| | This journal provides immediate access to some articles. In This Issue Proc Natl Acad Sci U S A. 2005 June 14; 102(24): 8393–8394. doi: 10.1073/iti2405102.PMCID: PMC1150871 Commentaries Historical influences on community ecology Harry W. Greene PMCID: PMC1150854 Uterine sensing of the embryo Daniel D. Carson PMCID: PMC1150858 Bird genes give new insights into the origins of lipid antigen presentation Steven A. Porcelli PMCID: PMC1150850 The selective advantage of microbial fratricide M. S. Gilmore and W. Haas PMCID: PMC1150870 Perspective Nobel Lecture: Asymptotic freedom: From paradox to paradigm Frank Wilczek PMCID: PMC1150826 Physical Sciences Chemistry Dynamic reassembly of peptide RADA16 nanofiber scaffold Hidenori Yokoi, Takatoshi Kinoshita, and Shuguang Zhang PMCID: PMC1150805 Biological Sciences Agricultural Sciences From the Cover:
A nicotinic acetylcholine receptor mutation conferring target-site resistance to imidacloprid in Nilaparvata lugens (brown planthopper) Zewen Liu, Martin S. Williamson, Stuart J. Lansdell, Ian Denholm, Zhaojun Han, and Neil S. Millar PMCID: PMC1150837 Concurrent use of transgenic plants expressing a single and two Bacillus thuringiensis genes speeds insect adaptation to pyramided plants Jian-Zhou Zhao, Jun Cao, Hilda L. Collins, Sarah L. Bates, Richard T. Roush, Elizabeth D. Earle, and Anthony M. Shelton PMCID: PMC1150809 Prehistoric contacts over the Straits of Gibraltar indicated by genetic analysis of Iberian Bronze Age cattle Cecilia Anderung, Abigail Bouwman, Per Persson, José Miguel Carretero, Ana Isabel Ortega, Rengert Elburg, Colin Smith, Juan Luis Arsuaga, Hans Ellegren, and Anders Götherström PMCID: PMC1150856 Anthropology Anthropoid primates from the Oligocene of Pakistan (Bugti Hills): Data on early anthropoid evolution and biogeography Laurent Marivaux, Pierre-Olivier Antoine, Syed Rafiqul Hassan Baqri, Mouloud Benammi, Yaowalak Chaimanee, Jean-Yves Crochet, Dario de Franceschi, Nayyer Iqbal, Jean-Jacques Jaeger, Grégoire Métais, Ghazala Roohi, and Jean-Loup Welcomme PMCID: PMC1150860 Applied Biological Sciences Gelatinase A and membrane-type matrix metalloproteinases 1 and 2 are responsible for follicle rupture during ovulation in the medaka Katsueki Ogiwara, Naoharu Takano, Masakazu Shinohara, Masahiro Murakami, and Takayuki Takahashi PMCID: PMC1150835 Biochemistry Disruption of the mouse inositol 1,3,4,5,6-pentakisphosphate 2-kinase gene, associated lethality, and tissue distribution of 2-kinase expression John Verbsky, Kory Lavine, and Philip W. Majerus PMCID: PMC1150868 An essential role for an inositol polyphosphate multikinase, Ipk2, in mouse embryogenesis and second messenger production Joshua P. Frederick, Deidre Mattiske, Jessica A. Wofford, Louis C. Megosh, Li Yin Drake, Shean-Tai Chiou, Brigid L. M. Hogan, and John D. York PMCID: PMC1150869 Signal peptide–chaperone interactions on the twin-arginine protein transport pathway Kostas Hatzixanthis, Thomas A. Clarke, Arthur Oubrie, David J. Richardson, Raymond J. Turner, and Frank Sargent PMCID: PMC1143606 A general method for greatly improving the affinity of antibodies by using combinatorial libraries Arvind Rajpal, Nurten Beyaz, Lauric Haber, Guido Cappuccilli, Helena Yee, Ramesh R. Bhatt, Toshihiko Takeuchi, Richard A. Lerner, and Roberto Crea PMCID: PMC1143585 Polyglutamine-expanded ataxin-7 inhibits STAGA histone acetyltransferase activity to produce retinal degeneration Vikas B. Palhan, Shiming Chen, Guang-Hua Peng, Agneta Tjernberg, Armin M. Gamper, Yuxin Fan, Brian T. Chait, Albert R. La Spada, and Robert G. Roeder PMCID: PMC1150862 Polyglutamine-expanded spinocerebellar ataxia-7 protein disrupts normal SAGA and SLIK histone acetyltransferase activity Stacey J. McMahon, Marilyn G. Pray-Grant, David Schieltz, John R. Yates, III, and Patrick A. Grant PMCID: PMC1150861 Neuroglobin, nitric oxide, and oxygen: Functional pathways and conformational changes Maurizio Brunori, Alessandro Giuffrè, Karin Nienhaus, G. Ulrich Nienhaus, Francesca Maria Scandurra, and Beatrice Vallone PMCID: PMC1150806 Structural basis of the Sir1–origin recognition complex interaction in transcriptional silencing Zhonggang Hou, Douglas A. Bernstein, Catherine A. Fox, and James L. Keck PMCID: PMC1150864 How human neuroblastoma cells make morphine Chotima Boettcher, Monika Fellermeier, Christian Boettcher, Birgit Dräger, and Meinhart H. Zenk PMCID: PMC1150847 From the Cover:
Insights into Lafora disease: Malin is an E3 ubiquitin ligase that ubiquitinates and promotes the degradation of laforin Matthew S. Gentry, Carolyn A. Worby, and Jack E. Dixon PMCID: PMC1150849 Engineered single-chain dimeric streptavidins with an unexpected strong preference for biotin-4-fluorescein Filiz M. Aslan, Yong Yu, Scott C. Mohr, and Charles R. Cantor PMCID: PMC1150841 Experimental tests of a homology model for OxlT, the oxalate transporter of Oxalobacter formigenes Qiang Yang, Xicheng Wang, Liwen Ye, Mark Mentrikoski, Elham Mohammadi, Young-Mog Kim, and Peter C. Maloney PMCID: PMC1150865 Structural basis for origin recognition complex 1 protein–silence information regulator 1 protein interaction in epigenetic silencing Hao-Chi Hsu, Bruce Stillman, and Rui-Ming Xu PMCID: PMC1150838 S-nitrosylation of Hsp90 promotes the inhibition of its ATPase and endothelial nitric oxide synthase regulatory activities Antonio Martínez-Ruiz, Laura Villanueva, Cecilia González de Orduña, Daniel López-Ferrer, María Ángeles Higueras, Carlos Tarín, Ignacio Rodríguez-Crespo, Jesús Vázquez, and Santiago Lamas PMCID: PMC1150803 Biophysics Specificity of cell–cell adhesion by classical cadherins: Critical role for low-affinity dimerization through β-strand swapping Chien Peter Chen, Shoshana Posy, Avinoam Ben-Shaul, Lawrence Shapiro, and Barry H. Honig PMCID: PMC1150851 BRCA2 BRC motifs bind RAD51–DNA filaments Vitold E. Galkin, Fumiko Esashi, Xiong Yu, Shixin Yang, Stephen C. West, and Edward H. Egelman PMCID: PMC1150802 Actin polymerization kinetics, cap structure, and fluctuations Dimitrios Vavylonis, Qingbo Yang, and Ben O'Shaughnessy PMCID: PMC1150824 Cell Biology Cytoplasmic LEK1 is a regulator of microtubule function through its interaction with the LIS1 pathway Victor Soukoulis, Samyukta Reddy, Ryan D. Pooley, Yuanyi Feng, Christopher A. Walsh, and David M. Bader PMCID: PMC1150833 HEXIM1 forms a transcriptionally abortive complex with glucocorticoid receptor without involving 7SK RNA and positive transcription elongation factor b Noriaki Shimizu, Rika Ouchida, Noritada Yoshikawa, Tetsuya Hisada, Hajime Watanabe, Kensaku Okamoto, Masatoshi Kusuhara, Hiroshi Handa, Chikao Morimoto, and Hirotoshi Tanaka PMCID: PMC1150813 Gene expression patterns define key transcriptional events in cell-cycle regulation by cAMP and protein kinase A Alexander C. Zambon, Lingzhi Zhang, Simon Minovitsky, Joan R. Kanter, Shyam Prabhakar, Nathan Salomonis, Karen Vranizan, Inna Dubchak, Bruce R. Conklin, and Paul A. Insel PMCID: PMC1150853 Small-molecule inhibition of proteasome and aggresome function induces synergistic antitumor activity in multiple myeloma Teru Hideshima, James E. Bradner, Jason Wong, Dharminder Chauhan, Paul Richardson, Stuart L. Schreiber, and Kenneth C. Anderson PMCID: PMC1150844 The NF1 tumor suppressor critically regulates TSC2 and mTOR Cory M. Johannessen, Elizabeth E. Reczek, Marianne F. James, Hilde Brems, Eric Legius, and Karen Cichowski PMCID: PMC1142482 Developmental Biology From the Cover:
Uterine Wnt/β-catenin signaling is required for implantation Othman A. Mohamed, Maud Jonnaert, Cassandre Labelle-Dumais, Kazuki Kuroda, Hugh J. Clarke, and Daniel Dufort PMCID: PMC1150820 Inhibition of Stat3 activation in the endometrium prevents implantation: A nonsteroidal approach to contraception Rob D. Catalano, Martin H. Johnson, Elizabeth A. Campbell, D. Stephen Charnock-Jones, Stephen K. Smith, and Andrew M. Sharkey PMCID: PMC1150834 Evolution Evolutionary analysis of the well characterized endo16 promoter reveals substantial variation within functional sites James P. Balhoff and Gregory A. Wray PMCID: PMC1150811 Thrombin inhibitors identified by computer-assisted multiparameter design Daniel Riester, Frank Wirsching, Gabriela Salinas, Martina Keller, Michael Gebinoga, Stefan Kamphausen, Christian Merkwirth, Ruediger Goetz, Martin Wiesenfeldt, Jörg Stürzebecher, Wolfram Bode, Rainer Friedrich, Marcel Thürk, and Andreas Schwienhorst PMCID: PMC1150832 Genetics Global and Hox-specific roles for the MLL1 methyltransferase Matthew G. Guenther, Richard G. Jenner, Brett Chevalier, Tatsuya Nakamura, Carlo M. Croce, Eli Canaani, and Richard A. Young PMCID: PMC1150839 Linear-After-The-Exponential (LATE)-PCR: Primer design criteria for high yields of specific single-stranded DNA and improved real-time detection Kenneth E. Pierce, J. Aquiles Sanchez, John E. Rice, and Lawrence J. Wangh PMCID: PMC1150831 Development of a unique system for spatiotemporal and lineage-specific gene expression in mice Hsiao-Man Ivy Yu, Bo Liu, Shang-Yi Chiu, Frank Costantini, and Wei Hsu PMCID: PMC1150815 Identification of coexpressed gene clusters in a comparative analysis of transcriptome and proteome in mouse tissues T. Mijalski, A. Harder, T. Halder, M. Kersten, M. Horsch, T. M. Strom, H. V. Liebscher, F. Lottspeich, M. Hrabě de Angelis, and J. Beckers PMCID: PMC1143582 Variation in DISC1 affects hippocampal structure and function and increases risk for schizophrenia Joseph H. Callicott, Richard E. Straub, Lukas Pezawas, Michael F. Egan, Venkata S. Mattay, Ahmad R. Hariri, Beth A. Verchinski, Andreas Meyer-Lindenberg, Rishi Balkissoon, Bhaskar Kolachana, Terry E. Goldberg, and Daniel R. Weinberger PMCID: PMC1143583 Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets Staffan Persson, Hairong Wei, Jennifer Milne, Grier P. Page, and Christopher R. Somerville PMCID: PMC1142401 Variation in efficiency of DNA mismatch repair at different sites in the yeast genome Joshua D. Hawk, Lela Stefanovic, Jayne C. Boyer, Thomas D. Petes, and Rosann A. Farber PMCID: PMC1150857 Interaction between genetic susceptibility and early-life environmental exposure determines tumor-suppressor-gene penetrance Jennifer D. Cook, Barbara J. Davis, Sheng-Li Cai, J. Carl Barrett, Claudio J. Conti, and Cheryl Lyn Walker PMCID: PMC1150843 UV irradiation stimulates histone acetylation and chromatin remodeling at a repressed yeast locus Yachuan Yu, Yumin Teng, Hairong Liu, Simon H. Reed, and Raymond Waters PMCID: PMC1150825 Immunology Different mutation signatures in DNA polymerase η- and MSH6-deficient mice suggest separate roles in antibody diversification Stella A. Martomo, William W. Yang, Robert P. Wersto, Tsuyoshi Ohkumo, Yuji Kondo, Masayuki Yokoi, Chikahide Masutani, Fumio Hanaoka, and Patricia J. Gearhart PMCID: PMC1150827 Survival adjustment of mature dendritic cells by IL-15 Sigrid P. Dubois, Thomas A. Waldmann, and Jürgen R. Müller PMCID: PMC1150852 From the Cover:
Two CD1 genes map to the chicken MHC, indicating that CD1 genes are ancient and likely to have been present in the primordial MHC Jan Salomonsen, Maria Rathmann Sørensen, Denise A. Marston, Sally L. Rogers, Trevor Collen, Andrew van Hateren, Adrian L. Smith, Richard K. Beal, Karsten Skjødt, and Jim Kaufman PMCID: PMC1150808 From the Cover:
Characterization of two avian MHC-like genes reveals an ancient origin of the CD1 family Marcia M. Miller, Carren Wang, Emilio Parisini, Ricardo D. Coletta, Ronald M. Goto, Stella Y. Lee, Duarte C. Barral, Maria Townes, Carme Roura-Mir, Heide L. Ford, Michael B. Brenner, and Christopher C. Dascher PMCID: PMC1150814 Golgi targeting of human guanylate-binding protein-1 requires nucleotide binding, isoprenylation, and an IFN-γ-inducible cofactor Nir Modiano, Yanping E. Lu, and Peter Cresswell PMCID: PMC1150846 The primary mechanism of the IL-10-regulated antiinflammatory response is to selectively inhibit transcription Peter J. Murray PMCID: PMC1150817 Medical Sciences Myocardial regeneration by activation of multipotent cardiac stem cells in ischemic heart failure Konrad Urbanek, Daniele Torella, Farooq Sheikh, Antonella De Angelis, Daria Nurzynska, Furio Silvestri, C. Alberto Beltrami, Rossana Bussani, Antonio P. Beltrami, Federico Quaini, Roberto Bolli, Annarosa Leri, Jan Kajstura, and Piero Anversa PMCID: PMC1150816 Gene transfer to human joints: Progress toward a gene therapy of arthritis Christopher H. Evans, Paul D. Robbins, Steven C. Ghivizzani, Mary Chester Wasko, Matthew M. Tomaino, Richard Kang, Thomas A. Muzzonigro, Molly Vogt, Elaine M. Elder, Theresa L. Whiteside, Simon C. Watkins, and James H. Herndon PMCID: PMC1150836 The dense core transmembrane vesicle protein IA-2 is a regulator of vesicle number and insulin secretion Shin-ichi Harashima, Anne Clark, Michael R. Christie, and Abner Louis Notkins PMCID: PMC1150807 Microbiology From the Cover:
Competence-programmed predation of noncompetent cells in the human pathogen Streptococcus pneumoniae: Genetic requirements Sébastien Guiral, Tim J. Mitchell, Bernard Martin, and Jean-Pierre Claverys PMCID: PMC1150823 Variant surface glycoprotein RNA interference triggers a precytokinesis cell cycle arrest in African trypanosomes Karen Sheader, Sue Vaughan, James Minchin, Katie Hughes, Keith Gull, and Gloria Rudenko PMCID: PMC1150830 Virulent Coxiella burnetii does not activate human dendritic cells: Role of lipopolysaccharide as a shielding molecule Jeffrey G. Shannon, Dale Howe, and Robert A. Heinzen PMCID: PMC1150828 Imaging individual retroviral fusion events: From hemifusion to pore formation and growth Gregory B. Melikyan, Richard J. O. Barnard, Levon G. Abrahamyan, Walther Mothes, and John A. T. Young PMCID: PMC1150829 Nef from pathogenic simian immunodeficiency virus is a negative factor for vaccinia virus Kenneth S. Chan, Paulo H. Verardi, Fatema A. Legrand, and Tilahun D. Yilma PMCID: PMC1142211 Neuroscience Detection of glutamate release from neurons by genetically encoded surface-displayed FRET nanosensors Sakiko Okumoto, Loren L. Looger, Kristina D. Micheva, Richard J. Reimer, Stephen J Smith, and Wolf B. Frommer PMCID: PMC1143584 Activator of G protein signaling 3 regulates opiate activation of protein kinase A signaling and relapse of heroin-seeking behavior Lina Yao, Krista McFarland, Peidong Fan, Zhan Jiang, Yuichiro Inoue, and Ivan Diamond PMCID: PMC1142483 Glutamatergic reinnervation through peripheral nerve graft dictates assembly of glutamatergic synapses at rat skeletal muscle Giorgio Brunelli, PierFranco Spano, Sergio Barlati, Bruno Guarneri, Alessandro Barbon, Roberto Bresciani, and Marina Pizzi PMCID: PMC1142481 Pharmacology Nitric oxide synthase II suppresses the growth and metastasis of human cancer regardless of its up-regulation of protumor factors Xiangdong Le, Daoyan Wei, Suyun Huang, Jack R. Lancaster, Jr., and Keping Xie PMCID: PMC1150810 Selective modification of alternative splicing by indole derivatives that target serine-arginine-rich protein splicing factors Johann Soret, Nadia Bakkour, Sophie Maire, Sébastien Durand, Latifa Zekri, Mathieu Gabut, Weronika Fic, Gilles Divita, Christian Rivalle, Daniel Dauzonne, Chi Hung Nguyen, Philippe Jeanteur, and Jamal Tazi PMCID: PMC1150812 Plant Biology Intermittent pollen-tube growth in pistils of alders (Alnus) Akiko Sogo and Hiroshi Tobe PMCID: PMC1150840 Psychology Visual memory needs categories Henrik Olsson and Leo Poom PMCID: PMC1150822 Social Sciences Psychology Reading depends on writing, in Chinese Li Hai Tan, John A. Spinks, Guinevere F. Eden, Charles A. Perfetti, and Wai Ting Siok PMCID: PMC1150863 Correction Proc Natl Acad Sci U S A. 2005 June 14; 102(24): 8786–8787. doi: 10.1073/pnas.0503166102.PMCID: PMC1150842 Corrects: Jin T. E. Lim, et al. Cyclin-dependent kinase 6 associates with the androgen receptor and enhances its transcriptional activity in prostate cancer cells. Proc Natl Acad Sci U S A. 2005 April 5; 102(14): 5156–5161. |
