| | Research Articles Cysteine-to-alanine replacements in the Escherichia coli SoxR protein and the role of the [2Fe-2S] centers in transcriptional activation. T M Bradley, E Hidalgo, V Leautaud, H Ding, and B Demple PMCID: PMC146616 The bifunctional DCOH protein binds to HNF1 independently of its 4-alpha-carbinolamine dehydratase activity. D J Sourdive, C Transy, S Garbay, and M Yaniv PMCID: PMC146627 Two distinct DNA ligase activities in mitotic extracts of the yeast Saccharomyces cerevisiae. W Ramos, N Tappe, J Talamantez, E C Friedberg, and A E Tomkinson PMCID: PMC146610 c-Myc/Max heterodimers bind cooperatively to the E-box sequences located in the first intron of the rat ornithine decarboxylase (ODC) gene. A J Walhout, J M Gubbels, R Bernards, P C van der Vliet, and H T Timmers PMCID: PMC146624 Structure of a bis-amidinium derivative of Hoechst 33258 complexed to dodecanucleotide d(CGCGAATTCGCG) 2 : the role of hydrogen bonding in minor groove drug-DNA recognition GR Clark, DW Boykin, A Czarny, and S Neidle PMCID: PMC146637 Footprinting of echinomycin and actinomycin D on DNA molecules asymmetrically substituted with inosine and/or 2,6-diaminopurine. S Jennewein and M J Waring PMCID: PMC146638 Structure of a bis-amidinium derivative of hoechst 33258 complexed to dodecanucleotide d(CGCGAATTCGCG)2: the role of hydrogen bonding in minor groove drug-DNA recognition. G R Clark, D W Boykin, A Czarny, and S Neidle PMCID: PMC146622 c-Myc/Max heterodimers bind cooperatively to the E-box sequences located in the first intron of the rat ornithine decarboxylase (ODC) gene AJM Walhout, JM Gubbels, R Bernards, van der Vliet PC, and HTM Timmers PMCID: PMC146634 Profile of the DNA recognition site of the archaeal homing endonuclease I-DmoI. C Aagaard, M J Awayez, and R A Garrett PMCID: PMC146612 Evidence for the stochastic integration of gene trap vectors into the mouse germline. K Chowdhury, P Bonaldo, M Torres, A Stoykova, and P Gruss PMCID: PMC146629 Structural features of the DNA hairpin d(ATCCTA-GTTA-TAGGAT): formation of a G-A base pair in the loop. M J van Dongen, M M Mooren, E F Willems, G A van der Marel, J H van Boom, S S Wijmenga, and C W Hilbers PMCID: PMC146618 The mechanism of mutation induction by a hydrogen bond ambivalent, bicyclic N4-oxy-2'-deoxycytidine in Escherichia coli. K Negishi, D M Williams, Y Inoue, K Moriyama, D M Brown, and H Hayatsu PMCID: PMC146628 Characterization of the alternative excision repair pathway of UV-damaged DNA in Schizosaccharomyces pombe. R Yonemasu, S J McCready, J M Murray, F Osman, M Takao, K Yamamoto, A R Lehmann, and A Yasui PMCID: PMC146609 Inferring the conformation of RNA base pairs and triples from patterns of sequence variation. D Gautheret and R R Gutell PMCID: PMC146633 NMR analysis of the hydrogen bonding interactions of the RNA-binding domains of the Drosophila sex-lethal protein with target RNA fragments with site-specific [3-15N]uridine substitutions. I Kim, Y Muto, M Inoue, S Watanabe, A Kitamura, S Yokoyama, K Hosono, H Takaku, A Ono, M Kainosho, H Sakamoto, and Y Shimura PMCID: PMC146625 Substrate and mispairing properties of 5-formyl-2'-deoxyuridine 5'-triphosphate assessed by in vitro DNA polymerase reactions. M Yoshida, K Makino, H Morita, H Terato, Y Ohyama, and H Ide PMCID: PMC146632 A new family of site-specific retrotransposons, SART1, is inserted into telomeric repeats of the silkworm, Bombyx mori. H Takahashi, S Okazaki, and H Fujiwara PMCID: PMC146635 A simple luciferase assay for signal transduction activity detection of epidermal growth factor displayed on phage. C Souriau, P Fort, P Roux, O Hartley, M P Lefranc, and M Weill PMCID: PMC146613 Intracellular localization and unique conserved sequences of three small nucleolar RNAs. N Selvamurugan, O H Joost, E S Haas, J W Brown, N J Galvin, and G L Eliceiri PMCID: PMC146614 The Cbp2 protein stimulates the splicing of the omega intron of yeast mitochondria. L C Shaw and A S Lewin PMCID: PMC146636 Detailed analysis of base preferences at the cleavage site of a trans-acting HDV ribozyme: a mutation that changes cleavage site specificity. F Nishikawa, H Fauzi, and S Nishikawa PMCID: PMC146615 Direct PCR sequencing with boronated nucleotides. K W Porter, J D Briley, and B R Shaw PMCID: PMC146626 A muscle-specific enhancer within intron 1 of the human dystrophin gene is functionally dependent on single MEF-1/E box and MEF-2/AT-rich sequence motifs. H J Klamut, L O Bosnoyan-Collins, R G Worton, and P N Ray PMCID: PMC146611 A comparison of expressed sequence tags (ESTs) to human genomic sequences. T G Wolfsberg and D Landsman PMCID: PMC146621 An immunoaffinity purified Schizosaccharomyces pombe TBP-containing complex directs correct initiation of the S.pombe rRNA gene promoter. L Chen, A Guo, and L Pape PMCID: PMC146630 BC1 RNA, the transcript from a master gene for ID element amplification, is able to prime its own reverse transcription. M R Shen, J Brosius, and P L Deininger PMCID: PMC146617 Direct genetic selection of two classes of R17/MS2 coat proteins with altered capsid assembly properties and expanded RNA-binding activities. S Wang, H L True, E M Seitz, K A Bennett, D E Fouts, J F Gardner, and D W Celander PMCID: PMC146620 Improved efficiency for primer extension by using a long, highly-labeled primer generated from immobilized single-stranded DNA templates. G Flouriot, C Pope, M R Kenealy, and F Gannon PMCID: PMC146631 Large scale preparation of positively supercoiled DNA using the archaeal histone HMf. W A LaMarr, K M Sandman, J N Reeve, and P C Dedon PMCID: PMC146619 Simultaneous detection of near-field topographic and fluorescence images of human chromosomes via scanning near-field optical/atomic-force microscopy (SNOAM). S Iwabuchi, H Muramatsu, N Chiba, Y Kinjo, Y Murakami, T Sakaguchi, K Yokoyama, and E Tamiya PMCID: PMC146623 |
