Skip Navigation
Lister Hill Center Logo  

Search Tips
Contact Us | Site Map | FAQs
About the Lister Hill Center
Home
Welcome
Organization
Visitor Information
Staff Directory
Innovative Research
Medical Informatics
Language & Knowledge Processing
Image Processing
Information Systems
Infrastructure Research
Multimedia Visualization
Publications and Lectures
Published Articles
Technical Reports
Lectures
Training and Employment
Training Opportunities
Employment Opportunities
LHNCBC: Browse Published Articles
Published ArticlesAdobe Acrobat Reader
Download Free Adobe Acrobat Reader
Communications Engineering Branch
Years:  2008  2007  2006  2005  2004  2003  2002  2001  2000
Year 2008Back to top
A Spine X-Ray Image Retrieval System Using Partial Shape Matching
Xu X, Lee DJ, Antani S, Long LR
IEEE Transactions on Information Technology in Biomedicine. January 2008;12(1):100-8
(Abstract) (PMID: 18270042 )
A Web-accessible Content-based Cervicographic Image Retrieval System
Xue Z, Long R, Antani SK, Thoma GR
Proc. SPIE Medical Imaging 2008. April 2008;6919:691907-1-9
(Abstract)
Balancing the Role of Priors in Multi-Observer Segmentation Evaluation
Zhu Y, Huang X, Wang W, et al
J Sign Process Syst. New York, NY. May 2008
(Abstract)
Bridging the Gap: Enabling CBIR in Medical Applications
Antani S, Long LR, Thoma GR
Proc. 21st IEEE International Symposium on Computer-Based Medical Systems (CBMS). Jyvaskyla, Finland. June 2008:4-6
(Abstract) (PDF)
CBIR of Spine X-ray Images on Inter-vertebral Disc Space and Shape Profiles
Chang Y, Antani S, Lee DJ, et al
Proc. 21st IEEE International Symposium on Computer-Based Medical Systems (CBMS). Jyvaskyla, Finland. June 2008:224-9.
(Abstract) (PDF)
Combining Medical Domain Ontological Knowledge and Low-level Image Features for Multimedia Indexing
Demner-Fushman D, Antani SK, Simpson M, Thoma GR
Proceedings of 2nd International Language Resources for Content-Based Image Retrieval Workshop (OntoImage 2008), part of 6th Language Resources and Evaluation Conference (LREC 2008). Marrakech, Morrocco. May 2008:CDROM Proceedings
(Abstract) (PDF)
Combining Medical Domain Ontological Knowledge and Low-level Image Features for Multimedia Indexing
Demner-Fushman D, Antani SK, Simpson M, Thoma GR
Proc. 2nd Int'l Language Resources for Content-Based Image Retrieval Workshop (OntoImage 2008), part of 6th Language Resources and Evaluation Conference (LREC 2008). Marrakech, Morrocco. May 2008:CDROM Proceedings
(Abstract)
Essie: a concept-based search engine for structured biomedical text
Ide NC, Loane RF, Demner-Fushman D
J Am Med Inform Assoc. 2007 May-Jun;14(3):253-63. Epub 2007 Feb 28
(Abstract) (PMID: 17329729 )
Evaluation of Linear Array Human Papillomavirus Genotyping Using Automatic Optical Imaging Software
Jeronimo J, Wentzensen N, Long R, et al
Journal of Clinical Microbiology. August 2008;46(8):2759-65
(Abstract) (PMID: 18550741 )
Exploring use of Images in Clinical Articles for Decision Support in Evidence-Based Medicine
Antani SK, Demner-Fushman D, Li J, Srinivasan BV, Thoma GR
Proc. SPIE-IS/T Electronic Imaging. San Jose, CA. January 2008;6815:68150Q(1-10)
(Abstract) (PDF)
Extracting a Sparsely-Located Named Entity from Online HTML Medical Articles Using Support Vector Machine
Zou J, Le DX, Thoma GR
Proc. SPIE-IS/T Electronic Imaging. San Jose, CA. January 2008;6815:6815OP(1-10)
(Abstract)
Hybrid Approach Combining Contextual and Statistical Information for Identifying MEDLINE Citation Terms
Kim IC, Le DX, Thoma GR
Proc. SPIE-IS/T Electronic Imaging. San Jose, CA. January 2008;6815:68150P(1-9)
(Abstract) (PDF)
Live Wire Segmentation Tool for Osteophyte Detection in Lumbar Spine X-Ray Images
Seetharaman S, Stanley RJ, De S, et al
Proc of 1st IEEE International Conference on Emerging Trends in Engineering and Technology (ICETET 2008). Nagpur, India. July 2008:715-20
(Abstract)
Methodology for Creating UMLS Content Views Appropriate for Biomedical Natural Language Processing
Aronson AR, Mork JG, Shooshan SE, Demner-Fushman D
AMIA Annu Symp Proc. 2008 Nov 6:21-5
(Abstract) (PMID: 18998883 )
Naive Bayes Classifier for Extracting Bibliographic Information From Biomedical Online Articles
Kim J, Le DX, Thoma GR
Proc. of the 2008 International Conference on Data Mining. Las Vegas, Nevada, USA. July 2008;II:373-8
(Abstract)
Ontology of Gaps in Content-Based Image Retrieval
Deserno TM, Antani SK, Long LR
Journal of Digital Imaging. February 2008
(Abstract) (PMID: 18239964 )
Size-invariant Descriptors for Detecting Regions of Abnormal Growth in Cervical Vertebrae
Stanley RJ, Antani S, Long LR, Thoma GR, Gupta K, Das M
Computerized Medical Imaging and Graphics 32 (2008) 44-52
(Abstract) (PMID: 17949946 )
Testing the Scalability of a DSpace-based Archive
Misra D, Seamans J, Thoma GR
Proc. IS&T Archiving 2008. Bern, Switzerland. June 2008:36-40
(Abstract) (PDF)
Tissue Classification using Cluster Features for Lesion Detection in Digital Cervigrams
Huang X, Wang W, Xue Z, Antani SK, et al
Proc. SPIE Medical Imaging 2008. April 2008;6914:69141Z-1-8
(Abstract) (PDF)
Toward Automatic Recognition of High Quality Clinical Evidence.
Kilicoglu H, Demner-Fushman D, Rindflesch TC, Wilczynski NL, Haynes RB
AMIA Annu Symp Proc. 2008 Nov 6:368
(Abstract) (PMID: 18998881 )
Towards Automatic Recognition of Scientifically Rigorous Clinical Research Evidence
Kilicoglu H, Demner-Fushman D, Rindflesch TC, Wilczynski NL, Haynes RB
J Am Med Inform Assoc. 2009 Jan-Feb;16(1):25-31. Epub 2008 Oct 24
(Abstract) (PMID: 18952929 )
Web-based Multi-observer Segmentation Evaluation Tool
Zhu Y, Huang X, Lopresti D, Long R, et al
Proc. 21st IEEE International Symposium on Computer-Based Medical Systems (CBMS). Jyvaskyla, Finland. June 2008:167-9
(Abstract)
 
Year 2007Back to top
A Lightweight Statistics Package for Interactive Publications
Simpson M, Ford G, Antani S, Demner-Fushman D, Thoma GR
Poster at 20th NIH Research Festival (TECH-15), September 2007, National Institutes of Health
(Abstract) (PDF)
Answering Clinical Questions with Knowledge-based and Statistical Techniques
Demner-Fushman D, Lin J
Computational Linguistics. 2007 Jan;33(1):63-103
(Abstract) (PDF)
Archiving a Historic Medico-legal Collection: Automation and Workflow Customization
Misra D, Mao S, Rees J, Thoma GR
Proc. IS&T Archiving 2007. Arlington, Virginia, May 2007; 157-61.
(Abstract) (PDF)
A Spine X-ray Image Retrieval System using Partial Shape Matching
Xu X, Lee DJ, Antani S, Long LR
To appear in IEEE Transactions on Information Technology in Biomedicine. 2007
(Abstract) (PDF)
Automatically Finding Images for Clinical Decision Support
Demner-Fushman D, Antani S, Thoma GR
To appear in Proceedings of IEEE International Workshop on Data Mining in Medicine (DM-Med 2007). Omaha, NE, October 2007, pp. 139-144.
(Abstract) (PDF)
Automatic Evaluation of Uterine Cervix Segmentations
Lotenberg S, Gordon S, Long LR, Antani SK, Jeronimo J, Greenspan H
Proc. SPIE Medical Imaging 2007. Vol. 6515: 65151J-1-12.
(Abstract) (PDF)
Challenges in Automated Detection of Cervical Intraepithelial Neoplasia
Srinivasan Y, Nutter BS, Mitra SD, Yang S, Phillips B, Long LR
Proc. SPIE Medical Imaging 2007. Vol. 6514: 65140F-1-11.
(Abstract) (PDF)
Combining Resources to Find Answers to Biomedical Questions
Demner-Fushman D, Humphrey SM, Ide NC, Loane RF, et al
Proc TREC 2007, 205-14
(Abstract) (PDF)
Combining Static Classifiers and Class Syntax Models for Logical Entity Recognition in Scanned Historical Documents
Mao S, Mansukhani P, Thoma GR
Proc. IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Minneapolis, Minnesota, June 2007, pp. 1-8.
(Abstract) (PDF)
Comparative Performance Analysis of Cervix ROI Extraction and Specular Reflection Removal Algorithms for Uterine Cervix Image Analysis
Xue Z, Antani SK, Long LR, Thoma GR
Proc. SPIE Medical Imaging 2007. Vol. 6512: 65124I-1-9.
(Abstract) (PDF)
Essie: A Concept-based Search Engine for Structured BiomedicalText
Ide NC, Loane RF, Demner-Fushman D
J Am Med Inform Assoc 2007;14(3):253-263.
(Abstract) (PDF)
Exploring Access to Scientific Literature Using Content-Based Image Retrieval
Deserno TM, Antani SK, Long LR
Proc. SPIE Medical Imaging 2007. Vol. 6516: 65160L-1-8.
(Abstract) (PDF)
Extracting Semantic Predications from MEDLINE Citations for Pharmacogenomics
Ahlers C, Fiszman M, Demner-Fushman D, Lang F, Rindflesch TC
Pacific Symposium on Biocomputing 2007 12:209-220
(Abstract) (PDF)
From Indexing the Biomedical Literature to Coding Clinical Text: Experience with MTI and Machine Learning Approaches
Aronson AR, Bodenreider O, Demner-Fushman D, Fung KW, Lee VK, Mork JG, Neveol A, Peters L, Rogers WJ
Proc. 2007 Workshop on Biomedical Natural Language Processing (BioNL'07), June 2007, pp. 105-112, Prague, Czech Republic.
(Abstract) (PDF)
Gaps in Content-Based Image Retrieval
Deserno TM, Antani SK, Long LR
Proc. SPIE Medical Imaging 2007. Vol. 6516: 65160J-1-11.
(Abstract) (PDF)
Geographically Distributed Complementary Content-Based Image Retrieval Systems for Biomedical Image Informatics
Antani SK, Deserno TM, Leon S, Long LR, Thoma GR
MEDINFO August 2007, pp. 493:7
(Abstract) (PDF)
Identification and Segmentation of Multi-Panel Images in Biomedical Journal Articles
Srinivasan B, Antani S, Demner-Fushman D, Thoma GR
Poster at 20th NIH Research Festival (BIOINFO-1), September 2007, National Institutes of Health
(Abstract) (PDF)
Identification of 'comment-on sentences' in Online Biomedical Documents Using Support Vector Machines
Kim IC, Le DX, Thoma GR
Proc. SPIE conference on Document Recognition and Retrieval, vol. 6500, pp.65000O-1-65000O-8, San Jose, CA, January 2007
(Abstract) (PDF)
Interfacing Global and Local CBIR Systems for Medical Image Retrieval
Antani SK, Deserno TM, Long LR, Guld MO, Neve L, Thoma GR
Proc. Workshop on Medical Imaging Research (Bildverarbeitung fur die Medizin). March 2007; 166-71.
(Abstract) (PDF)
Inter-observer Agreement in the Evaluation of Digitized Cervical Images
Jeronimo J, Massad S, Castle PE, Schiffman M, NIH/ASCCP Research Group
American Journal of Obstetrics and Gynecology. Vol. 197, Issue 1, July 2007
(Abstract)
Interpreting Comparative Constructons in Biomedical Text
Fiszman M, Demner-Fushman D, Lang FM, Goetz P, Rindflesch TC
Proc. 2007 Workshop on Biomedical Natural Language Processing (BioNL'07), June 2007, pp. 137-144, Prague, Czech Republic.
(Abstract) (PDF)
Investigating CBIR Techniques for Cervicographic Images
Xue Z, Antani S, Long LR, Jeronimo J, Thoma GR
To appear in Proceedings of the 2007 Annual Symposium of the American Medical Information Association (AMIA 2007), Chicago, November 2007, pp. 826-830
(Abstract) (PDF)
Issues in the Registration of Clinical Trials
Zarin DA, Ide NC, Tse T, Harlan WR, West JC, Lindberg DAB
JAMA 2007:297(19):2112-2120.
(Abstract) (PDF)
Knowledge-Based Methods to Help Clinicians Find Answers in MEDLINE
Sneiderman CA, Demner-Fushman D, Fiszman M, Ide NC, Rindflesch TC
2007 Nov-Dec;14(6):772-80. Epub 2007 Aug 21
(Abstract) (PDF)
Localizing Text and Symbols in Images from Biomedical Journal Articles
Li J, Demner-Fushman D, Thoma GR
Poster at 20th NIH Research Festival (BIOINFO-6), September 2007, National Institutes of Health
(Abstract) (PDF)
New Frontiers in Biomedical Text Mining
Zweigenbaum P, Demner-Fushman D, Yu H, Cohen KB
Pacific Symposium on Biocomputing 12:205-208(2007)
(Abstract) (PDF)
Online Medical Journal Article Layout Analysis
Zou J, Le DX, Thoma GR
Proc. SPIE-IS&T Electronic Imaging 2007, SPIE Vol. 6500: 65000V (1-12).
(Abstract) (PDF)
PDF File Migration to PDF/A: Technical Considerations
Walker FL, Gallagher ME, Thoma GR
Proc. IS&T Archiving 2007. Arlington, Virginia, May 2007; 6-11.
(Abstract) (PDF)
Semantic Clustering of Answers to Clinical Questions
Lin J, Demner-Fushman D
To appear in Proceedings of the 2007 Annual Symposium of the American Medical Information Association (AMIA 2007), Chicago, November 2007, pp. 458-462
(Abstract) (PDF)
Simultaneous Layout Style and Logical Entity Recognition in a Heterogeneous Collection of Documents
Chen S, Mao S, Thoma GR
Proceedings of 9th Int. Conf. on Document Analysis and Recognition (ICDAR2007). Curitiba, Brazil; September 2007, pp. 118-22
(Abstract) (PDF)
SPIRS: A Framework for Content-based Image Retrieval from Large Biomedical Databases
Hsu W, Long LR, Antani SK
Proc. of MEDINFO August 2007. K. Kuhn etal. (Eds.). 188:92(2007)
(Abstract) (PDF)
Structure and Content Analysis for HTML Medical Articles: A Hidden Markov Model Approach
Zou J, Le DX, Thoma GR
Proc August 2007 ACM Symposium on Document Engineering. pp. 199-201.
(Abstract) (PDF)
Using Wireless Handheld Computers to Seek Information at the Point of Care: An Evaluation by Clinicians
Hauser SE, Demner-Fushman D, Jacobs JL, Humphrey SM, Ford G, Thoma GR
J Am Med Inform Assoc 2007;14:807-814. DOI 10.1197/jamia.M2424.
(Abstract) (PDF)
Visual Appearance of the Uterine Cervix: Correlation with Human Papillomavirus Detection and Type
Jeronimo J, Massad LS, Schiffman M for the NIH-ASCCP Research Group
Am J Obstet Gynecol 2007; 197:47.e1-47.e8.
(Abstract) (PDF)
Web-based STAPLE for Quality Estimation of Multiple image Segmentations
Zhu Y, Long LR, Antani S, Xue Z, Thoma GR
Poster at 20th NIH Research Festival (IMAG-12), September 2007, National Institutes of Health
(Abstract) (PDF)
 
Year 2006Back to top
A Blended Training Approach Using Videoconferencing for Distance Education
Locatis C, Gaines C, Liu W, Gill MJ, Carney J, Foster J, McCall V, Woods M
Journal of the Medical Library Association, October 2006, 94(4):464-8
(Abstract) (PDF)
Answer Extraction, Semantic Clustering, and Extractive Summarization for Clinical Question Answering
Demner-Fushman D, Lin J
Proceedings of the 21th International Conference on Computational Linguistics and 44th Annual Meeting of the Association for Computational Linguistics (COLING/ACL 2006), July 2006, Sydney, Australia
(Abstract) (PDF)
Automatically Identifying Health Outcome Information in MEDLINE Records
Demner-Fushman D, Few B, Hauser SE, Thoma GR
J Am Med Inform Assoc. 2006 Jan-Feb;13(1):52-60
(Abstract) (PDF)
Automatic Extraction of Bibliographic Information from Biomedical Online Journal Articles Using a String Matching Algorithm
Kim J, Le DX, Thoma GR
Proc. 19th IEEE International Symposium on Computer-Based Medical Systems, June 2006, Salt Lake City, Utah; 905-10
(Abstract) (PDF)
Automatic Medical Image Annotation and Retrieval Using SECC
Yao J, Antani S, Long LR, Thoma GR, Zhang Z
Proc. 19th International Symposium on Computer-Based Medical Systems (CBMS 2006), June 2006, Salt Lake City, Utah; 105-10
(Abstract) (PDF)
Combining DOM Tree and Geometric Layout Analysis for Online Medical Journal Article Segmentation
Zou J, Le DX, Thoma GR
Proc. Joint Conference on Digital Libraries (JCDL), June 2006, Chapel Hill, NC; 119-28
(Abstract) (PDF)
Content Analysis of Uterine Cervix Images: Initial Steps Towards Content Based Indexing and Retrieval of Cervigrams
Gordon S, Zimmerman G, Long LR, Antani S, Jeronimo J, Greenspan H
Proc. of SPIE Vol. 6144 61444U-7
(Abstract) (PDF)
Design of a Digital Library for Early 20th Century Medico-legal Documents
Thoma GR, Mao S, Misra D, Rees J
Proc. ECDL 2006. Eds: Gonzalo J et al. Berlin: Springer-Verlag; LNCS 4172: 147-57.
(Abstract) (PDF)
Digital Tools for Collecting Data from Cervigrams for Research and Training in Colposcopy
Jeronimo J, Long R, Neve L, Bopf M, Antani K, Schiffman M
Journal of Lower Genital Tract Disease, 2006, 10(1):16-25.
(Abstract) (PDF)
Finding Relevant Passages in Scientific Articles: Fusion of Automatic Approaches vs. an Interactive Team Effort
Demner-Fushman D, Humphrey SM, Ide NC, Loane RF, Ruch P, Ruiz ME, Smith LH, Tanabe LK, Wilbur WJ, Aronson AR
Proc TREC 2006, 569-76
(Abstract) (PDF)
Generative Content Models for Structural Analysis of Medical Abstracts
Lin J, Karakos D, Demner-Fushman D, Khudanpur S
Proceedings of the 2006 Workshop on Biomedical Natural Language Processing (BioNLP'06), June 2006, New York City, New York
(Abstract) (PDF)
Historical Author Affiliations Assist Verification of Automatically Generated MEDLINE Citations
Sabir TF, Hauser SE, Thoma GR
Proc AMIA 2006
(Abstract) (PDF)
Interactive Publications: Creation and Usage
Thoma GR, Ford G, Chung M, Vasudevan K, Antani S
Proc. IS and T/SPIE Electronic Imaging 2006: Digital Publishing. San Jose, CA. Jan 15-19, 2006.
(Abstract) (PDF)
Medical Validation and CBIR of Spine X-ray Images over the Internet
Antani S, Cheng J, Long J, Long LR, Thoma GR
Proc. ISandT/SPIE Electronic Imaging Science and Technology 2006: Internet Imaging VII. San Jose. CA Jan 15-19, 2006, SPIE Vol. 6061 pp. 60610J (1-9).
(Abstract) (PDF)
MEDLINE as a Source of Just-in-Time Answers to Clinical Questions
Demner-Fushman D, Hauser SE, Humphrey SM, Ford GM, Jacobs JL, Thoma GR
Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006)
(Abstract) (PDF)
PICO as a Knowledge Representation for Clinical Questions
Huang X, Lin J, Demner-Fushman D
Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006)
(Abstract) (PDF)
Pre-Indexing for Fast Partial Shape Matching of Vertebrae Images
Xu X, Lee DJ, Antani S, Long RL
Proc. 19th International Symposium on Computer-Based Medical Systems (CBMS 2006), June 2006, Salt Lake City, Utah; 105-10
(Abstract) (PDF)
Preliminary Comparison of Three Search Engines for Point of Care Access to MEDLINE Citations
Hauser SE, Demner-Fushman D, Ford GM, Jacobs JL, Thoma GR
Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006)
(Abstract) (PDF)
Preparing Digitized Cervigrams for Colposcopy Research and Education: Determination of Optimal Resolution and Compression Parameters
Jeronimo J, Long R, Neve L, Ferris D, Noller K, Spitzer M, Mitra S, Guo J, Nutter B, Castle P, Herrero R, Rodriguez AC, Schiffman M
Journal of Lower Genital Tract Disease, Jan 2006, 10(1):39-44.
(Abstract) (PDF)
Semantic Processing to Enhance Retrieval of Diagnosis Citations from Medline
Sneiderman, C, Demner-Fushman D, Fiszman M, Rosemblat G, Lang FM, Norwood D, Rindflesch TC
Proceeding of the 2006 Annual Symposium of the American Medical Informatics Association (AMIA 2006)
(Abstract) (PDF)
Situated Question Answering in the Clinical Domain: Selecting the Best Drug Treatment for Diseases
Demner-Fushman D, Lin J
Proceedings of COLING/ACL 2006 Workshop on Task-Focused Summarization and Question Answering, July 2006, Sydney, Australia
(Abstract) (PDF)
Technology for Medical Education, Research, and Disease Screening by Exploitation of Biomarkers in a Large Collection of Uterine Cervix Images
Long RL, Antani S, Jeronimo J, Schiffman M, Bopf M, Neve L, Cornwall C, Budihas SC, Thoma GR
Proc. 19th International Symposium on Computer-Based Medical Systems (CBMS 2006), June 2006, Salt Lake City, Utah; 826-31
(Abstract) (PDF)
The Role of Knowledge in Conceptual Retrieval: A Study in the Domain of Clinical Medicine
Lin J, Demner-Fushman D
Proceedings of the 29th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR 2006), pages 99-106, August 2006, Seattle, Washington
(Abstract) (PDF)
 
Year 2005Back to top
Applying Vertebral Boundary Semantics to CBIR of Digitized Spine X-Ray Images
Antani SK, Long RL, Thoma GR
Proceedings SPIE Electronic Imaging Science and Technology, Conference on Storage and Retrieval Methods and Applications for Multimedia. 2005;5682:98-107.
(Abstract) (PDF)
A Probabilistic Approach to Segmentation and Classification of Neoplasia in Uterine Cervix Images Using Color and Geometric Features
Tulpule B, Hernes DL, Srinivasan Y, Mitra S, Sriraja Y, Nutter BS, Phillips B, Long RL, Ferris DG
SPIE Medical Imaging, February 2005; San Diego, CA; vol. 5748:995-1003.
(Abstract) (PDF)
Automated Cleanup Processing for Extracting Bibliographic Data from Biomedical Online Journals
Kim I, Le DX, Thoma GR
In: Callaos N, Lesso W, editors. SCI 2005. Proc. 9th World Multiconference on Systemics, Cybernetics and Informatics; 2005 Jul 10-13; Vol. 4; Orlando (FL): International Institute of Informatics and Systemics; c2005. 401-5.
(Abstract) (PDF)
Automated Labeling Of Biomedical Online Journal Articles
Kim J, Le DX, Thoma GR
In: Callaos N, Lesso W, editors. SCI 2005. Proc. 9th World Multiconference on Systemics, Cybernetics and Informatics; 2005 Jul 10-13; Vol. 4; Orlando (FL): International Institute of Informatics and Systemics; c2005. 406-11
(Abstract) (PDF)
Automated Metadata Extraction to Preserve the Digital Contents of Biomedical Collections
Thoma GR, Mao S, Misra D
Proc. 5th IASTED International Conference on Visualization, Imaging and Image Processing (VIIP 2005). September 2005. Benidorm, Spain; 214-19
(Abstract) (PDF)
Automatically Creating Biomedical Bibliographic Records from Printed Volumes of Old Indexe
Le DX, Thoma GR
In: Callaos N, Lesso W, editors. SCI 2005. Proc. 9th World Multiconference on Systemics, Cybernetics and Informatics; 2005 Jul 10-13; Vol. 3, Computer Science and Engineering. Orlando (FL): International Institute of Informatics and Systemics; c2005. 267-74
(Abstract) (PDF)
Design and Evaluation of a Curve Matching-based Spine X-ray Image Retrieval System
Lee D, Antani SK, Xu X, Long LR
SPIE Medical Imaging, February 2005; San Diego, CA; vol. 5748:365-373.
(Abstract) (PDF)
Design Strategies for a Prototype Electronic Preservation System for Biomedical Documents
Mao S, Misra D, Seamans J, Thoma GR
IS&T Archiving 2005 Conference, April 2005; 48-53.
(Abstract) (PDF)
Developing a Comprehensive System for Content-based Image Retrieval of Image and Text from a National Survey
Antani SK, Natarajan M, Long JL, Long RL, Thoma GR
SPIE Medical Imaging, February 2005; San Diego, CA; vol. 5748:152-161.
(Abstract) (PDF)
Evaluation of French and English MeSH Indexing Systems with a Parallel Corpus
Neveol A, Mork JG, Aronson AR, Darmoni SJ
AMIA Annu Symp Proc. 2005;:565-9
(Abstract) (PDF)
Image Informatics at a National Research Center
Long R, Antani SK, Thoma GR
Computerized Medical Imaging and Graphics, 2005. 29:171-193.
(Abstract) (PDF)
Image Informatics At A National Research Center
Long RL, Antani SK, Thoma GR
Computerized Medical Imaging and Graphics. 2005; 29 (2-3): 171-193.
(Abstract) (PDF)
Preliminary comparison of the SEER and PubMed search engines for answering clinical questions using PubMed on Tap, a PDA-based program for accessing biomedical literature
Sutton VR, Hauser SE
Proceedings of AMIA Annual Symposium, October 22-26, 2005, Washington, D.C.
(Abstract) (PDF)
Public Access to Anatomic Images
Thoma GR
Chapter in: Medical Informatics: Knowledge Management and Data Mining in Biomedicine
(Abstract) (PDF)
Relevance Feedback for Spine X-ray Retrieval
Xu X, Lee DJ, Antani S, Long LR
18th International Symposium on Computer-Based Medical Systems, 2005. Dublin, Ireland; pp. 197-202
(Abstract) (PDF)
Semantic Characteristics of MEDLINE Citations Useful for Therapeutic Decision-making
Sneiderman C, Demner-Fushman D, Fiszman M, Rindflesch TC
Proceedings of AMIA Annual Symposium, 2005;:1117.
(Abstract) (PDF)
The Role of Title, Metadata and Abstract in Identifying Clinically Relevant Journal Articles
Demner-Fushman D, Hauser SE, Thoma GR
Proceedings of AMIA Annual Symposium, October 22-26, 2005, Washington, D.C.
(Abstract) (PDF)
Unsupervised Style Classification of Document Page Images
Mao S, Nie L, Thoma GR
Proc. IEEE International Conference on Image Processing, September 2005, Genova, Italy; Vol. II: 510-13
(Abstract) (PDF)
 
Year 2004Back to top
A Dynamic Feature Generation System for Automated Metadata Extraction in Preservation of Digital Materials
Mao S , Kim J , Thoma G
Proc. International Workshop on Document Image Analysis for Libraries (DIAL2004). 2004 Jan;: 225-32.
(Abstract) (PDF)
An Architecture for Streamlining the Implementation of Biomedical Text/Image Databases on the Web
Bopf M, Coleman T, Long LR, Antani S, Thoma GR, Jeronimo J, Schiffman M
Proc. 17th IEEE Symposium on Computer-Based Medical Systems. 2004 June.;: 563-69.
(Abstract) (PDF)
Anterior Osteophyte Discimination in Lumbar Vertebrae Using Size-Invariant Features
Cherukuri M, Stanley RJ , Long R , Antani S , Thoma G
Computerized Medical Imaging and Graphics. 2004; 28: 99-108.
(Abstract) (PDF)
A Testbed System for Mobile Point-Of-Care Information Delivery
Hauser SE, Demner-Fushman D, Ford G, Thoma GR
Proc. 17th IEEE Symposium on Computer-Based Medical Systems. 2004 June;: 147-52.
(Abstract) (PDF)
A Tool for Collection of Region Based Data from Uterine Cervix Images for Correlation of Visual and Clinical Variables Related to Cervical Neoplasia
Jeronimo J, Schiffman M, Long LR, Neve L, Antani S
Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;:558-62.
(Abstract) (PDF)
A Usability Study of the PubMed on Tap User Interface for PDAs
Alexander GL, Hauser S, Steely K, Ford G, Demner-Fushman D
Medinfo. 2004 Sept.;2004: 1411-1415.
(Abstract) (PDF)
Automated Article Links Identification for Web-Based Online Medical Journals
Le DX, Thoma GR
Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;5:462-6.
(Abstract) (PDF)
Automated Labeling for Biomedical Journals Published in Foreign Languages
Kim J, Le DX, Thoma GR
Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;:444-9.
(Abstract) (PDF)
A Web-Based Paradigm for File Migration
Walker FL, Thoma GR
Proc. of IS and T's Archiving Conference. 2004 April.
(Abstract) (PDF)
Bayesian Learning of 2D Document Layout Models for Automated Preservation Metadata Extraction
Mao S, Thoma G
Proc. of the Fourth IASTED International Conference on Visualization, Imaging, and Image Processing (VIIP). 2004 Sept.;:329-34.
(Abstract) (PDF)
Content-Based Image Retrieval for Large Biomedical Image Archives
Antani S, Long R, Thoma GR
Medinfo. 2004 Sept.;2004: 829-833.
(Abstract) (PDF)
Curve Matching for Spine X-ray Image Retrieval Using Dynamic Programming
Xu X, Lee DJ, Antani S, Long LR
Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;12:172-6.
(Abstract) (PDF)
Evaluating Partial Shape Queries for Pathology-Based Retrieval of Verterbra
Shou J, Antani S, Long LR, Thoma GR
Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;12:155-60.
(Abstract) (PDF)
Image Analysis Techniques for Characterizing Disc Space Narrowing in Cervical Vertebrae
Chamarthy P , Stanley RJ , Cizek G , Long R , Antani S, Thoma G
Computerized Medical Imaging and Graphics. 2004; 28: 39-50.
(Abstract) (PDF)
Image Analysis Techniques for the Automated Evaluation of Subaxial Subluxation in Cervical Spine X-Ray Images
Stanley RJ, Seetharaman S, Long LR, Antani S, Thoma GR, Downey E
Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;: 204-9.
(Abstract) (PDF)
Knowledge-intensive and Statistical Approaches to the Retrieval and Annotation of Genomics MEDLINE Citations
Aronson AR, Demner-Fushman D, Humphrey SM, Ide NC, Kim W, Liu H, Loanne RR, Mork JG, Smith LH, Tanabe LK, Wilbur WJ, Xie N
Proc TREC 2004, 503-11
(Abstract) (PDF)
Multispectral Digital Cervigram Analyser in the Wavelet Domain for Early Detection of Cervical Cancer
Yang S , Guo J , King PS, Sriraja Y, Long LR
Proc. SPIE Medical Imaging. 2004 Feb; 5370.
(Abstract)
Organizing Literature Information for Clinical Decision Support
Demner-Fushman D, Hauser SE, Ford G, Thoma GR
MedInfo. 2004 Sept.;2004: 602-606.
(Abstract) (PDF)
Partial Shape Matching for CBIR of Spine X-Ray Images
Antani S, Xu X , Long R , Thoma G
Proc. SPIE Electronic Imaging - Storage and Retrieval Methods and Applications for Multimedia. 2004 Jan; 5307: 1-8.
(Abstract) (PDF)
Partial Shape Matching of Spine X-Ray Shapes Using Dynamic Programming
Xu X, Lee DJ, Antani S, Long LR
Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;: 97-102.
(Abstract) (PDF)
PubMed on Tap: Discovering Design Principles for Online Information Delivery to Handheld Computers
Hauser SE, Demner-Fushman D, Ford G, Thoma GR
MedInfo. 2004 Sept.;2004: 1430-1433.
(Abstract) (PDF)
Shape Based Retrieval in NHANES II
Tagare HD, Qian X, Fulbright RK, Long RL, Antani SK
Proceedings of the 12th Annual ACM International Conference on Multimedia. 2004. 776-779.
(Abstract) (PDF)
Shape Indexing in Medical Image Databases Using Pre-Shape Embedding
Qian X, Tagare HD, Fulbright R, Long R, Antani S
Proc. Distributed Databases and Processing in Medical Image Computing, MICCAI. 2004 Sept.;: 36-44.
(Abstract)
Style-Independent Document Labeling: Design and Performance Evaluation
Mao S , Kim J , Thoma G
Proc. SPIE - Document Recognition and Retrieval. 2004 Jan;: 14-22.
(Abstract) (PDF)
 
Year 2003Back to top
A Prototype Content-Based Image Retrieval System for Spine X-Rays
Long LR, Antani SK, Thoma GR
Proc. 16th IEEE Symposium on Computer-Based Medical Systems. 2003 June;: 156-62.
(Abstract) (PDF)
A SOAP-Based Tool for User Feedback and Analysis
Walker FL, Thoma GR
Proc. InfoToday. 2003 ;: 313-322.
(Abstract) (PDF)
Automated Document Labeling for Web-Based Online Medical Journals
Le DX, Thoma GR
Proc. 7th World Multiconference on Systemics, Cybernetics and Informatics. 2003 July;II: 411-15.
(Abstract) (PDF)
Automated Labeling Algorithms for Biomedical Document Images
Kim J, Le DX, Thoma GR
Proc. 7th World Multiconference on Systemics, Cybernetics and Informatics. 2003 July;V: 352-57.
(Abstract) (PDF)
Automated Labeling of Bibliographic Data Extracted from Biomedical Online Journals
Kim J, Le DX, Thoma GR
Proc. SPIE Electronic Imaging. 2003 Jan;5010: 47-56.
(Abstract) (PDF)
Biomedical Information from a National Collection of Spine X-Rays: Film to Content-Based Retrieval
Long LR, Antani S, Lee DJ, Krainak DM, Thoma GR
Proc. of SPIE Medical Imaging: PACS and Integrated Medical Information Systems. 2003 Feb;5033: 70-84.
(Abstract) (PDF)
Correcting OCR Text by Association with Historic Datasets
Hauser SE, Schlaifer J, Sabir TF, Demner-Fushman D, Thoma GR
Proc. SPIE Electronic Imaging. 2003 Jan;5010: 84-93.
(Abstract) (PDF)
Document Structure Analysis Algorithms: A Literature Survey
Mao S, Rosenfeld A, Kanungo T
Proc. SPIE Electronic Imaging. 2003 Jan;5010:197-207.
(Abstract) (PDF)
Evaluation of Shape Indexing Methods for Content-Based Retrieval of X-Ray Images
Antani S, Long LR, Lee DJ, Thoma GR
Proceedings of IS&T/SPIE Electronic Imaging Science and Technology, Storage and Retrieval for Media Databases. 2003 Jan; 5021: 405-16.
(Abstract) (PDF)
Extraction of Special Effects Caption Text Events from Digital Video
Crandall D, Antani S, Kasturi R
International Journal of Document Analysis and Recognition. 2003;5(2-3):138-57.
(Abstract) (PDF)
Generating Robust Features for Style-Independent Labeling of Bibliographic Fields in Medical Journal Articles
Mao S, Kim J, Le DX, Thoma GR
Proc. 7th World Multiconference on Systemics, Cybernetics and Informatics.2003 July;III:53-6.
(Abstract) (PDF)
Ground Truth Data for Document Image Analysis
Ford G, Thoma GR
Proceedings of 2003 Symposium on Document Image Understanding and Technology. 2003 April 9-11;: 199-205.
(Abstract) (PDF)
Hierarchical Segmentation of Vertebrae from X-ray Images
Zamora G, Sari-Sarraf H, Long LR
Proc. of SPIE Medical Imaging: Image Processing. 2003 Feb; 5032.
(Abstract) (PDF)
Localizing Contour Points for Indexing an X-Ray Image Retrieval System
Xu X, Lee DJ, Antani S, Long LR
Los Alamitos, CA: IEEE Computer Society. 2003 June;: 169-74.
(Abstract) (PDF)
OCR Correction Using Historical Relationships from Verified Text in Biomedical Citations
Hauser SE, Sabir TF, Thoma GR
Proc. of 2003 Symposium on Document Image Understanding Technology. College Park MD: Institute for Advanced Computer Studies, University of Maryland. 2003 April;: 171-7.
(Abstract) (PDF)
Similarity Measurement Using Polygon Curve Representation and Fourier Descriptors for Shape-Based Vertebral Image Retrieval
Lee DJ, Antani S, Long LR
Proc. of SPIE Medical Imaging: Image Processing. 2003;5032(3): 1283-91.
(Abstract) (PDF)
Stochastic Language Model for Style-Directed Physical Layout
Kanungo T, Mao S
Analysis of Documents IEEE Transactions on Image Processing. 2003 May;12 (5)5:583-596.
(Abstract) (PDF)
Vertebra Shape Classification using MLP for Content-Based Image Retrieval
Antani S, Long LR, Thoma GR, Stanley RJ
International Neural Networks Society and IEEE Neural Networks Society. 2003 July 2003;:160-65.
(Abstract) (PDF)
 
Year 2002Back to top
A Biomedical Information System for Combined Content-Based Retrieval of Spine X-ray Images and Associated Text Information
Antani S, Long LR, Thoma GR
3rd Indian Conference on Computer Vision, Graphics, and Image Processing. 2002 Dec.
(Abstract) (PDF)
A Method of Content-Based Retrieval for a Spinal X-Ray Image Database
Krainak DM, Long LR, Thoma GR
Proc. of SPIE Medical Imaging: PACS and Integrated Medical Systems. 2002 Feb;4685.
(Abstract) (PDF)
Analysis of the Feasibility of Using Active Shape Models for Segmentation of Gray Scale Images
Zamora G, Sari-Sarraf H, Mitra S, Long R
Proc. of SPIE Medical Imaging: Image Processing. 2002 Feb;4684:1370-81.
(Abstract)
A SOAP-Enabled System for an Online Library Service
Walker FL, Thoma GR
Proc. InfoToday 2002, Medford NJ: Information Today. 2002 May;:320-9.
(Abstract) (PDF)
A Survey on the Use of Pattern Recognition Methods for Abstraction
Antani S, Kasturi R, Jain R
Indexing and Retrieval of Images and Video Pattern Recognition Journal. 2002;35(4): 945-965.
(Abstract) (PDF)
Automated Data Entry System: Performance Issues
Thoma GR, Ford G
Proc. SPIE: Document Recognition and Retrieval IX. 2002 Jan;4670: 181-90.
(Abstract) (PDF)
Customized Hough Transform for Robust Segmentation of Cervical Vertebrae from X-Ray Images
Tezmol A, Sari-Sarraf H, Mitra S, Long R, Gururajan A
SSIAI. 2002;: 224-228.
(Abstract) (PDF)
Greek Alphabet Recognition Technique for Biomedical Documents
Le DX, Straughan SR, Thoma GR
Proc. 6th World Multiconference on Systemics, Cybernetics and Informatics, eds: Callaos N, et al. 2002 July;III: 86-91.
(Abstract) (PDF)
Identifying Image Structures for Content-Based Retrieval of Digitized Spine X-Rays
Long LR, Krainak DM, Thoma GR
Proc. of SPIE Medical Imaging: Image Processing. 2002 Feb; 4684.
(Abstract) (PDF)
Software Architecture of PSET: A Page Segmentation Evaluation Toolkit
Mao S, Kanungo T
International Journal on Document Analysis and Recognition. 2002 Mar;4(3):205-217.
(Abstract) (PDF)
Text Verification in an Automated System for the Extraction of Bibliographic Data
Thoma GR, Ford G, Le DX, Li Z
Proc. 5th International Workshop on Document Analysis Systems, Springer-Verlag: Berlin. 2002 Aug;: 423-32.
(Abstract) (PDF)
Trans-Pacific Demonstration of Visible Human
Nishinaga N, Tatsumi H, Gill M, Akashib A, Nogawa H, Reategui I
Space Communications. 2002 March; 17(4):303-311.
(Abstract) (PDF)
 
Year 2001Back to top
Approximate String Matching Algorithms for Limited-Vocabulary OCR Output Correction
Lasko TA, Hauser SE
Proc. SPIE, Document Recognition and Retrieval VIII. 2001 Jan;4307:232-40.
(Abstract) (PDF)
A Radius of Curvature Approach to Cervical Spine Vertebra Image Analysis
Stanley RJ, Long LR
Proc. 38th Annual Rocky Mountain Bioengineering Symposium, 37. 2001 Apr;: 385-90.
Automated Labeling in Document Images
Kim J, Le DX, Thoma GR
Proc. SPIE, Document Recognition and Retrieval VIII. 2001 Jan;4307:111-22.
(Abstract) (PDF)
Automated Medical Citation Records Creation for Web-Based Online Journals
Le DX, Tran LQ, Chow J, Kim J, Hauser SE, Moon CW, Thoma GR
Proc. 14th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2001.
(Abstract) (PDF)
Bridging Two Biomedical Journal Databases with XML - A Case Study
Pearson G, Moon CW
Proc. 14th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2001 Jul;:309-14.
(Abstract) (PDF)
Computer-Assisted Retrieval of Biomedical Image Features from Spine X-Rays: Progress and Prospects
Long LR, Thoma GR
Proceeding of the 14th IEEE Symposium on Computer-Based Medical Systems (CBMS). 2001 Jul;:46-50.
(Abstract) (PDF)
Empirical Performance Evaluation Methodology and its Application to Page Segmentation Algorithms
Mao S, Kanungo T
IEEE Transactions on Pattern Analysis and Machine Intelligence. 2001 Mar;23(3): 242-256.
(Abstract) (PDF)
Estimation of Orientation and Position of Cervical Vertebrae for Segmentation with Active Shape Models
Zamora G, Sari-Sarraf H, Mitra S, Long LR
Proc. SPIE Medical Imaging: Image Processing. 2001 Feb;4322:378-87.
Feature Indexing in a Database of Digitized X-Rays
Long LR, Thoma GR
Proc. of SPIE Storage and Retrieval for Media Databases. 2001 Jan;4315:393-403.
(Abstract) (PDF)
Identification and Classification of Spine Vertebrae by Automated Methods
Long LR, Thoma GR
Proc. SPIE Medical Imaging: Image Processing. 2001 Feb;:1478-89.
(Abstract) (PDF)
Landmarking and Feature Localization in Spine X-Rays
Long LR, Thoma GR
Journal of Electronic Imaging. 2002 Oct; 10(4):939-56.
(Abstract) (PDF)
Pattern Matching Techniques for Correcting Low Confidence OCR Words in a Known Context
Ford G, Hauser SE, Le DX, Thoma GR
Proc. SPIE., Document Recognition and Retrieval VIII. 2001 Jan;4307:241-9.
(Abstract) (PDF)
Proteus: A Model for Clinical Protocols Created from Knowledge Components
Shah H
Proc. 14th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2001 Jul;:59-64.
(Abstract) (PDF)
Stochastic Language Models for Automatic Acquisition of Lexicons from Printed Bilingual Dictionaries
Mao S, Kanungo T
Document Layout Interpretation and Its Application. 2001.
(Abstract) (PDF)
Web Page Downloading and Classification
Tran LQ, Moon CW, Le DX, Thoma GR
Proc. 14th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2001 Jul;:321-6.
(Abstract) (PDF)
 
Year 2000Back to top
Application of Planar Motion Segmentation for Scene Text Extraction
Gandhi T, Kasturi R, Antani S
Proc. of the 15th IEEE International Conference of Pattern Recognition. 2000 Sept.;1:1831-4.
(Abstract) (PDF)
Automated Zone Correction in Bitmapped Document Images
Hauser SE, Le DX, Thoma GR
SPIE: Document Recognition and Retrieval VII. 2000 Jan;3976: 248-58.
(Abstract) (PDF)
Automatic Training of Page Segmentation Algorithms: An Optimization Approach
Mao S, Kanungo T
International Conference on Pattern Recognition. 2000 Sept.;:531-534.
(Abstract) (PDF)
Empirical Performance Evaluation of Page Segmentation Algorithms
Mao S, Kanungo T
SPIE conference on Document Recognition and Retrieval. 2000 Jan.;:303-314.
(Abstract) (PDF)
Indexing of Image Content in Spine X-Rays
Long LR, Thoma GR
Proc. of SPIE Storage and Retrieval for Image and Video Databases VIII. 2000 Jan;3972:55-63.
(Abstract) (PDF)
Page Layout Classification Technique for Biomedical Documents
Le DX, Thoma GR
Proc. World Multiconference on Systems, Cybernetics and Informatics (SCI). 2000 Jul.;X: 348-52.
(Abstract) (PDF)
Read it to Me!
Walker FL, Thoma GR
Proc. 21st National Online Meeting. 2000 May;: 473-83.
(Abstract) (PDF)
Robust Extraction of Text in Video
Antani S, Crandall D, Kasturi R
International Conference of Pattern Recognition. 2000 Sept.;1:1445-9.
(Abstract) (PDF)
Segmentation and Image Navigation in Digitized Spine X-Rays
Long RL, Thoma GR
Proc. SPIE Medical Imaging: Image Processing. 2000 Feb; 3979: 168-79.
(Abstract) (PDF)
Some Connectivity and Security Issues of NGI in Medical Imaging Applications
Fan Y, Hwang K, Gill M, Huang HK
Journal of High Speed Networks. 2000;9: 3-13.
Use of Shape Models to Search Digitized Spine X-Rays
Long LR, Thoma GR
IEEE Computer-Based Medical Systems. 2000 June;: 255-60.
(Abstract) (PDF)
Web-Based Document Image Processing
Walker FL, Thoma GR
Proc. SPIE: Internet Imaging. 2000 Jan;:268-77.
(Abstract) (PDF)