| | Research Articles Modeling and analysis of competitive RT-PCR. A L Hayward, P J Oefner, S Sabatini, D B Kainer, C A Hinojos, and P A Doris PMCID: PMC147587 The environment of 5S rRNA in the ribosome: cross-links to the GTPase-associated area of 23S rRNA. P Sergiev, S Dokudovskaya, E Romanova, A Topin, A Bogdanov, R Brimacombe, and O Dontsova PMCID: PMC147597 Unique translational positioning of nucleosomes on synthetic DNAs. D J Fitzgerald and J N Anderson PMCID: PMC147625 Dnmt2 is not required for de novo and maintenance methylation of viral DNA in embryonic stem cells. M Okano, S Xie, and E Li PMCID: PMC147598 Distinct regions of U3 snoRNA interact at two sites within the 5' external transcribed spacer of pre-rRNAs in Trypanosoma brucei cells. T Hartshorne PMCID: PMC147592 DNA sequence analysis by MALDI mass spectrometry. F Kirpekar, E Nordhoff, L K Larsen, K Kristiansen, P Roepstorff, and F Hillenkamp PMCID: PMC147593 Sticky egyptians: a technique for assembling genes encoding constrained peptides of variable length. S J Palmer, M R Redfern, G C Smith, and J P Cox PMCID: PMC147621 RNA heptamers that direct RNA cleavage by mammalian tRNA 3' processing endoribonuclease. M Nashimoto, S Geary, M Tamura, and R Kaspar PMCID: PMC147582 SCP2: a major protein component of the axial elements of synaptonemal complexes of the rat. H H Offenberg, J A Schalk, R L Meuwissen, M van Aalderen, H A Kester, A J Dietrich, and C Heyting PMCID: PMC147596 Function of the C-terminal transactivation domain of human heat shock factor 2 is modulated by the adjacent negative regulatory segment. T Yoshima, T Yura, and H Yanagi PMCID: PMC147601 A method for analyzing the qualitative and quantitative aspects of gene expression: a transcriptional profile revealed for HeLa cells. A Ryo, N Kondoh, T Wakatsuki, A Hada, N Yamamoto, and M Yamamoto PMCID: PMC147617 Exonuclease IX of Escherichia coli. K M Shafritz, M Sandigursky, and W A Franklin PMCID: PMC147613 Single point mutations located outside the inter-monomer domains abolish trimerization of Schizosaccharomyces pombe PCNA. K Piard, G Baldacci, and I Tratner PMCID: PMC147618 Identification of a gene involved in the generation of 4-thiouridine in tRNA. E G Mueller, C J Buck, P M Palenchar, L E Barnhart, and J L Paulson PMCID: PMC147624 The (6-4) photoproduct of thymine-thymine induces targeted substitution mutations in mammalian cells. H Kamiya, S Iwai, and H Kasai PMCID: PMC147589 Simple, efficient protocol for enzymatic synthesis of uniformly 13C, 15N-labeled DNA for heteronuclear NMR studies. J E Masse, P Bortmann, T Dieckmann, and J Feigon PMCID: PMC147604 Activities of the Sex-lethal protein in RNA binding and protein:protein interactions. M Samuels, G Deshpande, and P Schedl PMCID: PMC147605 Characterization of a DEAD box ATPase/RNA helicase protein of Arabidopsis thaliana. M Okanami, T Meshi, and M Iwabuchi PMCID: PMC147611 DNA repair defect in poly(ADP-ribose) polymerase-deficient cell lines. C Trucco, F J Oliver, G de Murcia, and J Ménissier-de Murcia PMCID: PMC147627 Novel internucleotide 3'-NH-P(CH3)(O)-O-5' linkage. Oligo(deoxyribonucleoside methanephosphonamidates); synthesis, structure and hybridization properties. B Nawrot, M Boczkowska, M Wójcik, M Sochacki, S Kazmierski, and W J Stec PMCID: PMC147591 DNA-methyltransferase SsoII interaction with own promoter region binding site. I Shilov, V Tashlitsky, M Khodoun, S Vasil'ev, Y Alekseev, A Kuzubov, E Kubareva, and A Karyagina PMCID: PMC147609 Triple helices containing arabinonucleotides in the third (Hoogsteen) strand: effects of inverted stereochemistry at the 2'-position of the sugar moiety. A Noronha and M J Damha PMCID: PMC147614 GAGA factor binding to DNA via a single trinucleotide sequence element. R C Wilkins and J T Lis PMCID: PMC147603 Conformational properties of DNA dodecamers containing four tandem repeats of the CNG triplets. M Vorlícková, M Zimulová, J Kovanda, P Fojtík, and J Kypr PMCID: PMC147616 Characterisation of Bacillus stearothermophilus PcrA helicase: evidence against an active rolling mechanism. L E Bird, J A Brannigan, H S Subramanya, and D B Wigley PMCID: PMC147586 Thermodynamics of internal C.T mismatches in DNA. H T Allawi and J SantaLucia, Jr PMCID: PMC147606 DNA binding and transcription activation specificity of hepatocyte nuclear factor 4. J D Fraser, V Martinez, R Straney, and M R Briggs PMCID: PMC147588 Plant cytosolic tRNAHis possesses an exceptional C54 in the canonical TPsiC loop. K Akama, Y Yukawa, M Sugiura, and I Small PMCID: PMC147610 Selection and characterization of RNAs that relieve transcriptional interference in Escherichia coli. G A Soukup and J J Maher, 3rd PMCID: PMC147590 Mg2+ binding and structural stability of mature and in vitro synthesized unmodified Escherichia coli tRNAPhe. V Serebrov, K Vassilenko, N Kholod, H J Gross, and L Kisselev PMCID: PMC147623 Site-specific integration of Agrobacterium T-DNA in Arabidopsis thaliana mediated by Cre recombinase. A C Vergunst, L E Jansen, and P J Hooykaas PMCID: PMC147585 Inhibition of PNA triplex formation by N4-benzoylated cytosine. L Christensen, H F Hansen, T Koch, and P E Nielsen PMCID: PMC147602 Computational approaches to identify leucine zippers. E Bornberg-Bauer, E Rivals, and M Vingron PMCID: PMC147599 Sequence and expression characteristics of a nuclear-encoded chloroplast sigma factor from mustard (Sinapis alba). M Kestermann, S Neukirchen, K Kloppstech, and G Link PMCID: PMC147615 Multiple rounds of transcription by RNA polymerase II at covalently cross-linked templates. M N Szentirmay, M Musso, M W Van Dyke, and M Sawadogo PMCID: PMC147607 Novel salivary gland specific binding elements located in the PSP proximal enhancer core. P Svendsen, J Laursen, H Krogh-Pedersen, and J P Hjorth PMCID: PMC147626 Elements in abasic site recognition by the major human and Escherichia coli apurinic/apyrimidinic endonucleases. J P Erzberger, D Barsky, O D Schärer, M E Colvin, and D M Wilson, 3rd PMCID: PMC147600 Structural features of the minimal DNA binding domain (M98-F219) of human nucleotide excision repair protein XPA. G W Buchko, S Ni, B D Thrall, and M A Kennedy PMCID: PMC147584 Quantitative analysis of in vivo ribosomal events at UGA and UAG stop codons. S Mottagui-Tabar PMCID: PMC147583 The influence of fluorescent dye structure on the electrophoretic mobility of end-labeled DNA. O Tu, T Knott, M Marsh, K Bechtol, D Harris, D Barker, and J Bashkin PMCID: PMC147620 Characterization of the RNA binding proteins forming complexes with a novel putative regulatory region in the 3'-UTR of TNF-alpha mRNA. Z Hel, S Di Marco, and D Radzioch PMCID: PMC147622 Multiple domains for initiator binding proteins TFII-I and YY-1 are present in the initiator and upstream regions of the rat XDH/XO TATA-less promoter. M P Clark, C W Chow, J E Rinaldo, and R Chalkley PMCID: PMC147594 A high-throughput hybridization method for titer determination of viruses and gene therapy vectors. E M Atkinson, D J Debelak, L A Hart, and T C Reynolds PMCID: PMC147595 Octamer-primed cycle sequencing using dye-terminator chemistry. L B Jones and S H Hardin PMCID: PMC147608 MALDI-TOF mass spectrometric typing of single nucleotide polymorphisms with mass-tagged ddNTPs. Z Fei, T Ono, and L M Smith PMCID: PMC147612 An alternative PCR assay for quantifying mitochondrial DNA in crude preparations. T C Koekemoer, T G Downing, and W Oelofsen PMCID: PMC147619 |
