CEBS version 2 integrates study design, assay data and microarray data. This makes it possible to use data derived from subjects, such as the response to treatment or the treatment itself, to filter microarray data (See [
Example 1. Identify putative gene signatures distinguishing mice exhibiting two different pathology results (http://www.niehs.nih.gov/research/resources/databases/cebs/forum/docs/cebs-ex1.pdf) (398KB) |
demo (http://www.niehs.nih.gov/research/resources/databases/cebs/forum/docs/example1.zip) (1,996KB) ] and [
Example 2. Compare gene signatures in common with treatments of different chemical stressors impinging on common biological processes (http://www.niehs.nih.gov/research/resources/databases/cebs/forum/docs/cebs-ex2.pdf) (50KB) |
demo (http://www.niehs.nih.gov/research/resources/databases/cebs/forum/docs/example2.zip) (2,089KB) ]). In addition to microarray data, CEBS holds proteomics data and supports the capability to download gel images, spectra and spot lists (See [
Example 3. Use CEBS to explore proteomics data (http://www.niehs.nih.gov/research/resources/databases/cebs/forum/docs/cebs-ex3.pdf) (84KB) |
demo (http://www.niehs.nih.gov/research/resources/databases/cebs/forum/docs/example3.zip) (1,888KB) ]). Because CEBS permits the user to analyze microarray data, the CEBS user is not limited to the analysis path taken by the original depositor (See [
Example 4. Identify putative gene signatures distinguishing wild type and susceptible mice exposed to an environmental stressor (http://www.niehs.nih.gov/research/resources/databases/cebs/forum/docs/cebs-ex4.pdf) (239KB) |
demo (http://www.niehs.nih.gov/research/resources/databases/cebs/forum/docs/example4.zip) (1,870KB) ]).
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