HomeResearchExtramural ResearchThe Large-Scale Genome Sequencing Program Approved Sequencing Targets

Approved Sequencing Targets

The Large-Scale Genome Sequencing Program Sequencing Program Priorities Instructions for Submitting a Proposal to Sequence a New Target Genome Approved Sequencing Targets BAC Library Proposals

Annual Receipt Dates are: January 10 and July 10

Status Approved Sequencing Targets

Please note: Actual projects approved for sequencing may be different from what is in the detailed proposals. To sort the table by column, click on the link in the header.

Project Name Common Name Scientific Name Taxonomy Target Sequencing Group Project Status modENCODE Comparative Genomics Fruit Fly Drosophila eugracilis Invertebrate Draft Assembly Not Started Evolution of the Proteome Hagfish Eptatretus burgeri Non-mammalian Vertebrate Draft Assembly Not Started Uncloned, mapped autosomal Mendelian diseases Human Homo sapiens Mammal See Hyperlink See Hyperlink X-linked disorders Human Homo sapiens Mammal See Hyperlink See Hyperlink Allelic Spectrum of Common Disease Human Homo sapiens Mammal See Hyperlink See Hyperlink Evolution of the Proteome Skate Raja erinacea Non-mammalian Vertebrate Draft Assembly Not Started Spirotrich Ciliate Spirotrich Ciliate Oxytricha trifallax [micronucleus + equivalent macronucleus sequences] Protist Draft Assembly Not Started Evolution of the Proteome Spotted Gar Lepisosteus oculatus Non-mammalian Vertebrate Draft Assembly Not Started Tetrahymena Tetrahymena Tetrahymena thermophila Protist Draft Assembly Not Started Cat Cat Felis catus Mammal Low Coverage (~2X) Agencourt Completed Fruit Fly Fruit Fly Drosophila ananassae Invertebrate Draft Assembly Agencourt Completed Fruit Fly Fruit Fly Drosophila erecta Invertebrate Draft Assembly Agencourt Completed Fruit Fly Fruit Fly Drosophila grimshawi Invertebrate Draft Assembly Agencourt Completed Fruit Fly Fruit Fly Drosophila mojavensis Invertebrate Draft Assembly Agencourt Completed Fruit Fly Fruit Fly Drosophila virilis Invertebrate Draft Assembly Agencourt Completed Peromyscus Peromyscus californicus Mammal Low Coverage (~2X) BCM-HGSC Not Started Peromyscus Peromyscus leucopus Mammal Low Coverage (~2X) BCM-HGSC Not Started Peromyscus Peromyscus maniculatus Mammal Draft Sequence BCM-HGSC Not Started Peromyscus Peromyscus polionotus Mammal Low Coverage (~2X) BCM-HGSC Not Started Amoeba Amoeba Acanthamoeba castellanii Protist Draft Assembly BCM-HGSC In Process Multiple Mammalian Genomes for Comparative Annotation Armadillo, Nine-Banded Dasypus novemcinctus Mammal Draft Assembly BCM-HGSC In Process Additional Primate Sequencing Baboon Papio hamadryas Mammal Draft Assembly BCM-HGSC In Process Beetle, Red Flour Beetle, Red Flour Tribolium castaneum Invertebrate Draft Assembly BCM-HGSC Completed Multiple Mammalian Y Chromosomes Cow Bos taurus Mammal Genome refinement BCM-HGSC WUGSC In Process Cow Cow Bos taurus Mammal Draft Assembly BCM-HGSC Completed Multiple Mammalian Genomes for Comparative Annotation Dolphin Tursiops truncates Mammal Low Coverage (~2X) BCM-HGSC In Process Top-up of Remaining 2X Mammals Dolphin Tursiops truncates Mammal Draft Assembly BCM-HGSC Not Started modENCODE Comparative Genomics Fruit Fly Drosophila biarmipes Invertebrate Draft Assembly BCM-HGSC Not Started modENCODE Comparative Genomics Fruit Fly Drosophila bipectinata Invertebrate Draft Assembly BCM-HGSC Not Started modENCODE Comparative Genomics Fruit Fly Drosophila elegans Invertebrate Draft Assembly BCM-HGSC Not Started modENCODE Comparative Genomics Fruit Fly Drosophila ficusphila Invertebrate Draft Assembly BCM-HGSC Not Started modENCODE Comparative Genomics Fruit Fly Drosophila kikkawai Invertebrate Draft Assembly BCM-HGSC Not Started modENCODE Comparative Genomics Fruit Fly Drosophila melanogaster, OregonR Invertebrate Draft Assembly BCM-HGSC Not Started Drosophila Genetic Reference Panel Fruit Fly Drosophila melanogaster Invertebrate Draft coverage of 192 lines BCM-HGSC Not Started Fruit Fly Fruit Fly Drosophila pseudoobscura Invertebrate Draft Assembly BCM-HGSC Completed modENCODE Comparative Genomics Fruit Fly Drosophila rhopaloa Invertebrate Draft Assembly BCM-HGSC Not Started modENCODE Comparative Genomics Fruit Fly Drosophila takahashii Invertebrate Draft Assembly BCM-HGSC Not Started Ecdysozoan Sequencing Geophilimorph Centipede Strigamia maritima Invertebrate Draft Assembly BCM-HGSC Not Started Gibbon Gibbon Nomascus leucogenys Mammal Draft Assembly BCM-HGSC WUGSC In Process Additional Primate Sequencing Gibbon Nomascus lucogenys Mammal Targeted BAC finishing BCM-HGSC WUGSC In Process Honey Bee Honey Bee Apis mellifera Invertebrate Draft Assembly BCM-HGSC Completed Honey Bee Honey Bee Apis mellifera Invertebrate Genome refinement BCM-HGSC Completed Multiple Mammalian Genomes for Comparative Annotation Hyrax Procavia capensis Mammal Low Coverage (~2X) BCM-HGSC In Process Top-up of Remaining 2X Mammals Hyrax Procavia capensis Mammal Draft Assembly BCM-HGSC Not Started Multiple Mammalian Genomes for Comparative Annotation Kangaroo Rat Dipodomys sp. Mammal Low Coverage (~2X) BCM-HGSC In Process Additional Primate Sequencing Lemur, Mouse Microcebus murinus Mammal Draft Assembly BCM-HGSC Not Started Macaque, Rhesus Macaque Macaca mulatta Mammal Draft Assembly BCM-HGSC TIGR/JTC WUGSC Completed Macaque, Rhesus Macaque, Rhesus Macaca mulatta Mammal Targeted BAC finishing BCM-HGSC WUGSC In Process Multiple Mammalian Y Chromosomes Macaque, Rhesus Macaca mulatta Mammal Genome refinement BCM-HGSC WUGSC In Process Multiple Mammalian Y Chromosomes Marmoset Callithrix jacchus Mammal Genome refinement BCM-HGSC WUGSC Not Started Multiple Mammalian Genomes for Comparative Annotation Megabat Pteropus vampyrus Mammal Low Coverage (~2X) BCM-HGSC In Process Multiple Mammalian Y Chromosomes Opossum, Laboratory Monodelphis domestica Mammal Genome refinement BCM-HGSC WUGSC In Process Additional Primate Sequencing Orangutan Pongo pygmaeus Mammal Targeted BAC finishing BCM-HGSC WUGSC In Process Additional Primate Sequencing Orangutan Pongo pygmaeus Mammal Draft Assembly BCM-HGSC WUGSC In Process Top-up of Remaining 2X Mammals Pangolin Manis pentadactyla Mammal Draft Assembly BCM-HGSC Not Started Pea Aphid Pea Aphid Acyrothosyphon pisum Invertebrate Draft Assembly BCM-HGSC Completed Multiple Mammalian Y Chromosomes Rat Rattus norvegicus Mammal Genome refinement BCM-HGSC WUGSC Not Started Rat Rat Rattus norvegicus Mammal Genome refinement BCM-HGSC In Process Rat Rat Rattus norvegicus Mammal Finished Sequence BCM-HGSC Completed Rat SNPs Rat SNPs Rattus norvegicus Mammal SNP discovery BCM-HGSC Completed Sand Flies Sand Fly Lutzomiya longipalpis Invertebrate BAC library construction; BAC-end sequencing BCM-HGSC In Process Sea Urchin Sea Urchin Strongylocentrotus purpuratus Invertebrate Draft Assembly BCM-HGSC Completed Wallaby, Tammar Wallaby, Tammar Macropus eugenii Mammal Low Coverage (~2X) BCM-HGSC AGRF In Process Wasp, Parasitoid Wasp, Parasitoid Nasonia giraulti Invertebrate Draft Assembly BCM-HGSC In Process Wasp, Parasitoid Wasp, Parasitoid Nasonia longicornis Invertebrate Draft Assembly BCM-HGSC In Process Wasp, Parasitoid Wasp, Parasitoid Nasonia vitripennis Invertebrate Draft Assembly BCM-HGSC Completed Worm, Acorn Worm, Acorn Saccoglossus kowalesvskii Invertebrate Draft Assembly BCM-HGSC In Process Fruit Fly Fruit Fly Drosophila melanogaster Invertebrate Draft Assembly BDGP BCM-HGSC Completed Comparative Analysis of Plasmodium Vivax Protist 8X coverage of 6 species/strains; 40k ESTs BI/MIT Not Started Comprehensive Sequencing Proposal for Plasmodium Protist Draft sequence and ESTs of multiple isolates of P. falciparum, P. vivax, and related species for comparative and model system studies BI/MIT Not Started Fungal Genome Initiative II Agaricus bisporus Fungus Draft Assembly BI/MIT Completed Origins of Multicellularity Project Allomyces macrogynus Fungus Draft Assembly BI/MIT In Process Origins of Multicellularity Project Amastigomonas sp. Protist Draft Assembly BI/MIT In Process Origins of Multicellularity Project Amoebidium parasiticum Protist Low Coverage (~2X) BI/MIT In Process Fungal Genome Initiative I Aspergillus nidulans Fungus Draft Assembly BI/MIT Completed Tilapia Cichlid Astatotilapia burtoni Non-mammalian Vertebrate Low Coverage BI/MIT In Process Fungal Genome Initiative II Candida albicans Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative III Candida guilliermondii Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative III Candida lusitaniae Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative II Candida tropicalis Fungus Draft Assembly BI/MIT Completed Origins of Multicellularity Project Capsaspora owczarzaki Protist Draft Assembly BI/MIT In Process Fungal Genome Initiative III Chaetomium globosum Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative I Coccidioides immitis Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative I Coprinus cinereus Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative III Cryptococcus neoformans, serotype B Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative I Cryptococcus neoformans, serotype A Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative III Histoplasma capsulatum Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative II Lodderomyces elongisporus Fungus Draft Assembly BI/MIT Completed Tilapia Cichlid Metriaclima zebra Non-mammalian Vertebrate Low Coverage BI/MIT In Process Dermatophyte fungi Microsporum canis Fungus Draft Assembly BI/MIT In Process Dermatophyte fungi Microsporum gypseum Fungus Draft Assembly BI/MIT In Process Origins of Multicellularity Project Mortierella verticulata Fungus Low Coverage (~2X) BI/MIT In Process Origins of Multicellularity Project Nuclearia simplex Protist Draft Assembly BI/MIT In Process Tilapia Cichlid Oreochromis niloticus Non-mammalian Vertebrate Draft Assembly BI/MIT In Process Tilapia Cichlid Paralibidichromis chilotes Non-mammalian Vertebrate Low Coverage BI/MIT In Process Fungal Genome Initiative I Pneumocystis carinii (human and mouse pathogens) Fungus Draft Assembly BI/MIT On Hold Fungal Genome Initiative III Podospora anserina Fungus Draft Assembly BI/MIT In Process Fungal Genome Initiative I Rhizopus oryzae Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative II Saccharomyces cerevisiae RM11-1A Fungus Draft Assembly BI/MIT Completed Origins of Multicellularity Project Salpingoeca or Codosiga sp. Protist Draft Assembly BI/MIT In Process Origins of Multicellularity Project Schaeroforma arctica Protist Draft Assembly BI/MIT In Process Fungal Genome Initiative IV Schizosaccharomyces japonicus Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative IV Schizosaccharomyces octosporus Fungus Draft Assembly BI/MIT Completed Origins of Multicellularity Project Spizellomyces punctatus Fungus Low Coverage (~2X) BI/MIT In Process Origins of Multicellularity Project Stephanoeca or Acanthocoepis sp. Protist Low Coverage (~2X) BI/MIT In Process Dermatophyte fungi Trichophyton equinum Fungus Draft Assembly BI/MIT In Process Dermatophyte fungi Trichophyton rubram Fungus Draft Assembly BI/MIT In Process Dermatophyte fungi Trichophyton tonsurans Fungus Draft Assembly BI/MIT In Process Fungal Genome Initiative III Uncinocarpus reesei Fungus Draft Assembly BI/MIT Completed Fungal Genome Initiative I Ustilago maydis Fungus Draft Assembly BI/MIT Completed Ecdysozoan Sequencing Amphipod Crustacean Jassa slatteryi Invertebrate Draft Assembly BI/MIT Not Started Multiple Mammalian Genomes for Comparative Annotation Armadillo, Nine-Banded Dasypus novemcinctus Mammal Low Coverage (~2X) BI/MIT Completed Multiple Mammalian Genomes for Comparative Annotation Bushbaby Otolemur garnetti Mammal Low Coverage (~2X) BI/MIT Completed Additional Primate Sequencing Bushbaby Otolemur garnetti Mammal Draft Assembly BI/MIT In Process Fungal Genome Initiative IV Chytrid Fungus Batrachochytrium dendrobatidis Fungus Draft Assembly BI/MIT Completed Evolution of the Proteome Coelacanth Latimeria chalumnae Non-mammalian Vertebrate Draft Assembly BI/MIT In Process Dog Dog Canis familiaris Mammal Draft Assembly BI/MIT Completed Dog Dog Canis familiaris Mammal Genome refinement BI/MIT In Process Multiple Mammalian Genomes for Comparative Annotation Elephant Shrew Elephantulus sp. Mammal Low Coverage (~2X) BI/MIT On Hold Multiple Mammalian Genomes for Comparative Annotation Elephant, African Savannah Loxodonta africana africana Mammal Draft Assembly BI/MIT In Process Multiple Mammalian Genomes for Comparative Annotation Elephant, African Savannah Loxodonta africana Mammal Low Coverage (~2X) BI/MIT Completed Ferret Ferret Mustela putorius furo Mammal Low Coverage (~2X) BI/MIT Not Started Fruit Fly Fruit Fly Drosophila persimilis Invertebrate Draft Assembly BI/MIT Completed Fruit Fly Fruit Fly Drosophila sechellia Invertebrate Draft Assembly BI/MIT Completed Multiple Mammalian Genomes for Comparative Annotation Guinea Pig Cavia porcellus Mammal Draft Assembly BI/MIT Completed Multiple Mammalian Genomes for Comparative Annotation Guinea Pig Cavia porcellus Mammal Low Coverage (~2X) BI/MIT Completed Multiple Mammalian Genomes for Comparative Annotation Hedgehog, European Erinaceus europaeus Mammal Low Coverage (~2X) BI/MIT Completed Top-up of Remaining 2X Mammals Hedgehog, European Erinaceus europeaus Mammal Draft Assembly BI/MIT Not Started Multiple Mammalian Genomes for Comparative Annotation Horse Equus caballus Mammal Low Coverage (~2X) BI/MIT Completed Multiple Mammalian Genomes for Comparative Annotation Horse Equus caballus Mammal Draft Assembly BI/MIT Completed Human Structural Variation Human Homo sapiens Mammal Structural Variation BI/MIT BCM-HGSC WUGSC Agencourt JCVI See Hyperlink Top-up of Remaining 2X Mammals Kangaroo Rat Dipodomys sp. Mammal Draft Assembly BI/MIT Not Started Multiple Mammalian Genomes for Comparative Annotation Lemur, Mouse Microcebus murinus Mammal Low Coverage (~2X) BI/MIT Completed Multiple Mammalian Genomes for Comparative Annotation Little brown bat Myotis lucifugus Mammal Draft Assembly BI/MIT In Process Multiple Mammalian Genomes for Comparative Annotation Little brown bat Myotis lucifugus Mammal Low Coverage (~2X) BI/MIT Completed Anolis lizard Lizard, Anolis Anolis carolinensis Non-mammalian Vertebrate Full draft genome BI/MIT Completed Multiple Mammalian Genomes for Comparative Annotation Mole Cryptomys sp. Mammal Low Coverage (~2X) BI/MIT On Hold Mouse Mouse Mus musculus Mammal Finished Sequence BI/MIT WUGSC SI BCM-HGSC Completed Mouse Resequencing Mouse Mus musculus Mammal 5 Mb targeted sequencing per line, eventually several hundred lines BI/MIT Not Started Opossum, Laboratory Opossum, Laboratory Monodelphis domestica Mammal Draft Assembly BI/MIT Completed Top-up of Remaining 2X Mammals Pika Ochotona princeps Mammal Draft Assembly BI/MIT Not Started Multiple Mammalian Genomes for Comparative Annotation Pika Ochotona sp. Mammal Low Coverage (~2X) BI/MIT Completed Pufferfish Pufferfish Tetraodon nigroviridis Non-mammalian Vertebrate Draft Assembly BI/MIT Completed Multiple Mammalian Genomes for Comparative Annotation Rabbit Oryctolagus cuniculus Mammal Draft Assembly BI/MIT In Process Multiple Mammalian Genomes for Comparative Annotation Rabbit Oryctolagus cuniculus Mammal Low Coverage (~2X) BI/MIT Completed Sea Slug Sea Slug Aplysia californica Invertebrate Draft Assembly BI/MIT In Process Sea Squirt Sea Squirt Ciona savignyi Invertebrate Draft Assembly BI/MIT Completed Multiple Mammalian Genomes for Comparative Annotation Shrew, European Common Sorex araneus Mammal Low Coverage (~2X) BI/MIT Completed Top-up of Remaining 2X Mammals Shrew, European Common Sorex araneus Mammal Draft Assembly BI/MIT Not Started Multiple Mammalian Genomes for Comparative Annotation Shrew, Tree Tupaia belangeri Mammal Low Coverage (~2X) BI/MIT Completed Multiple Mammalian Genomes for Comparative Annotation Squirrel Spermophilis tridecemlineatus Mammal Low Coverage (~2X) BI/MIT Completed Top-up of Remaining 2X Mammals Squirrel Spermophilis tridecemlineatus Mammal Draft Assembly BI/MIT Not Started Additional Primate Sequencing Squirrel Monkey Saimiri sp. Mammal Draft Assembly BI/MIT Not Started Stickleback, Threespine Stickleback, Threespine Gasterosteus aculeatus Non-mammalian Vertebrate Draft Assembly BI/MIT Completed Ecdysozoan Sequencing Tardigrade Hypsibius dujardini Invertebrate Draft Assembly BI/MIT Not Started Multiple Mammalian Genomes for Comparative Annotation Tenrec (Lesser Hedgehog) Echinops telfairi Mammal Low Coverage (~2X) BI/MIT Completed Top-up of Remaining 2X Mammals Tenrec, Lesser Hedgehog Echinops telfairi Mammal Draft Assembly BI/MIT Not Started Human Human Homo sapiens Mammal Finished Sequence Consortium Completed Louse, Body Louse, Body Pediculus humanus Invertebrate Draft Assembly JCVI Completed Mosquito Mosquito Anopheles gambiae, S strain Invertebrate Draft Assembly JCVI In Process Freshwater Polyp Freshwater Polyp Hydra magnipapillata Invertebrate Draft Assembly TIGR/JTC In Process Fruit Fly Fruit Fly Drosophila willistoni Invertebrate Draft Assembly TIGR/JTC Completed Pathogenomics of Trypanosomatid parasites Protist 10X coverage of 25 species/strains, finishing of 6, cDNAs for 8 WUGSC Not Started Nematode Heterorhabditis bacteriophora Invertebrate Draft Assembly WUGSC In Process Nematode Pristionchus pacificus Invertebrate Draft Assembly WUGSC In Process Trichinosis vector (human) Trichinella spiralis Invertebrate Genome refinement WUGSC In Process Trichinosis vector (human) Trichinella spiralis Invertebrate Draft Assembly WUGSC In Process Genome Analysis of Vectorial Capacity in Major Anopheles Vectors of Malaria Parasites Protist High quality assembly for 13 species; 200,000 EST of each species WUGSC In Process Multiple Mammalian Genomes for Comparative Annotation Alpaca Vicugna pacos Mammal Low Coverage (~2X) WUGSC In Process Top-up of Remaining 2X Mammals Alpaca Vicugna pacos Mammal Draft Assembly WUGSC Not Started Bonobo Bonobo Pan paniscus Mammal Fosmid-end Sequencing WUGSC Not Started Bug; chagas' Vector Bug; chagas' Vector Rhodnius prolixus Invertebrate Draft Assembly WUGSC In Process Multiple Mammalian Genomes for Comparative Annotation Cat Felis catus Mammal Draft Assembly WUGSC In Process Ecdysozoan Sequencing Chelicerate (Horseshoe Crab) Limulus polyphemus Invertebrate Draft Assembly WUGSC Not Started Chicken Chicken Gallus gallus Non-mammalian Vertebrate Draft Assembly WUGSC Completed Chicken Chicken Gallus gallus Non-mammalian Vertebrate Genome refinement WUGSC Completed Chimpanzee Chimpanzee Pan troglodytes Mammal Genome refinement WUGSC In Process Chimpanzee Chimpanzee Pan troglodytes Mammal Draft Assembly WUGSC BI/MIT Completed Choanoflagellate Choanoflagellate Monosiga ovata Protist Draft Assembly WUGSC Not Started Elephant Shark Elephant Shark Callorhinchus milii Non-mammalian Vertebrate Draft Assembly WUGSC In Process Fruit Fly Fruit Fly Drosophila mauritiana Invertebrate Feasibility sequencing** WUGSC Completed Fruit Fly Fruit Fly Drosophila simulans Invertebrate Draft Assembly WUGSC Completed Fruit Fly Fruit Fly Drosophila yakuba Invertebrate Draft Assembly WUGSC Completed Gibbon Gibbon Nomascus leucogenys Mammal BAC-end sequencing WUGSC In Process Lamprey, Sea Lamprey, Sea Petromyzon marinus Non-mammalian Vertebrate Draft Assembly WUGSC In Process Multiple Mammalian Genomes for Comparative Annotation Lemur, Flying Dermoptera sp. Mammal Low Coverage (~2X) WUGSC ON HOLD Top-up of Remaining 2X Mammals Lemur, Flying Dermoptera sp. Mammal Draft Assembly WUGSC Not Started Multiple Mammalian Genomes for Comparative Annotation Llama Llama sp. Mammal Low Coverage (~2X) WUGSC Cancelled due to unavailability of material Additional Primate Sequencing Macaque, Cynomolgous Macaca fascicularis Mammal Draft Assembly WUGSC Not Started Additional Primate Sequencing Marmoset Callithrix jacchus Mammal Targeted BAC finishing WUGSC BCM-HGSC In Process Marmoset Marmoset Callithrix jacchus Mammal Draft Assembly WUGSC BCM-HGSC In Process Top-up of Remaining 2X Mammals Megabat Pteropus vampyrus Mammal Draft Assembly WUGSC Not Started Mosquito Mosquito Anopheles gambiae, M strain Invertebrate Draft Assembly WUGSC Completed Evolution of the Proteome Painted Turtle Chrysemys picta Non-mammalian Vertebrate Draft Assembly WUGSC Not Started Multiple Mammalian Genomes for Comparative Annotation Pangolin Manis sp. Mammal Low Coverage (~2X) WUGSC ON HOLD Sequencing the Human Microbiome Pilot Metagenomic Sequencing of Human Intestinal Microbiome Bacteria Metagenomic sequencing WUGSC BCM-HGSC BI-MIT In Process Trichoplax Placazoan Trichoplax adhaerens Invertebrate Draft Assembly WUGSC Not Started Planarian Planarian Schmidtea mediterranea Invertebrate Draft Assembly WUGSC Completed Platypus, Duck-Billed Platypus, Duck-Billed Ornithorhynchus anatinus Mammal Draft Assembly WUGSC Completed Ecdysozoan Sequencing Priapulid Worm Priapulus caudatus Invertebrate Draft Assembly WUGSC In Process Roundworm Roundworm Caenorhabditis briggsae Invertebrate Draft Assembly WUGSC Completed Roundworm Roundworm Caenorhabditis elegans Invertebrate Finished Sequence WUGSC SI Completed Roundworm Roundworm Caenorhabditis japonica Invertebrate Draft Assembly WUGSC In Process Roundworm Roundworm Caenorhabditis n. sp. CB5161 Invertebrate Genome refinement WUGSC In Process Roundworm Roundworm Caenorhabditis n. sp. CB5161 Invertebrate Draft Assembly WUGSC In Process Roundworm Roundworm Caenorhabditis remanei Invertebrate Genome refinement WUGSC Completed Roundworm Roundworm Caenorhabditis remanei Invertebrate Draft Assembly WUGSC Completed modENCODE Comparative Genomics Roundworm Caenorhabditis sp.11 (JU1373) Invertebrate Draft Assembly WUGSC Not Started modENCODE Comparative Genomics Roundworm Caenorhabditis sp.7 (JU1199) Invertebrate Draft Assembly WUGSC Not Started modENCODE Comparative Genomics Roundworm Caenorhabditis sp.9 (JU1325) Invertebrate Draft Assembly WUGSC Not Started Sand Flies Sand Fly Phlebotomus papatasi Invertebrate BAC library construction; BAC-end sequencing WUGSC BCM-HGSC In Process Sequencing the Human Microbiome Sequencing of Cultivable Microbes from Human Gut Bacteria Draft reference genomes of 100 bacteria and archea strains from human gut WUGSC In Process Sequencing the Human Microbiome Sequencing of Cultivable Microbes from Human Gut and Vagina Bacteria Draft reference genomes of 200 bacteria and archea strains from human WUGSC BCM-HGSC BI-MIT In Process Multiple Mammalian Genomes for Comparative Annotation Shrew, Tree Tupaia belangeri Mammal Draft Assembly WUGSC In Process Slime Mold Slime Mold Physarum polycephalum Protist Draft Assembly WUGSC In Process Multiple Mammalian Genomes for Comparative Annotation Sloth Choloepus hoffmanni Mammal Low Coverage (~2X) WUGSC In Process Top-up of Remaining 2X Mammals Sloth Choloepus hoffmanni Mammal Draft Assembly WUGSC Not Started Snail, Freshwater Snail, Freshwater Biomphalaria glabrata (schistosomiasis vector) Invertebrate Draft Assembly WUGSC In Process Spirotrich Ciliate Spirotrich Ciliate Oxytricha trifallax [macronucleus] Protist Draft Assembly WUGSC In Process Strongylid Nematode Strongylid Nematode Ancylostoma caninum Invertebrate Draft Assembly WUGSC In Process Strongylid Nematode Strongylid Nematode Cooperia oncophora Invertebrate Draft Assembly WUGSC Not Started Strongylid Nematode Strongylid Nematode Dictyocaulus viviparus Invertebrate Draft Assembly WUGSC In Process Strongylid Nematode Strongylid Nematode Necator americanus Invertebrate Draft Assembly WUGSC In Process Strongylid Nematode Strongylid Nematode Nematodirus battus Invertebrate Draft Assembly WUGSC Not Started Strongylid Nematode Strongylid Nematode Nippostrongylus brasiliensis Invertebrate Draft Assembly WUGSC Not Started Strongylid Nematode Strongylid Nematode Oesophagostomum dentatum Invertebrate Draft Assembly WUGSC In Process Strongylid Nematode Strongylid Nematode Ostertagia ostertagii Invertebrate Draft Assembly WUGSC Not Started Strongylid Nematode Strongylid Nematode Teladorsagia circumcincta Invertebrate Draft Assembly WUGSC Not Started Strongylid Nematode Strongylid Nematode Trichostrongylus vitrinus Invertebrate Draft Assembly WUGSC Not Started Multiple Mammalian Genomes for Comparative Annotation Tarsier Tarsier syrichta Mammal Low Coverage (~2X) WUGSC In Process Additional Primate Sequencing Tarsier Tarsier syrichta Mammal Draft Assembly WUGSC In Process Vervet Vervet Chlorocebus aethiops Mammal Draft sequence; SNP resource WUGSC Not Started Multiple Strains of Yeast Yeast Saccharomyces cerevisiae Fungus 10 strains to full draft, 2-fold coverage up to 25 strains coverage WUGSC In Process Yeast Yeast Saccharomyces kluyveri Fungus Draft Assembly WUGSC Completed Zebra finch Zebra finch Taeniopygia guttata Non-mammalian Vertebrate Physical map WUGSC Completed Zebra finch Zebra finch Taeniopygia guttata Non-mammalian Vertebrate Draft Assembly WUGSC In Process

**Note: These organisms are not formally approved, but a small number of reads are sequenced to test for sequencing feasibility.

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Last Updated: January 14, 2009