| | Case Reports Epstein-barr virus induced cellular changes in nasal mucosa Matteo Gelardi, Marilena Tomaiuolo, Michele Cassano, Gaspare Besozzi, Maria Luisa Fiorella, Agata Calvario, Maria Antonia Castellano, and Pasquale Cassano Virol J. 2006; 3: 6. Published online 2006 February 1. doi: 10.1186/1743-422X-3-6.PMCID: PMC1388193 Crimean-Congo Haemorrhagic Fever in Kosova : a fatal case report Salih Ahmeti and Lul Raka Virol J. 2006; 3: 85. Published online 2006 October 12. doi: 10.1186/1743-422X-3-85.PMCID: PMC1624825 Debate Asymptomatic infection with highly pathogenic avian influenza H5N1 in wild birds: how sound is the evidence? Chris J Feare and Maï Yasué Virol J. 2006; 3: 96. Published online 2006 November 17. doi: 10.1186/1743-422X-3-96.PMCID: PMC1661592 Methodology A broadly applicable method to characterize large DNA viruses and adenoviruses based on the DNA polymerase gene Larry A Hanson, Mary R Rudis, Marcia Vasquez-Lee, and Roy D Montgomery Virol J. 2006; 3: 28. Published online 2006 April 11. doi: 10.1186/1743-422X-3-28.PMCID: PMC1459111 Application of functional genomics to the chimeric mouse model of HCV infection: optimization of microarray protocols and genomics analysis Kathie-Anne Walters, Michael A Joyce, Jill C Thompson, Sean Proll, James Wallace, Maria W Smith, Jeff Furlong, D Lorne Tyrrell, and Michael G Katze Virol J. 2006; 3: 37. Published online 2006 May 25. doi: 10.1186/1743-422X-3-37.PMCID: PMC1482685 Quantitative profiling of housekeeping and Epstein-Barr virus gene transcription in Burkitt lymphoma cell lines using an oligonucleotide microarray Michele Bernasconi, Christoph Berger, Jürg A Sigrist, Athos Bonanomi, Jens Sobek, Felix K Niggli, and David Nadal Virol J. 2006; 3: 43. Published online 2006 June 6. doi: 10.1186/1743-422X-3-43.PMCID: PMC1533810 Identification and classification of human cytomegalovirus capsids in textured electron micrographs using deformed template matching Martin Ryner, Jan-Olov Strömberg, Cecilia Söderberg-Nauclér, and Mohammed Homman-Loudiyi Virol J. 2006; 3: 57. Published online 2006 August 18. doi: 10.1186/1743-422X-3-57.PMCID: PMC1563456 New low-viscosity overlay medium for viral plaque assays Mikhail Matrosovich, Tatyana Matrosovich, Wolfgang Garten, and Hans-Dieter Klenk Virol J. 2006; 3: 63. Published online 2006 August 31. doi: 10.1186/1743-422X-3-63.PMCID: PMC1564390 Natural products that reduce rotavirus infectivity identified by a cell-based moderate-throughput screening assay Mark E Shaneyfelt, Anna D Burke, Joel W Graff, Mark A Jutila, and Michele E Hardy Virol J. 2006; 3: 68. Published online 2006 September 1. doi: 10.1186/1743-422X-3-68.PMCID: PMC1564392 Research The 3' sequences required for incorporation of an engineered ssRNA into the Reovirus genome Michael R Roner and Joanne Roehr Virol J. 2006; 3: 1. Published online 2006 January 3. doi: 10.1186/1743-422X-3-1.PMCID: PMC1352349 Shell Vial culture Assay for the rapid diagnosis of Japanese encephalitis, West Nile and Dengue-2 viral encephalitis Rangaiah S Jayakeerthi, Raghava V Potula, S Srinivasan, and S Badrinath Virol J. 2006; 3: 2. Published online 2006 January 6. doi: 10.1186/1743-422X-3-2.PMCID: PMC1360082 Analysis of the human cytomegalovirus genomic region from UL146 through UL147A reveals sequence hypervariability, genotypic stability, and overlapping transcripts Nell S Lurain, Andrea M Fox, Heather M Lichy, Sangeeta M Bhorade, Carl F Ware, Diana D Huang, Sau-Ping Kwan, Edward R Garrity, and Sunwen Chou Virol J. 2006; 3: 4. Published online 2006 January 12. doi: 10.1186/1743-422X-3-4.PMCID: PMC1360065 Use of recombinant lentivirus pseudotyped with vesicular stomatitis virus glycoprotein G for efficient generation of human anti-cancer chimeric T cells by transduction of human peripheral blood lymphocytes in vitro Anthony Simmons, Robert P Whitehead, Andrey A Kolokoltsov, and Robert A Davey Virol J. 2006; 3: 8. Published online 2006 February 28. doi: 10.1186/1743-422X-3-8.PMCID: PMC1413513 Cyclic cidofovir (cHPMPC) prevents congenital cytomegalovirus infection in a guinea pig model Mark R Schleiss, Jodi L Anderson, and Alistair McGregor Virol J. 2006; 3: 9. Published online 2006 March 1. doi: 10.1186/1743-422X-3-9.PMCID: PMC1525182 Pox proteomics: mass spectrometry analysis and identification of Vaccinia virion proteins Jennifer D Yoder, Tsefang S Chen, Cliff R Gagnier, Srilakshmi Vemulapalli, Claudia S Maier, and Dennis E Hruby Virol J. 2006; 3: 10. Published online 2006 March 1. doi: 10.1186/1743-422X-3-10.PMCID: PMC1540416 Genetic variability of the envelope gene of Type D simian retrovirus-2 (SRV-2) subtypes associated with SAIDS-related retroperitoneal fibromatosis in different macaque species Jeannette Philipp-Staheli, Taya Marquardt, Margaret E Thouless, A Gregory Bruce, Richard F Grant, Che-Chung Tsai, and Timothy M Rose Virol J. 2006; 3: 11. Published online 2006 March 6. doi: 10.1186/1743-422X-3-11.PMCID: PMC1450265 Panicovirus accumulation is governed by two membrane-associated proteins with a newly identified conserved motif that contributes to pathogenicity Jeffrey S Batten, Massimo Turina, and Karen-Beth G Scholthof Virol J. 2006; 3: 12. Published online 2006 March 8. doi: 10.1186/1743-422X-3-12.PMCID: PMC1421387 A phosphorylation map of the bovine papillomavirus E1 helicase Michael R Lentz, Stanley M Stevens, Jr, Joshua Raynes, and Nancy Elkhoury Virol J. 2006; 3: 13. Published online 2006 March 8. doi: 10.1186/1743-422X-3-13.PMCID: PMC1450263 Multicistronic lentiviral vectors containing the FMDV 2A cleavage factor demonstrate robust expression of encoded genes at limiting MOI Dhanalakshmi Chinnasamy, Michael D Milsom, James Shaffer, James Neuenfeldt, Aimen F Shaaban, Geoffrey P Margison, Leslie J Fairbairn, and Nachimuthu Chinnasamy Virol J. 2006; 3: 14. Published online 2006 March 15. doi: 10.1186/1743-422X-3-14.PMCID: PMC1459112 Genome comparison of two Coccolithoviruses Michael J Allen, Declan C Schroeder, Andrew Donkin, Katharine J Crawfurd, and William H Wilson Virol J. 2006; 3: 15. Published online 2006 March 22. doi: 10.1186/1743-422X-3-15.PMCID: PMC1440845 Inhibition of cytokine gene expression and induction of chemokine genes in non-lymphatic cells infected with SARS coronavirus Martin Spiegel and Friedemann Weber Virol J. 2006; 3: 17. Published online 2006 March 29. doi: 10.1186/1743-422X-3-17.PMCID: PMC1444920 Evaluation of three Polymerase chain reaction tests targeting morphological transforming region II, UL-83 gene and glycoprotein O gene for the detection of Human Cytomegalovirus genome in clinical specimens of immunocompromised patients in Chennai, India P Sowmya, HN Madhavan, and KL Therese Virol J. 2006; 3: 20. Published online 2006 March 30. doi: 10.1186/1743-422X-3-20.PMCID: PMC1435869 Amphotropic murine leukemia virus is preferentially attached to cholesterol-rich microdomains after binding to mouse fibroblasts Christiane Beer and Lene Pedersen Virol J. 2006; 3: 21. Published online 2006 April 2. doi: 10.1186/1743-422X-3-21.PMCID: PMC1483818 Application of real-time PCR to quantify hepatitis B virus DNA in chronic carriers in The Gambia Maimuna E Mendy, Steve Kaye, Marianne van der Sande, Pura Rayco-Solon, Pauline A Waight, Deborah Shipton, Dorka Awi, Paul Snell, Hilton Whittle, and Samuel J McConkey Virol J. 2006; 3: 23. Published online 2006 April 4. doi: 10.1186/1743-422X-3-23.PMCID: PMC1482686 Predicting the subcellular localization of viral proteins within a mammalian host cell MS Scott, R Oomen, DY Thomas, and MT Hallett Virol J. 2006; 3: 24. Published online 2006 April 4. doi: 10.1186/1743-422X-3-24.PMCID: PMC1475561 Expression of HIV receptors, alternate receptors and co-receptors on tonsillar epithelium: implications for HIV binding and primary oral infection Renu B Kumar, Diane M Maher, Mark C Herzberg, and Peter J Southern Virol J. 2006; 3: 25. Published online 2006 April 6. doi: 10.1186/1743-422X-3-25.PMCID: PMC1459853 Inhibition of histone deacetylation in 293GPG packaging cell line improves the production of self-inactivating MLV-derived retroviral vectors Diana E Jaalouk, Milena Crosato, Pnina Brodt, and Jacques Galipeau Virol J. 2006; 3: 27. Published online 2006 April 7. doi: 10.1186/1743-422X-3-27.PMCID: PMC1488828 Membrane-associated heparan sulfate is not required for rAAV-2 infection of human respiratory epithelia Michael P Boyle, Raymond A Enke, Jeffrey B Reynolds, Peter J Mogayzel, Jr, William B Guggino, and Pamela L Zeitlin Virol J. 2006; 3: 29. Published online 2006 April 22. doi: 10.1186/1743-422X-3-29.PMCID: PMC1459113 Genetic diversity among five T4-like bacteriophages James M Nolan, Vasiliy Petrov, Claire Bertrand, Henry M Krisch, and Jim D Karam Virol J. 2006; 3: 30. Published online 2006 May 23. doi: 10.1186/1743-422X-3-30.PMCID: PMC1524935 Effect of Ebola virus proteins GP, NP and VP35 on VP40 VLP morphology Reed F Johnson, Peter Bell, and Ronald N Harty Virol J. 2006; 3: 31. Published online 2006 May 23. doi: 10.1186/1743-422X-3-31.PMCID: PMC1502131 Combined fluticasone propionate and salmeterol reduces RSV infection more effectively than either of them alone in allergen-sensitized mice Rajeswari Singam, Prasanna K Jena, Sumita Behera, Gary R Hellermann, Richard F Lockey, Dennis Ledford, and Shyam S Mohapatra Virol J. 2006; 3: 32. Published online 2006 May 23. doi: 10.1186/1743-422X-3-32.PMCID: PMC1488829 VPg of murine norovirus binds translation initiation factors in infected cells Katie F Daughenbaugh, Christiane E Wobus, and Michele E Hardy Virol J. 2006; 3: 33. Published online 2006 May 23. doi: 10.1186/1743-422X-3-33.PMCID: PMC1481632 Contribution of cysteine residues in the extracellular domain of the F protein of human respiratory syncytial virus to its function Nicole D Day, Patrick J Branigan, Changbao Liu, Lester L Gutshall, Jianquan Luo, José A Melero, Robert T Sarisky, and Alfred M Del Vecchio Virol J. 2006; 3: 34. Published online 2006 May 24. doi: 10.1186/1743-422X-3-34.PMCID: PMC1540417 The temperature arrested intermediate of virus-cell fusion is a functional step in HIV infection Hamani I Henderson and Thomas J Hope Virol J. 2006; 3: 36. Published online 2006 May 25. doi: 10.1186/1743-422X-3-36.PMCID: PMC1482684 Expression and processing of the Hepatitis E virus ORF1 nonstructural polyprotein Deepak Sehgal, Saijo Thomas, Mahua Chakraborty, and Shahid Jameel Virol J. 2006; 3: 38. Published online 2006 May 26. doi: 10.1186/1743-422X-3-38.PMCID: PMC1481634 Isolation and characterization of a new simian rotavirus, YK-1 Larry E Westerman, Baoming Jiang, Harold M McClure, Lauren J Snipes-Magaldi, Dixie D Griffin, Gary Shin, Jon R Gentsch, and Roger I Glass Virol J. 2006; 3: 40. Published online 2006 May 31. doi: 10.1186/1743-422X-3-40.PMCID: PMC1524728 The role of single N-glycans in proteolytic processing and cell surface transport of the Lassa virus glycoprotein GP-C Robert Eichler, Oliver Lenz, Wolfgang Garten, and Thomas Strecker Virol J. 2006; 3: 41. Published online 2006 May 31. doi: 10.1186/1743-422X-3-41.PMCID: PMC1524727 Pathogenesis and vertical transmission of a transplacental rat cytomegalovirus Hwei-San Loh, Mohd-Azmi Mohd-Lila, Sheikh-Omar Abdul-Rahman, and Lik-Jun Kiew Virol J. 2006; 3: 42. Published online 2006 June 1. doi: 10.1186/1743-422X-3-42.PMCID: PMC1500997 ICP0 antagonizes Stat 1-dependent repression of herpes simplex virus: implications for the regulation of viral latency William P Halford, Carla Weisend, Jennifer Grace, Mark Soboleski, Daniel JJ Carr, John W Balliet, Yumi Imai, Todd P Margolis, and Bryan M Gebhardt Virol J. 2006; 3: 44. Published online 2006 June 9. doi: 10.1186/1743-422X-3-44.PMCID: PMC1557838 The synergistic effect of IFN-α and IFN-γ against HSV-2 replication in Vero cells is not interfered by the plant antiviral 1-cinnamoyl-3, 11-dihydroxymeliacarpin Erina Petrera and Celia E Coto Virol J. 2006; 3: 45. Published online 2006 June 13. doi: 10.1186/1743-422X-3-45.PMCID: PMC1525181 Quantitative estimation of Nipah virus replication kinetics in vitro Li-Yen Chang, AR Mohd Ali, Sharifah Syed Hassan, and Sazaly AbuBakar Virol J. 2006; 3: 47. Published online 2006 June 19. doi: 10.1186/1743-422X-3-47.PMCID: PMC1543632 Members of the Hyposoter didymator Ichnovirus repeat element gene family are differentially expressed in Spodoptera frugiperda L Galibert, G Devauchelle, F Cousserans, J Rocher, P Cérutti, M Barat-Houari, P Fournier, and AN Volkoff Virol J. 2006; 3: 48. Published online 2006 June 19. doi: 10.1186/1743-422X-3-48.PMCID: PMC1539012 Measles viral load may reflect SSPE disease progression M Kühne Simmonds , DWG Brown, and L Jin Virol J. 2006; 3: 49. Published online 2006 June 21. doi: 10.1186/1743-422X-3-49.PMCID: PMC1526435 The ability of flagellum-specific Proteus vulgaris bacteriophage PV22 to interact with Campylobacter jejuni flagella in culture EL Zhilenkov, VM Popova, DV Popov, LY Zavalsky, EA Svetoch, NJ Stern, and BS Seal Virol J. 2006; 3: 50. Published online 2006 June 27. doi: 10.1186/1743-422X-3-50.PMCID: PMC1538592 Human Immunodeficiency Virus type 1 in seronegative infants born to HIV-1-infected mothers Vázquez Pérez JA, Basualdo Sigales MC, Reyes-Terán G, Gudiño Rosales JC, and Soler Claudín C Virol J. 2006; 3: 52. Published online 2006 June 29. doi: 10.1186/1743-422X-3-52.PMCID: PMC1524729 Evidence of structural genomic region recombination in Hepatitis C virus Juan Cristina and Rodney Colina Virol J. 2006; 3: 53. Published online 2006 June 30. doi: 10.1186/1743-422X-3-53.PMCID: PMC1533811 Characterization of the IFN-γ T-cell responses to immediate early antigens in humans with genital herpes Ralph P Braun, Lendon G Payne, and Lichun Dong Virol J. 2006; 3: 54. Published online 2006 July 5. doi: 10.1186/1743-422X-3-54.PMCID: PMC1534022 Reemergence of dengue virus type-3 (subtype-III) in India: Implications for increased incidence of DHF & DSS Paban Kumar Dash, Man Mohan Parida, Parag Saxena, Ajay Abhyankar, CP Singh, KN Tewari, Asha Mukul Jana, K Sekhar, and PV Lakshmana Rao Virol J. 2006; 3: 55. Published online 2006 July 6. doi: 10.1186/1743-422X-3-55.PMCID: PMC1559593 Arbidol: a broad-spectrum antiviral that inhibits acute and chronic HCV infection Yury S Boriskin, Eve-Isabelle Pécheur, and Stephen J Polyak Virol J. 2006; 3: 56. Published online 2006 July 19. doi: 10.1186/1743-422X-3-56.PMCID: PMC1559594 Temperature sensitive influenza A virus genome replication results from low thermal stability of polymerase-cRNA complexes Rosa M Dalton, Anne E Mullin, Maria Joao Amorim, Elizabeth Medcalf, Laurence S Tiley, and Paul Digard Virol J. 2006; 3: 58. Published online 2006 August 25. doi: 10.1186/1743-422X-3-58.PMCID: PMC1569369 Green fluorescent protein as a reporter of prion protein folding Snezana Vasiljevic, Junyuan Ren, YongXiu Yao, Kevin Dalton, Catherine S Adamson, and Ian M Jones Virol J. 2006; 3: 59. Published online 2006 August 29. doi: 10.1186/1743-422X-3-59.PMCID: PMC1560372 Involvement of intracellular free Ca2+ in enhanced release of herpes simplex virus by hydrogen peroxide Emiko Arimoto, Soichi Iwai, Tetsuro Sumi, Yuzo Ogawa, and Yoshiaki Yura Virol J. 2006; 3: 62. Published online 2006 August 31. doi: 10.1186/1743-422X-3-62.PMCID: PMC1564391 Hepatitis C virus NS2 and NS3/4A proteins are potent inhibitors of host cell cytokine/chemokine gene expression Pasi Kaukinen, Maarit Sillanpää, Sergei Kotenko, Rongtuan Lin, John Hiscott, Krister Melén, and Ilkka Julkunen Virol J. 2006; 3: 66. Published online 2006 September 1. doi: 10.1186/1743-422X-3-66.PMCID: PMC1569370 Circulating viral core and E1 antigen levels as supplemental markers for HCV Chronic hepatitis Mostafa K El Awady, Yasmine S El Abd, Hussein A Shoeb, Ashraf A Tabll, Alaa El Din MS Hosny, Reem M El Shenawy, Khaled Atef, Noha G Bader El Din, and Mahmoud M Bahgat Virol J. 2006; 3: 67. Published online 2006 September 1. doi: 10.1186/1743-422X-3-67.PMCID: PMC1586018 The effects of N-terminal insertion into VSV-G of an scFv peptide Hanna Dreja and Marc Piechaczyk Virol J. 2006; 3: 69. Published online 2006 September 2. doi: 10.1186/1743-422X-3-69.PMCID: PMC1564393 Genetic analysis of Thailand hantavirus in Bandicota indica trapped in Thailand Jean-Pierre Hugot, Angelina Plyusnina, Vincent Herbreteau, Kirill Nemirov, Juha Laakkonen, Åke Lundkvist, Yupin Supputamongkol, Heikki Henttonen, and Alexander Plyusnin Virol J. 2006; 3: 72. Published online 2006 September 5. doi: 10.1186/1743-422X-3-72.PMCID: PMC1578555 Caveolin-1 interacts with the Gag precursor of murine leukaemia virus and modulates virus production Zheng Yu, Christiane Beer, Mario Koester, and Manfred Wirth Virol J. 2006; 3: 73. Published online 2006 September 6. doi: 10.1186/1743-422X-3-73.PMCID: PMC1570462 Altered gene expression in asymptomatic SHIV-infected rhesus macaques (Macacca mulatta) Erica E Carroll, Rasha Hammamieh, Nabarun Chakraborty, Aaron T Phillips, Stacy-Ann M Miller, and Marti Jett Virol J. 2006; 3: 74. Published online 2006 September 6. doi: 10.1186/1743-422X-3-74.PMCID: PMC1570341 High level expression of human epithelial β-defensins (hBD-1, 2 and 3) in papillomavirus induced lesions Kong T Chong, Liangbin Xiang, Xiaohong Wang, Eunjoo L Jun, Long-fu Xi, and John M Schweinfurth Virol J. 2006; 3: 75. Published online 2006 September 8. doi: 10.1186/1743-422X-3-75.PMCID: PMC1579216 Localization studies of two white spot syndrome virus structural proteins VP51 and VP76 Chenglin Wu and Feng Yang Virol J. 2006; 3: 76. Published online 2006 September 12. doi: 10.1186/1743-422X-3-76.PMCID: PMC1586196 S1 gene sequence analysis of a nephropathogenic strain of avian infectious bronchitis virus in Egypt Ahmed S Abdel-Moneim, Magdy F El-Kady, Brian S Ladman, and Jack Gelb, Jr Virol J. 2006; 3: 78. Published online 2006 September 20. doi: 10.1186/1743-422X-3-78.PMCID: PMC1592083 Observation of the low frequency vibrational modes of bacteriophage M13 in water by Raman spectroscopy KT Tsen, Eric C Dykeman, Otto F Sankey, Nien-Tsung Lin, Shaw-Wei D Tsen, and Juliann G Kiang Virol J. 2006; 3: 79. Published online 2006 September 22. doi: 10.1186/1743-422X-3-79.PMCID: PMC1592082 HIV-1 designed to use different tRNAGln isoacceptors prefers to select tRNAThr for replication Meng Li, Peter G Eipers, Na Ni, and Casey D Morrow Virol J. 2006; 3: 80. Published online 2006 September 26. doi: 10.1186/1743-422X-3-80.PMCID: PMC1592299 Analysis of in vitro replicated human hepatitis C virus (HCV) for the determination of genotypes and quasispecies Dennis Revie, Michael O Alberti, Ravi S Braich, Nickolas Chelyapov, David Bayles, John G Prichard, and S Zaki Salahuddin Virol J. 2006; 3: 81. Published online 2006 September 29. doi: 10.1186/1743-422X-3-81.PMCID: PMC1609102 Discovery of significant variants containing large deletions in the 5'UTR of human hepatitis C virus (HCV) Dennis Revie, Michael O Alberti, Ravi S Braich, David Bayles, John G Prichard, and S Zaki Salahuddin Virol J. 2006; 3: 82. Published online 2006 September 29. doi: 10.1186/1743-422X-3-82.PMCID: PMC1599722 Characterization of neutralizing epitopes within the major capsid protein of human papillomavirus type 33 Stefanie D Roth, Martin Sapp, Rolf E Streeck, and Hans-Christoph Selinka Virol J. 2006; 3: 83. Published online 2006 October 2. doi: 10.1186/1743-422X-3-83.PMCID: PMC1599721 Infection of human cytomegalovirus in cultured human gingival tissue Rong Hai, Alice Chu, Hongjian Li, Sean Umamoto, Paul Rider, and Fenyong Liu Virol J. 2006; 3: 84. Published online 2006 October 5. doi: 10.1186/1743-422X-3-84.PMCID: PMC1617094 Vaccinia virus replication is not affected by APOBEC3 family members Melanie Kremer, Yasemin Suezer, Yolanda Martinez-Fernandez, Carsten Münk, Gerd Sutter, and Barbara S Schnierle Virol J. 2006; 3: 86. Published online 2006 October 19. doi: 10.1186/1743-422X-3-86.PMCID: PMC1635045 Evidence of recombination in quasispecies populations of a Hepatitis C Virus patient undergoing anti-viral therapy María P Moreno, Didier Casane, Lilia López, and Juan Cristina Virol J. 2006; 3: 87. Published online 2006 October 24. doi: 10.1186/1743-422X-3-87.PMCID: PMC1635042 Genomic sequence and analysis of a vaccinia virus isolate from a patient with a smallpox vaccine-related complication Guiyun Li, Nanhai Chen, Zehua Feng, R Mark L Buller, John Osborne, Tiara Harms, Inger Damon, Chris Upton, and David J Esteban Virol J. 2006; 3: 88. Published online 2006 October 25. doi: 10.1186/1743-422X-3-88.PMCID: PMC1635044 Replication of a hepatitis C virus replicon clone in mouse cells Susan L Uprichard, Josan Chung, Francis V Chisari, and Takaji Wakita Virol J. 2006; 3: 89. Published online 2006 October 28. doi: 10.1186/1743-422X-3-89.PMCID: PMC1635043 Porcine reproductive and respiratory syndrome virus (PRRSV) infection spreads by cell-to-cell transfer in cultured MARC-145 cells, is dependent on an intact cytoskeleton, and is suppressed by drug-targeting of cell permissiveness to virus infection William A Cafruny, Richard G Duman, Grace HW Wong, Suleman Said, Pam Ward-Demo, Raymond RR Rowland, and Eric A Nelson Virol J. 2006; 3: 90. Published online 2006 November 2. doi: 10.1186/1743-422X-3-90.PMCID: PMC1635561 The changing epidemiology of dengue in Delhi, India Ekta Gupta, Lalit Dar, Geetanjali Kapoor, and Shobha Broor Virol J. 2006; 3: 92. Published online 2006 November 5. doi: 10.1186/1743-422X-3-92.PMCID: PMC1636631 The role of myristoylation in the membrane association of the Lassa virus matrix protein Z Thomas Strecker, Anna Maisa, Stephane Daffis, Robert Eichler, Oliver Lenz, and Wolfgang Garten Virol J. 2006; 3: 93. Published online 2006 November 5. doi: 10.1186/1743-422X-3-93.PMCID: PMC1647273 Serendipitous identification of natural Intergenotypic recombinants of hepatitis C in Ireland Isabelle Moreau, Susan Hegarty, John Levis, Patrick Sheehy, Orla Crosbie, Elizabeth Kenny-Walsh, and Liam J Fanning Virol J. 2006; 3: 95. Published online 2006 November 15. doi: 10.1186/1743-422X-3-95.PMCID: PMC1654145 A self-inactivating retrovector incorporating the IL-2 promoter for activation-induced transgene expression in genetically engineered T-cells Diana E Jaalouk, Laurence Lejeune, Clément Couture, and Jacques Galipeau Virol J. 2006; 3: 97. Published online 2006 November 21. doi: 10.1186/1743-422X-3-97.PMCID: PMC1679806 Distinct cellular responses differentiating alcohol- and hepatitis C virus-induced liver cirrhosis Sharon L Lederer, Kathie-Anne Walters, Sean Proll, Bryan Paeper, Shahar Robinzon, Loreto Boix, Nelson Fausto, Jordi Bruix, and Michael G Katze Virol J. 2006; 3: 98. Published online 2006 November 22. doi: 10.1186/1743-422X-3-98.PMCID: PMC1676004 The role of crude human saliva and purified salivary MUC5B and MUC7 mucins in the inhibition of Human Immunodeficiency Virus type 1 in an inhibition assay Habtom H Habte, Anwar S Mall, Corena de Beer, Zoë E Lotz, and Delawir Kahn Virol J. 2006; 3: 99. Published online 2006 November 24. doi: 10.1186/1743-422X-3-99.PMCID: PMC1676003 Small interfering RNA targeted to stem-loop II of the 5' untranslated region effectively inhibits expression of six HCV genotypes Ramesh Prabhu, Robert F Garry, and Srikanta Dash Virol J. 2006; 3: 100. Published online 2006 November 27. doi: 10.1186/1743-422X-3-100.PMCID: PMC1698915 Molecular and phylogenetic analyses of a new Amphotropic murine leukemia virus (MuLV-1313) Thomas M Howard, Zhijuan Sheng, Mingwu Wang, Yongchun Wu, and Suraiya Rasheed Virol J. 2006; 3: 101. Published online 2006 December 5. doi: 10.1186/1743-422X-3-101.PMCID: PMC1769482 Influenza A virus infection engenders a poor antibody response against the ectodomain of matrix protein 2 JingQi Feng, Manxin Zhang, Krystyna Mozdzanowska, Darya Zharikova, Henry Hoff, William Wunner, Robert B Couch, and Walter Gerhard Virol J. 2006; 3: 102. Published online 2006 December 6. doi: 10.1186/1743-422X-3-102.PMCID: PMC1702354 Comparative analysis of hepatitis C virus phylogenies from coding and non-coding regions: the 5' untranslated region (UTR) fails to classify subtypes Peter T Hraber, William Fischer, William J Bruno, Thomas Leitner, and Carla Kuiken Virol J. 2006; 3: 103. Published online 2006 December 14. doi: 10.1186/1743-422X-3-103.PMCID: PMC1764733 The role of cholesterol and sphingolipids in chemokine receptor function and HIV-1 envelope glycoprotein-mediated fusion Sherimay Ablan, Satinder S Rawat, Mathias Viard, Ji Ming Wang, Anu Puri, and Robert Blumenthal Virol J. 2006; 3: 104. Published online 2006 December 22. doi: 10.1186/1743-422X-3-104.PMCID: PMC1769366 Nectin-2-mediated entry of a syncytial strain of herpes simplex virus via pH-independent fusion with the plasma membrane of Chinese hamster ovary cells Mark G Delboy, Jennifer L Patterson, Aimee M Hollander, and Anthony V Nicola Virol J. 2006; 3: 105. Published online 2006 December 27. doi: 10.1186/1743-422X-3-105.PMCID: PMC1779275 Human coronavirus 229E encodes a single ORF4 protein between the spike and the envelope genes Ronald Dijkman, Maarten F Jebbink, Berry Wilbrink, Krzysztof Pyrc, Hans L Zaaijer, Philip D Minor, Sally Franklin, Ben Berkhout, Volker Thiel, and Lia van der Hoek Virol J. 2006; 3: 106. Published online 2006 December 28. doi: 10.1186/1743-422X-3-106.PMCID: PMC1774570 Reviews Retrograde transport pathways utilised by viruses and protein toxins Robert A Spooner, Daniel C Smith, Andrew J Easton, Lynne M Roberts, and J Michael Lord Virol J. 2006; 3: 26. Published online 2006 April 7. doi: 10.1186/1743-422X-3-26.PMCID: PMC1524934 Raman spectroscopy: the gateway into tomorrow's virology Phelps J Lambert, Audy G Whitman, Ossie F Dyson, and Shaw M Akula Virol J. 2006; 3: 51. Published online 2006 June 28. doi: 10.1186/1743-422X-3-51.PMCID: PMC1526436 No vaccine against HIV yet-are we not perfectly equipped? Mahender Singh Virol J. 2006; 3: 60. Published online 2006 August 29. doi: 10.1186/1743-422X-3-60.PMCID: PMC1563999 Short Reports Comparison of real-time PCR and hemagglutination assay for quantitation of human polyomavirus JC Moti L Chapagain, Taylor Nguyen, Thomas Bui, Saguna Verma, and Vivek R Nerurkar Virol J. 2006; 3: 3. Published online 2006 January 9. doi: 10.1186/1743-422X-3-3.PMCID: PMC1352366 RNAi dependent epigenetic marks on a geminivirus promoter Afzal Muhammad Dogar Virol J. 2006; 3: 5. Published online 2006 January 30. doi: 10.1186/1743-422X-3-5.PMCID: PMC1402257 Mutational analysis of the potential catalytic residues of the VV G1L metalloproteinase Kady M Honeychurch, Chelsea M Byrd, and Dennis E Hruby Virol J. 2006; 3: 7. Published online 2006 February 27. doi: 10.1186/1743-422X-3-7.PMCID: PMC1420270 Localization of deformed wing virus infection in queen and drone Apis mellifera L Julie Fievet, Diana Tentcheva, Laurent Gauthier, Joachim de Miranda, François Cousserans, Marc Edouard Colin, and Max Bergoin Virol J. 2006; 3: 16. Published online 2006 March 28. doi: 10.1186/1743-422X-3-16.PMCID: PMC1475838 Human cytomegalovirus UL27 is not required for viral replication in human tissue implanted in SCID mice Mark N Prichard, Debra C Quenelle, Deborah J Bidanset, Gloria Komazin, Sunwen Chou, John C Drach, and Earl R Kern Virol J. 2006; 3: 18. Published online 2006 March 29. doi: 10.1186/1743-422X-3-18.PMCID: PMC1448171 Testosterone correlates with Venezuelan equine encephalitis virus infection in macaques Michael P Muehlenbein, Frank B Cogswell, Mark A James, James Koterski, and George V Ludwig Virol J. 2006; 3: 19. Published online 2006 March 29. doi: 10.1186/1743-422X-3-19.PMCID: PMC1450264 Role of CD8+ cells in controlling replication of nonpathogenic Simian Immunodeficiency Virus SIVmac1A11 Koen KA Van Rompay, Emily J Blackwood, Gary Landucci, Don Forthal, and Marta L Marthas Virol J. 2006; 3: 22. Published online 2006 April 3. doi: 10.1186/1743-422X-3-22.PMCID: PMC1500998 Nucleotide mismatches between the VP7 gene and the primer are associated with genotyping failure of a specific lineage from G1 rotavirus strains Gabriel I Parra and Emilio E Espinola Virol J. 2006; 3: 35. Published online 2006 May 25. doi: 10.1186/1743-422X-3-35.PMCID: PMC1481633 In vitro inhibition of human influenza A virus replication by chloroquine Eng Eong Ooi, Janet Seok Wei Chew, Jin Phang Loh, and Robert CS Chua Virol J. 2006; 3: 39. Published online 2006 May 29. doi: 10.1186/1743-422X-3-39.PMCID: PMC1481635 Sexually transmitted Human Papillomavirus type variations resulting in high grade cervical dysplasia in North-East North Dakota and North-West Minnesota Lata Balakrishnan, Ryan Clauson, Timothy Weiland, Michelle Bianco, and Barry Milavetz Virol J. 2006; 3: 46. Published online 2006 June 15. doi: 10.1186/1743-422X-3-46.PMCID: PMC1550226 Deformed wing virus is not related to honey bees' aggressiveness Agnès Rortais, Diana Tentcheva, Alexandros Papachristoforou, Laurent Gauthier, Gérard Arnold, Marc Edouard Colin, and Max Bergoin Virol J. 2006; 3: 61. Published online 2006 August 30. doi: 10.1186/1743-422X-3-61.PMCID: PMC1560114 Analysis of vaccinia virus temperature-sensitive I7L mutants reveals two potential functional domains Megan J Moerdyk, Chelsea M Byrd, and Dennis E Hruby Virol J. 2006; 3: 64. Published online 2006 August 31. doi: 10.1186/1743-422X-3-64.PMCID: PMC1570340 Induction of neutralising antibodies by virus-like particles harbouring surface proteins from highly pathogenic H5N1 and H7N1 influenza viruses Judit Szécsi, Bertrand Boson, Per Johnsson, Pia Dupeyrot-Lacas, Mikhail Matrosovich, Hans-Dieter Klenk, David Klatzmann, Viktor Volchkov, and François-Loïc Cosset Virol J. 2006; 3: 70. Published online 2006 September 3. doi: 10.1186/1743-422X-3-70.PMCID: PMC1569823 Detection of seroconversion to West Nile virus, Usutu virus and Sindbis virus in UK sentinel chickens Alan Buckley, Alistair Dawson, and Ernest A Gould Virol J. 2006; 3: 71. Published online 2006 September 4. doi: 10.1186/1743-422X-3-71.PMCID: PMC1569371 Quantitative expression analysis of HHV-6 cell receptor CD46 on cells of human cord blood, peripheral blood and G-CSF mobilised leukapheresis cells Stefanie Thulke, Aleksandar Radonić, Andreas Nitsche, and Wolfgang Siegert Virol J. 2006; 3: 77. Published online 2006 September 19. doi: 10.1186/1743-422X-3-77.PMCID: PMC1584223 Genomic presence of recombinant porcine endogenous retrovirus in transmitting miniature swine Stanley I Martin, Robert Wilkinson, and Jay A Fishman Virol J. 2006; 3: 91. Published online 2006 November 2. doi: 10.1186/1743-422X-3-91.PMCID: PMC1635704 Rotavirus NSP4114-135 peptide has no direct, specific effect on chloride transport in rabbit brush-border membrane Mathie Lorrot and Monique Vasseur Virol J. 2006; 3: 94. Published online 2006 November 13. doi: 10.1186/1743-422X-3-94.PMCID: PMC1657008 Study Protocol SIV escape mutants in rhesus macaques vaccinated with NEF-derived lipopeptides and challenged with pathogenic SIVmac251 Pascale Villefroy, Franck Letourneur, Zoe Coutsinos, Lorenzo Mortara, Christian Beyer, Helene Gras-Masse, Jean-Gerard Guillet, and Isabelle Bourgault-Villada Virol J. 2006; 3: 65. Published online 2006 August 31. doi: 10.1186/1743-422X-3-65.PMCID: PMC1613241 |