franck Matheux, Sophie Peyramaure, Véronique Rousseau, Dominique Dormont, Edward De Maeyer, and Roger Le Grand
Retrovirology. 2004; 1: 29. Published online 2004 September 25. doi: 10.1186/1742-4690-1-29.
PMCID: PMC523856
Isolation of suppressor genes that restore retrovirus susceptibility to a virus-resistant cell line
Guangxia Gao and Stephen P Goff
Retrovirology. 2004; 1: 30. Published online 2004 September 28. doi: 10.1186/1742-4690-1-30.
PMCID: PMC524375
Reduced proviral loads during primo-infection of sheep by Bovine Leukemia virus attenuated mutants
Christophe Debacq, Maria Teresa Sanchez Alcaraz, Franck Mortreux, Pierre Kerkhofs, Richard Kettmann, and Luc Willems
Retrovirology. 2004; 1: 31. Published online 2004 October 5. doi: 10.1186/1742-4690-1-31.
PMCID: PMC526217
Identification of endogenous retroviral reading frames in the human genome
Palle Villesen, Lars Aagaard, Carsten Wiuf, and Finn Skou Pedersen
Retrovirology. 2004; 1: 32. Published online 2004 October 11. doi: 10.1186/1742-4690-1-32.
PMCID: PMC524368
The connection domain in reverse transcriptase facilitates the in vivo annealing of tRNALys3 to HIV-1 genomic RNA
Shan Cen, Meijuan Niu, and Lawrence Kleiman
Retrovirology. 2004; 1: 33. Published online 2004 October 19. doi: 10.1186/1742-4690-1-33.
PMCID: PMC524520
Seroprevalence of simian immunodeficiency virus in wild and captive born Sykes' monkeys (Cercopithecus mitis) in Kenya
Brett R Ellis, Elephas Munene, Debra Elliott, James Robinson, Moses G Otsyula, and Scott F Michael
Retrovirology. 2004; 1: 34. Published online 2004 October 28. doi: 10.1186/1742-4690-1-34.
PMCID: PMC535803
Alteration of T cell immunity by lentiviral transduction of human monocyte-derived dendritic cells
Xiaochuan Chen, Jin He, and Lung-Ji Chang
Retrovirology. 2004; 1: 37. Published online 2004 November 1. doi: 10.1186/1742-4690-1-37.
PMCID: PMC534092
Assessment of FIV-C infection of cats as a function of treatment with the protease inhibitor, TL-3
Sohela de Rozières, Christina H Swan, Dennis A Sheeter, Karen J Clingerman, Ying-Chuan Lin, Salvador Huitron-Resendiz, Steven Henriksen, Bruce E Torbett, and John H Elder
Retrovirology. 2004; 1: 38. Published online 2004 November 19. doi: 10.1186/1742-4690-1-38.
PMCID: PMC535546
Human T lymphotropic virus type-1 p30II alters cellular gene expression to selectively enhance signaling pathways that activate T lymphocytes
Bindhu Michael, Amrithraj M Nair, Hajime Hiraragi, Lei Shen, Gerold Feuer, Kathleen Boris-Lawrie, and Michael D Lairmore
Retrovirology. 2004; 1: 39. Published online 2004 November 23. doi: 10.1186/1742-4690-1-39.
PMCID: PMC538277
HTLV-1 and -2 envelope SU subdomains and critical determinants in receptor binding
Felix J Kim, Nicolas Manel, Edith N Garrido, Carine Valle, Marc Sitbon, and Jean-Luc Battini
Retrovirology. 2004; 1: 41. Published online 2004 December 2. doi: 10.1186/1742-4690-1-41.
PMCID: PMC539286
HIV-1 nef suppression by virally encoded microRNA
Shinya Omoto, Masafumi Ito, Yutaka Tsutsumi, Yuko Ichikawa, Harumi Okuyama, Ebiamadon Andi Brisibe, Nitin K Saksena, and Yoichi R Fujii
Retrovirology. 2004; 1: 44. Published online 2004 December 15. doi: 10.1186/1742-4690-1-44.
PMCID: PMC544868
Inhibition of HIV-1 replication in primary human monocytes by the IκB-αS32/36A repressor of NF-κB
Camillo Palmieri, Francesca Trimboli, Antimina Puca, Giuseppe Fiume, Giuseppe Scala, and Ileana Quinto
Retrovirology. 2004; 1: 45. Published online 2004 December 21. doi: 10.1186/1742-4690-1-45.
PMCID: PMC544834
Modulating HIV-1 replication by RNA interference directed against human transcription elongation factor SPT5
Yueh-Hsin Ping, Chia-ying Chu, Hong Cao, Jean-Marc Jacque, Mario Stevenson, and Tariq M Rana
Retrovirology. 2004; 1: 46. Published online 2004 December 27. doi: 10.1186/1742-4690-1-46.
PMCID: PMC545048
Reviews
Early steps of retrovirus replicative cycle
Sébastien Nisole and Ali Saïb
Retrovirology. 2004; 1: 9. Published online 2004 May 14. doi: 10.1186/1742-4690-1-9.
PMCID: PMC421752
Apoptosis of uninfected cells induced by HIV envelope glycoproteins
Barbara Ahr, Véronique Robert-Hebmann, Christian Devaux, and Martine Biard-Piechaczyk
Retrovirology. 2004; 1: 12. Published online 2004 June 23. doi: 10.1186/1742-4690-1-12.
PMCID: PMC446229
HIV-1 gene expression: lessons from provirus and non-integrated DNA
Yuntao Wu
Retrovirology. 2004; 1: 13. Published online 2004 June 25. doi: 10.1186/1742-4690-1-13.
PMCID: PMC449739
Role of Tax protein in human T-cell leukemia virus type-I leukemogenicity
Inbal Azran, Yana Schavinsky-Khrapunsky, and Mordechai Aboud
Retrovirology. 2004; 1: 20. Published online 2004 August 13. doi: 10.1186/1742-4690-1-20.
PMCID: PMC514576
The retroviral RNA dimer linkage: different structures may reflect different roles
Jane Greatorex
Retrovirology. 2004; 1: 22. Published online 2004 August 18. doi: 10.1186/1742-4690-1-22.
PMCID: PMC516450
Is HIV-1 RNA dimerization a prerequisite for packaging? Yes, no, probably?
Rodney S Russell, Chen Liang, and Mark A Wainberg
Retrovirology. 2004; 1: 23. Published online 2004 September 2. doi: 10.1186/1742-4690-1-23.
PMCID: PMC516451
Retroviruses 2004: Review of the 2004 Cold Spring Harbor Retroviruses conference
Eric O Freed and Susan R Ross
Retrovirology. 2004; 1: 25. Published online 2004 September 9. doi: 10.1186/1742-4690-1-25.
PMCID: PMC519032
Short Reports
Identification of the 15FRFG domain in HIV-1 Gag p6 essential for Vpr packaging into the virion
Henghu Zhu, Heng Jian, and Ling-Jun Zhao
Retrovirology. 2004; 1: 26. Published online 2004 September 13. doi: 10.1186/1742-4690-1-26.
PMCID: PMC521086
SIVdrl detection in captive mandrills: are mandrills infected with a third strain of simian immunodeficiency virus?
Antoinette C van der Kuyl, Remco van den Burg, Mark J Hoyer, Rob A Gruters, Albert DME Osterhaus, and Ben Berkhout
Retrovirology. 2004; 1: 36. Published online 2004 November 1. doi: 10.1186/1742-4690-1-36.
PMCID: PMC529309
Alterations in the expression of DEAD-box and other RNA binding proteins during HIV-1 replication
Vyjayanthi Krishnan and Steven L Zeichner
Retrovirology. 2004; 1: 42. Published online 2004 December 8. doi: 10.1186/1742-4690-1-42.
PMCID: PMC543576
HIV-1 encoded candidate micro-RNAs and their cellular targets
Yamina Bennasser, Shu-Yun Le, Man Lung Yeung, and Kuan-Teh Jeang
Retrovirology. 2004; 1: 43. Published online 2004 December 15. doi: 10.1186/1742-4690-1-43.
PMCID: PMC544590
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