| | Research Articles GenBank. D A Benson, M S Boguski, D J Lipman, J Ostell, and B F Ouellette Nucleic Acids Res. 1998 January 1; 26(1): 1–7. PMCID: PMC147205 The EMBL nucleotide sequence database. G Stoesser, M A Moseley, J Sleep, M McGowran, M Garcia-Pastor, and P Sterk Nucleic Acids Res. 1998 January 1; 26(1): 8–15. PMCID: PMC147241 DNA Data Bank of Japan at work on genome sequence data. Y Tateno, K Fukami-Kobayashi, S Miyazaki, H Sugawara, and T Gojobori Nucleic Acids Res. 1998 January 1; 26(1): 16–20. PMCID: PMC147185 The Genome Sequence DataBase (GSDB): improving data quality and data access. C Harger, M Skupski, J Bingham, A Farmer, S Hoisie, P Hraber, D Kiphart, L Krakowski, M McLeod, J Schwertfeger, G Seluja, A Siepel, G Singh, D Stamper, P Steadman, N Thayer, R Thompson, P Wargo, M Waugh, J J Zhuang, and P A Schad Nucleic Acids Res. 1998 January 1; 26(1): 21–26. PMCID: PMC147232 The PIR-International Protein Sequence Database. W C Barker, J S Garavelli, D H Haft, L T Hunt, C R Marzec, B C Orcutt, G Y Srinivasarao, L S Yeh, R S Ledley, H W Mewes, F Pfeiffer, and A Tsugita Nucleic Acids Res. 1998 January 1; 26(1): 27–32. PMCID: PMC147240 MIPS: a database for protein sequences and complete genomes. H W Mewes, J Hani, F Pfeiffer, and D Frishman Nucleic Acids Res. 1998 January 1; 26(1): 33–37. PMCID: PMC147239 The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998. A Bairoch and R Apweiler Nucleic Acids Res. 1998 January 1; 26(1): 38–42. PMCID: PMC147215 MPW: the Metabolic Pathways Database. E Selkov, Jr, Y Grechkin, N Mikhailova, and E Selkov Nucleic Acids Res. 1998 January 1; 26(1): 43–45. PMCID: PMC147231 Compilation of DNA sequences of Escherichia coli K12: description of the interactive databases ECD and ECDC. M Kröger and R Wahl Nucleic Acids Res. 1998 January 1; 26(1): 46–49. PMCID: PMC147217 EcoCyc: Encyclopedia of Escherichia coli genes and metabolism. P D Karp, M Riley, S M Paley, A Pellegrini-Toole, and M Krummenacker Nucleic Acids Res. 1998 January 1; 26(1): 50–53. PMCID: PMC147256 Genes and proteins of Escherichia coli K-12. M Riley Nucleic Acids Res. 1998 January 1; 26(1): 54. PMCID: PMC147169 RegulonDB: a database on transcriptional regulation in Escherichia coli. A M Huerta, H Salgado, D Thieffry, and J Collado-Vides Nucleic Acids Res. 1998 January 1; 26(1): 55–59. PMCID: PMC147189 The non-redundant Bacillus subtilis (NRSub) database: update 1998. G Perrière, M Gouy, and T Gojobori Nucleic Acids Res. 1998 January 1; 26(1): 60–62. PMCID: PMC147236 CyanoBase, a www database containing the complete nucleotide sequence of the genome of Synechocystis sp. strain PCC6803. Y Nakamura, T Kaneko, M Hirosawa, N Miyajima, and S Tabata Nucleic Acids Res. 1998 January 1; 26(1): 63–67. PMCID: PMC147195 The Yeast Protein Database (YPD): a curated proteome database for Saccharomyces cerevisiae. P E Hodges, W E Payne, and J I Garrels Nucleic Acids Res. 1998 January 1; 26(1): 68–72. PMCID: PMC147175 SGD: Saccharomyces Genome Database. J M Cherry, C Adler, C Ball, S A Chervitz, S S Dwight, E T Hester, Y Jia, G Juvik, T Roe, M Schroeder, S Weng, and D Botstein Nucleic Acids Res. 1998 January 1; 26(1): 73–79. PMCID: PMC147204 AtDB, the Arabidopsis thaliana database, and graphical-web-display of progress by the Arabidopsis Genome Initiative. D J Flanders, S Weng, F X Petel, and J M Cherry Nucleic Acids Res. 1998 January 1; 26(1): 80–84. PMCID: PMC147237 FlyBase: a Drosophila database. Flybase Consortium. Nucleic Acids Res. 1998 January 1; 26(1): 85–88. PMCID: PMC147222 FlyNets and GIF-DB, two internet databases for molecular interactions in Drosophila melanogaster. E Mohr, F Horn, F Janody, C Sanchez, V Pillet, B Bellon, L Röder, and B Jacq Nucleic Acids Res. 1998 January 1; 26(1): 89–93. PMCID: PMC147170 GDB: the Human Genome Database. S I Letovsky, R W Cottingham, C J Porter, and P W Li Nucleic Acids Res. 1998 January 1; 26(1): 94–99. PMCID: PMC147203 Virgil: a database of rich links between GDB and GenBank. F Achard and E Barillot Nucleic Acids Res. 1998 January 1; 26(1): 100–101. PMCID: PMC147227 The Radiation Hybrid Database. P Lijnzaad, C Helgesen, and P Rodriguez-Tomé Nucleic Acids Res. 1998 January 1; 26(1): 102–105. PMCID: PMC147230 HuGeMap: a distributed and integrated Human Genome Map database. E Barillot, F Guyon, C Cussat-Blanc, E Viara, and G Vaysseix Nucleic Acids Res. 1998 January 1; 26(1): 106–107. PMCID: PMC147238 IXDB, an X chromosome integrated database. U Leser, R Wagner, A Grigoriev, H Lehrach, and H Roest Crollius Nucleic Acids Res. 1998 January 1; 26(1): 108–111. PMCID: PMC147242 MITOMAP: a human mitochondrial genome database--1998 update. A M Kogelnik, M T Lott, M D Brown, S B Navathe, and D C Wallace Nucleic Acids Res. 1998 January 1; 26(1): 112–115. PMCID: PMC147233 The mitBASE human dataset structure. M Attimonelli, D Caló, J M Cooper, A de Montalvo, F Licciulli, D Sasanelli, K Stevens, B S Malladi, C Saccone, and A H Shapira Nucleic Acids Res. 1998 January 1; 26(1): 116–119. PMCID: PMC147181 Update of MmtDB: a Metazoa mitochondrial DNA variants database. M Attimonelli, D Calò, A De Montalvo, C Lanave, D Sasanelli, M Tommaseo Ponzetta, and C Saccone Nucleic Acids Res. 1998 January 1; 26(1): 120–125. PMCID: PMC147228 Compilation of human mtDNA control region sequences. O Handt, S Meyer, and A von Haeseler Nucleic Acids Res. 1998 January 1; 26(1): 126–129. PMCID: PMC147248 The Mouse Genome Database (MGD): a community resource. Status and enhancements. The Mouse Genome Informatics Group. J A Blake, J T Eppig, J E Richardson, and M T Davisson Nucleic Acids Res. 1998 January 1; 26(1): 130–137. PMCID: PMC147182 The Organelle Genome Database Project (GOBASE). M Korab-Laskowska, P Rioux, N Brossard, T G Littlejohn, M W Gray, B F Lang, and G Burger Nucleic Acids Res. 1998 January 1; 26(1): 138–144. PMCID: PMC147200 Molecular Probe Data Base (MPDB). M G Campi, P Romano, L Milanesi, D Marra, M A Manniello, B Iannotta, G Rondanina, E Grasso, T Ruzzon, and L Santi Nucleic Acids Res. 1998 January 1; 26(1): 145–147. PMCID: PMC147247 Compilation of tRNA sequences and sequences of tRNA genes. M Sprinzl, C Horn, M Brown, A Ioudovitch, and S Steinberg Nucleic Acids Res. 1998 January 1; 26(1): 148–153. PMCID: PMC147216 A FastA based compilation of higher plant mitochondrial tRNA genes. A Sagliano, M Volpicella, R Gallerani, and L R Ceci Nucleic Acids Res. 1998 January 1; 26(1): 154–155. PMCID: PMC147198 5S rRNA Data Bank. M Szymanski, T Specht, M Z Barciszewska, J Barciszewski, and V A Erdmann Nucleic Acids Res. 1998 January 1; 26(1): 156–159. PMCID: PMC147219 Small RNA database. J Gu, Y Chen, and R Reddy Nucleic Acids Res. 1998 January 1; 26(1): 160–162. PMCID: PMC147212 The tmRNA Website. K P Williams and D P Bartel Nucleic Acids Res. 1998 January 1; 26(1): 163–165. PMCID: PMC147250 The tmRNA database (tmRDB). C Zwieb, N Larsen, and J Wower Nucleic Acids Res. 1998 January 1; 26(1): 166–167. PMCID: PMC147220 The guide RNA database. A E Souza and H U Göringer Nucleic Acids Res. 1998 January 1; 26(1): 168–169. PMCID: PMC147224 U-insertion/deletion Edited Sequence Database. L Simpson, S H Wang, O H Thiemann, J D Alfonzo, D A Maslov, and H A Avila Nucleic Acids Res. 1998 January 1; 26(1): 170–176. PMCID: PMC147258 The Signal Recognition Particle Database (SRPDB). N Larsen, T Samuelsson, and C Zwieb Nucleic Acids Res. 1998 January 1; 26(1): 177–178. PMCID: PMC147211 Database on the structure of small ribosomal subunit RNA. Y Van de Peer, A Caers, P De Rijk, and R De Wachter Nucleic Acids Res. 1998 January 1; 26(1): 179–182. PMCID: PMC147221 Database on the structure of large ribosomal subunit RNA. P De Rijk, A Caers, Y Van de Peer, and R De Wachter Nucleic Acids Res. 1998 January 1; 26(1): 183–186. PMCID: PMC147202 The Database of Ribosomal Cross links (DRC). P V Baranov, P V Sergiev, O A Dontsova, A A Bogdanov, and R Brimacombe Nucleic Acids Res. 1998 January 1; 26(1): 187–189. PMCID: PMC147229 The viroid and viroid-like RNA database. D A Lafontaine, S Mercure, V Poisson, and J P Perreault Nucleic Acids Res. 1998 January 1; 26(1): 190–191. PMCID: PMC147186 UTRdb: a specialized database of 5'- and 3'-untranslated regions of eukaryotic mRNAs. G Pesole, S Liuni, G Grillo, and C Saccone Nucleic Acids Res. 1998 January 1; 26(1): 192–195. PMCID: PMC147191 The RNA modification database--1998. J A McCloskey and P F Crain Nucleic Acids Res. 1998 January 1; 26(1): 196–197. PMCID: PMC147197 Databases and software for the analysis of mutations in the human p53 gene, human hprt gene and both the lacI and lacZ gene in transgenic rodents. N F Cariello, G R Douglas, N J Gorelick, D W Hart, J D Wilson, and T Soussi Nucleic Acids Res. 1998 January 1; 26(1): 198–199. PMCID: PMC147201 p53 gene mutation: software and database. C Béroud and T Soussi Nucleic Acids Res. 1998 January 1; 26(1): 200–204. PMCID: PMC147206 IARC Database of p53 gene mutations in human tumors and cell lines: updated compilation, revised formats and new visualisation tools. P Hainaut, T Hernandez, A Robinson, P Rodriguez-Tome, T Flores, M Hollstein, C C Harris, and R Montesano Nucleic Acids Res. 1998 January 1; 26(1): 205–213. PMCID: PMC147235 A database of germline p53 mutations in cancer-prone families. Z Sedlacek, R Kodet, A Poustka, and P Goetz Nucleic Acids Res. 1998 January 1; 26(1): 214–215. PMCID: PMC147257 The factor VIII Structure and Mutation Resource Site: HAMSTeRS version 4. G Kemball-Cook, E G Tuddenham, and A I Wacey Nucleic Acids Res. 1998 January 1; 26(1): 216–219. PMCID: PMC147260 PAH Mutation Analysis Consortium Database: 1997. Prototype for relational locus-specific mutation databases. P M Nowacki, S Byck, L Prevost, and C R Scriver Nucleic Acids Res. 1998 January 1; 26(1): 220–225. PMCID: PMC147234 aCHEdb: the database system for ESTHER, the alpha/beta fold family of proteins and the Cholinesterase gene server. X Cousin, T Hotelier, K Giles, J P Toutant, and A Chatonnet Nucleic Acids Res. 1998 January 1; 26(1): 226–228. PMCID: PMC147245 Marfan Database (third edition): new mutations and new routines for the software. G Collod-Béroud, C Béroud, L Ades, C Black, M Boxer, D J Brock, K J Holman, A de Paepe, U Francke, U Grau, C Hayward, H G Klein, W Liu, L Nuytinck, L Peltonen, A B Alvarez Perez, T Rantamäki, C Junien, and C Boileau Nucleic Acids Res. 1998 January 1; 26(1): 229–233. PMCID: PMC147226 The Androgen Receptor Gene Mutations Database. B Gottlieb, H Lehvaslaiho, L K Beitel, R Lumbroso, L Pinsky, and M Trifiro Nucleic Acids Res. 1998 January 1; 26(1): 234–238. PMCID: PMC147184 The Nuclear Receptor Resource: a growing family. E Martinez, D D Moore, E Keller, D Pearce, J P Vanden Heuvel, V Robinson, B Gottlieb, P MacDonald, S Simons, Jr, E Sanchez, and M Danielsen Nucleic Acids Res. 1998 January 1; 26(1): 239–241. PMCID: PMC147223 BTKbase, mutation database for X-linked agammaglobulinemia (XLA). M Vihinen, O Brandau, L J Brandén, S P Kwan, I Lappalainen, T Lester, J G Noordzij, H D Ochs, J Ollila, S M Pienaar, P Riikonen, B K Saha, and C I Smith Nucleic Acids Res. 1998 January 1; 26(1): 242–247. PMCID: PMC147244 LDLR Database (second edition): new additions to the database and the software, and results of the first molecular analysis. M Varret, J P Rabés, R Thiart, M J Kotze, H Baron, A Cenarro, O Descamps, M Ebhardt, J C Hondelijn, G M Kostner, Y Miyake, M Pocovi, H Schmidt, H Schuster, M Stuhrmann, T Yamamura, C Junien, C Béroud, and C Boileau Nucleic Acids Res. 1998 January 1; 26(1): 248–252. PMCID: PMC147253 The Human Collagen Mutation Database 1998. R Dalgleish Nucleic Acids Res. 1998 January 1; 26(1): 253–255. PMCID: PMC147171 Software and database for the analysis of mutations in the VHL gene. C Béroud, D Joly, C Gallou, F Staroz, M T Orfanelli, and C Junien Nucleic Acids Res. 1998 January 1; 26(1): 256–258. PMCID: PMC147207 The Human PAX6 Mutation Database. A Brown, M McKie, V van Heyningen, and J Prosser Nucleic Acids Res. 1998 January 1; 26(1): 259–264. PMCID: PMC147180 Haemophilia B: database of point mutations and short additions and deletions--eighth edition. F Giannelli, P M Green, S S Sommer, M Poon, M Ludwig, R Schwaab, P H Reitsma, M Goossens, A Yoshioka, M S Figueiredo, and G G Brownlee Nucleic Acids Res. 1998 January 1; 26(1): 265–268. PMCID: PMC147172 APC gene: database of germline and somatic mutations in human tumors and cell lines. P Laurent-Puig, C Béroud, and T Soussi Nucleic Acids Res. 1998 January 1; 26(1): 269–270. PMCID: PMC147178 Software and database for the analysis of mutations in the human WT1 gene. C Jeanpierre, C Béroud, P Niaudet, and C Junien Nucleic Acids Res. 1998 January 1; 26(1): 271–274. PMCID: PMC147190 GPCRDB: an information system for G protein-coupled receptors. F Horn, J Weare, M W Beukers, S Hörsch, A Bairoch, W Chen, O Edvardsen, F Campagne, and G Vriend Nucleic Acids Res. 1998 January 1; 26(1): 275–279. PMCID: PMC147194 Expanded versions of the 16S and 23S ribosomal RNA mutation databases (16SMDBexp and 23SMDBexp) K L Triman, A Peister, and R A Goel Nucleic Acids Res. 1998 January 1; 26(1): 280–284. PMCID: PMC147214 The human gene mutation database. D N Cooper, E V Ball, and M Krawczak Nucleic Acids Res. 1998 January 1; 26(1): 285–287. PMCID: PMC147254 EpoDB: a database of genes expressed during vertebrate erythropoiesis. F Salas, J Haas, B Brunk, C J Stoeckert, Jr, and G C Overton Nucleic Acids Res. 1998 January 1; 26(1): 288–289. PMCID: PMC147174 A mutation spectra database for bacterial and mammalian genes: 1998. F Hutchinson and J E Donnellan, Jr Nucleic Acids Res. 1998 January 1; 26(1): 290–291. PMCID: PMC147176 Database of mutations within the adenovirus 5 E1A oncogene. J S Mymryk Nucleic Acids Res. 1998 January 1; 26(1): 292–294. PMCID: PMC147177 SV40 large tumor antigen (T antigen): database of mutants. C G Robinson and J M Pipas Nucleic Acids Res. 1998 January 1; 26(1): 295–296. PMCID: PMC147218 IMGT, the International ImMunoGeneTics database. M P Lefranc, V Giudicelli, C Busin, J Bodmer, W Müller, R Bontrop, M Lemaitre, A Malik, and D Chaume Nucleic Acids Res. 1998 January 1; 26(1): 297–303. PMCID: PMC147225 The PRINTS protein fingerprint database in its fifth year. T K Attwood, M E Beck, D R Flower, P Scordis, and J N Selley Nucleic Acids Res. 1998 January 1; 26(1): 304–308. PMCID: PMC147187 Superior performance in protein homology detection with the Blocks Database servers. S Henikoff, S Pietrokovski, and J G Henikoff Nucleic Acids Res. 1998 January 1; 26(1): 309–312. PMCID: PMC147168 The HSSP database of protein structure-sequence alignments and family profiles. C Dodge, R Schneider, and C Sander Nucleic Acids Res. 1998 January 1; 26(1): 313–315. PMCID: PMC147243 Touring protein fold space with Dali/FSSP. L Holm and C Sander Nucleic Acids Res. 1998 January 1; 26(1): 316–319. PMCID: PMC147193 Pfam: multiple sequence alignments and HMM-profiles of protein domains. E L Sonnhammer, S R Eddy, E Birney, A Bateman, and R Durbin Nucleic Acids Res. 1998 January 1; 26(1): 320–322. PMCID: PMC147209 The ProDom database of protein domain families. F Corpet, J Gouzy, and D Kahn Nucleic Acids Res. 1998 January 1; 26(1): 323–326. PMCID: PMC147246 An Integrated Sequence-Structure Database incorporating matching mRNA sequence, amino acid sequence and protein three-dimensional structure data. I A Adzhubei, A A Adzhubei, and S Neidle Nucleic Acids Res. 1998 January 1; 26(1): 327–331. PMCID: PMC147252 Current status of the SWISS-2DPAGE database. C Hoogland, J C Sanchez, L Tonella, A Bairoch, D F Hochstrasser, and R D Appel Nucleic Acids Res. 1998 January 1; 26(1): 332–333. PMCID: PMC147259 Codon usage tabulated from the international DNA sequence databases. Y Nakamura, T Gojobori, and T Ikemura Nucleic Acids Res. 1998 January 1; 26(1): 334. PMCID: PMC147173 The translational signal database, TransTerm, is now a relational database. M E Dalphin, C M Brown, P A Stockwell, and W P Tate Nucleic Acids Res. 1998 January 1; 26(1): 335–337. PMCID: PMC147192 REBASE - restriction enzymes and methylases. R J Roberts and D Macelis Nucleic Acids Res. 1998 January 1; 26(1): 338–350. PMCID: PMC147179 The ribonuclease P database. J W Brown Nucleic Acids Res. 1998 January 1; 26(1): 351–352. PMCID: PMC147188 The Eukaryotic Promoter Database EPD. R Cavin Périer, T Junier, and P Bucher Nucleic Acids Res. 1998 January 1; 26(1): 353–357. PMCID: PMC147208 PLACE: a database of plant cis-acting regulatory DNA elements. K Higo, Y Ugawa, M Iwamoto, and H Higo Nucleic Acids Res. 1998 January 1; 26(1): 358–359. PMCID: PMC147199 OOTFD (Object-Oriented Transcription Factors Database): an object-oriented successor to TFD. D Ghosh Nucleic Acids Res. 1998 January 1; 26(1): 360–362. PMCID: PMC147249 Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL. T Heinemeyer, E Wingender, I Reuter, H Hermjakob, A E Kel, O V Kel, E V Ignatieva, E A Ananko, O A Podkolodnaya, F A Kolpakov, N L Podkolodny, and N A Kolchanov Nucleic Acids Res. 1998 January 1; 26(1): 362–367. PMCID: PMC147251 MHCPEP, a database of MHC-binding peptides: update 1997. V Brusic, G Rudy, and L C Harrison Nucleic Acids Res. 1998 January 1; 26(1): 368–371. PMCID: PMC147255 Histone Sequence Database: new histone fold family members. A D Baxevanis and D Landsman Nucleic Acids Res. 1998 January 1; 26(1): 372–375. PMCID: PMC147196 PROMISE: a database of information on prosthetic centres and metal ions in protein active sites. K N Degtyarenko, A C North, D N Perkins, and J B Findlay Nucleic Acids Res. 1998 January 1; 26(1): 376–381. PMCID: PMC147213 PhosphoBase: a database of phosphorylation sites. N Blom, A Kreegipuu, and S Brunak Nucleic Acids Res. 1998 January 1; 26(1): 382–386. PMCID: PMC147210 O-GLYCBASE Version 3.0: a revised database of O-glycosylated proteins. J E Hansen, O Lund, J Nilsson, K Rapacki, and S Brunak Nucleic Acids Res. 1998 January 1; 26(1): 387–389. PMCID: PMC147183 |