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Year 2004
Fiszman M, Rindflesch TC, Kilicoglu H. Abstraction Summarization for Managing the Biomedical Research Literature . Proceedings of the HLT-NAACL Workshop on Computational Lexical Semantics. 2004;:76-83.
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Rosemblat G, Tse T, Gemoets D. Adapting A Monolingual Consumer Health System for Cross-Language Information Retrieval. Advances in Knowledge Organization, Proceedings of the Eighth International ISKO Conference. 2004 July;9:315-321.
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Ackerman MJ. Adopting New Technology Into Society: Going From an Idea to an Institution . Public Policy and Aging Report, 2004. 14(1):25.
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Mao S , Kim J , Thoma G. A Dynamic Feature Generation System for Automated Metadata Extraction in Preservation of Digital Materials . Proc. International Workshop on Document Image Analysis for Libraries (DIAL2004). 2004 Jan;: 225-32.
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Bodenreider O, Burgun A. Aligning Knowledge Sources in the UMLS: Methods, Quantitative Results, and Applications . Medinfo. 2004 Sept.;2004:327-331.
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Bopf M, Coleman T, Long LR, Antani S, Thoma GR, Jeronimo J, Schiffman M. An Architecture for Streamlining the Implementation of Biomedical Text/Image Databases on the Web . Proc. 17th IEEE Symposium on Computer-Based Medical Systems. 2004 June.;: 563-69.
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Cherukuri M, Stanley RJ , Long R , Antani S , Thoma G. Anterior Osteophyte Discimination in Lumbar Vertebrae Using Size-Invariant Features. Computerized Medical Imaging and Graphics. 2004; 28: 99-108.
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Kim GR , Aronson AR, Mork JG, Cohen BA, Lehmann CU. Application of a Medical Text Indexer to an Online Dermatology Atlas . MedInfo. 2004 Sept.;2004:.
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Gemoets D, Rosemblat G, Tse T, Logan R. Assessing Readability of Consumer Health Information: An Exploratory Study . Medinfo. 2004 Sept.;2004:869-73.
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Hauser SE, Demner-Fushman D, Ford G, Thoma GR. A Testbed System for Mobile Point-Of-Care Information Delivery . Proc. 17th IEEE Symposium on Computer-Based Medical Systems. 2004 June;: 147-52.
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Jeronimo J, Schiffman M, Long LR, Neve L, Antani S. A Tool for Collection of Region Based Data from Uterine Cervix Images for Correlation of Visual and Clinical Variables Related to Cervical Neoplasia. Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;:558-62.
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Alexander GL, Hauser S, Steely K, Ford G, Demner-Fushman D. A Usability Study of the PubMed on Tap User Interface for PDAs . Medinfo. 2004 Sept.;2004: 1411-1415.
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Le DX, Thoma GR. Automated Article Links Identification for Web-Based Online Medical Journals . Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;5:462-6.
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Kim J, Le DX, Thoma GR. Automated Labeling for Biomedical Journals Published in Foreign Languages . Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;:444-9.
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Walker FL, Thoma GR. A Web-Based Paradigm for File Migration. Proc. of IS and T's Archiving Conference. 2004 April.
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Mao S, Thoma G. Bayesian Learning of 2D Document Layout Models for Automated Preservation Metadata Extraction . Proc. of the Fourth IASTED International Conference on Visualization, Imaging, and Image Processing (VIIP). 2004 Sept.;:329-34.
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Sneiderman, CA, Ackerman, MJ. Cellular Radio Telecommunication for Health Care: Benefits and Risks. J Am Med Inform Assoc. 2004;11:479-481. DOI 10.1197/jamia.M1532.
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Choi J, Han SB, Kim S, Hole WT, Srinivasan S. Challenges for Integrating Korean Medical Vocabulary into the UMLS . MedInfo. 2004 Sept.;2004: 1554.
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Zhang S, Bodenreider O. Comparing Associative Relationships Among Equivalent Concepts Across Ontologies . MedInfo. 2004 Sept.;2004: 459-463.
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Ackerman MJ. Computer Briefs: Internet Telephone Service. J. Med. Pract. Manag.,2004. 20(2):88-89.
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Ackerman MJ. Computer Briefs: Wireless Networking - 802.11?. J. Med. Pract. Manag., 2004. 19(4):198-199.
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Ackerman MJ. Computer Briefs: Wireless Networking - Security. J. Med. Pract. Manag., 2004. 19(6):299-300.
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Antani S, Long R, Thoma GR. Content-Based Image Retrieval for Large Biomedical Image Archives . Medinfo. 2004 Sept.;2004: 829-833.
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Xu X, Lee DJ, Antani S, Long LR. Curve Matching for Spine X-ray Image Retrieval Using Dynamic Programming. Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;12:172-6.
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Gillen JE, Tse T, Ide NC, McCray AT. Design, Implementation and Management of a Web-based Data Entry System for ClinicalTrials.gov . Medinfo. 2004 Sept.;2004:1466-70.
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Mitchell JA, Fun J, McCray AT. Design of Genetics Home Reference: A New NLM Consumer Health Resource . Journal of the American Medical Informatics Association. 2004 Nov.;11(6):439-447.
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Slaughter LA, Rindflesch TC. Development of a Test Collection of Manually Extracted Semantic Relationships in Health Consumer Texts . MedInfo. 2004 Sept.;2004: 1865.
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Fontelo P , Ackerman M , Kim G. Development of Evidence-Based Medicine Resources: Bridging Clinical Research to Medical Practice . Proc. of the 37th Annual Hawaii International Conference on System Sciences (HICSS'04) - Track 6. ISBN:0-7695-2056-1 IEEE. 2004;6: 2004.
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Logan RA. Evaluating Consumer Informatics: Learning from Health Campaign Research . Medinfo. 2004;2004:1147-51.
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Shou J, Antani S, Long LR, Thoma GR. Evaluating Partial Shape Queries for Pathology-Based Retrieval of Verterbra. Proc. 8th World Multiconference on Systemics, Cybernetics and Informatics. 2004 Jul.;12:155-60.
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Fontelo P, Ackerman M. Evidence-Based Medicine Needs Easy-To-Use Handheld Tools for Universal Utilization . Medscape General Medicine. www.medscape.com. 2004 Sept. 6(3).
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Divita G, Tse T, Roth L. Failure Analysis of MetaMap Transfer (MMTx) . Medinfo. 2004 Sept.;2004:763-7.
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Bodenreider O, Aubry M, Burgun A. From Functional Similarity Among Gene Products to Dependence Relations Among Gene Ontology Terms (Abstract). Proceedings of the second conference on Standards and Ontologies for Functional Genomics (SOFG 2) 2004:53.
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Wang H, Azuaje F, Bodenreider O, Dopazo J. Gene Expression Correlation and Gene Ontology-Based Similarity: An Assessment of Quantitative Relationships . Proceedings of the 2004 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB'2004) 2004:25-31.
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Azuaje FJ, Bodenreider O, Wang H, Dopazo J. Gene Ontology-Driven Similarity for Gene Expression Correlation Analysis . Proceedings of the second conference on Standards and Ontologies for Functional Genomics (SOFG 2) 2004:47.
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Sarkar IN, Cantor MN, Bodenreider O, Lussier YA. GenesTraceTM: Biological Knowledge Discovery via Structured Terminology . MedInfo.
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Sehgal AK, Srinivasan P, Bodenreider O. Gene Terms and English Words: An Ambiguous Mix . Proceedings of the SIGIR 2004 Workshop on Search and Discovery in Bioinformatics 2004.
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Soergel D, Tse T, Slaughter L. Helping Healthcare Consumers Understand: An "Interpretive Layer" for Finding and Making Sense of Medical Information . Medinfo. 2004 Sept.;2004:931-5.
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Logan RA, Park J, Shin JH. How Two Korean Newspapers Covered a Public Health Crisis. Science Communication. 25:4:365-389 (June 2004)
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Rodgers RBC, Sherwin Z, Lamberts H, Okkes IM. ICPC Multilingual Collaboratory: A Web-and Unicode-Based System for Distributed Editing/Translating/Viewing of the Multilingual International Classification of Primary Care . MedInfo. 2004 Sept.;2004: 425-429.
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Bernhardt PJ, Rindflesch TC, Kilicoglu H, Tringali M. Identifying Anatomical Concepts in Biomedical Text for Automatic Selection of Images . Medinfo. 2004 Sept.;2004: 1521.
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Chapman WW, Fiszman M, Dowling JN, Chapman BE, Rindflesch TC. Identifying Respiratory Findings in Emergency Department Reports for Biosurveillance using MetaMap . Medinfo. 2004 Sept.;2004: 487-491.
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Chamarthy P , Stanley RJ , Cizek G , Long R , Antani S, Thoma G. Image Analysis Techniques for Characterizing Disc Space Narrowing in Cervical Vertebrae . Computerized Medical Imaging and Graphics. 2004; 28: 39-50.
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Stanley RJ, Seetharaman S, Long LR, Antani S, Thoma GR, Downey E. Image Analysis Techniques for the Automated Evaluation of Subaxial Subluxation in Cervical Spine X-Ray Images. Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;: 204-9.
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Bodenreider O, Azuaje F. Incorporating Ontology-Driven Similarity Knowledge Into Functional Genomics: An Exploratory Study . Proceedings of the 2004 IEEE Fourth Symposium on Bioinformatics and Bioengineering (BIBE-2004) 2004:317-324.
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Zhang S , Bodenreider O . Investigating Implicit Knowledge in Ontologies with Application to the Anatomical Domain . Altman RB, Dunker AK, Hunter L, Jung TA, Klein TE, editors. Pacific Symposium on Biocomputing 2004: World Scientific. 2004;: 250-261.
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Aronson AR, Demner-Fushman D, Humphrey SM, Ide NC, Kim W, Liu H, Loanne RR, Mork JG, Smith LH, Tanabe LK, Wilbur WJ, Xie N. Knowledge-intensive and Statistical Approaches to the Retrieval and Annotation of Genomics MEDLINE Citations. Proc TREC 2004, 503-11
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Lord AM. Learning The "Washington Way": The United States Public Health Service and the History of Sex Education.
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Zhang S, Mork P, Bodenreider O. Lessons Learned from Aligning two Representations of Anatomy . In: Hahn U, Schulz S, Cornet R, editors. Proceedings of the First International Workshop on Formal Biomedical Knowledge Representation (KR-MED 2004); 2004. p. 102-108.
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Lomax J, McCray AT. Mapping the Gene Ontology Into the Unified Medical Language System. Comparative and Functional Genomics
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Kayaalp M. Methods for Diagnosing Physiological Conditions of Human Subjects from Multivariate Time Series Biosensor Data . Physiological Data Modeling Contest, the Twenty-First International Conference on Machine Learning (ICML), 2004 July.
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Zhang Z. Methods to Visualize Interiors of Human Colons in Volumetric Datasets . MedInfo. 2004 Sept.;2004: 1931.
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Yang S , Guo J , King PS, Sriraja Y, Long LR. Multispectral Digital Cervigram Analyser in the Wavelet Domain for Early Detection of Cervical Cancer. Proc. SPIE Medical Imaging. 2004 Feb; 5370.
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Demner-Fushman D, Hauser SE, Ford G, Thoma GR. Organizing Literature Information for Clinical Decision Support . MedInfo. 2004 Sept.;2004: 602-606.
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Antani S, Xu X , Long R , Thoma G . Partial Shape Matching for CBIR of Spine X-Ray Images . Proc. SPIE Electronic Imaging - Storage and Retrieval Methods and Applications for Multimedia. 2004 Jan; 5307: 1-8.
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Xu X, Lee DJ, Antani S, Long LR. Partial Shape Matching of Spine X-Ray Shapes Using Dynamic Programming. Proc. 17th IEEE Symposium on Computer-Based Medical Systems: IEEE Computer Society. 2004 June.;: 97-102.
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Logan RA, Shin JH, Park J. Prevailing Impressions of Social Actors in Korean News Coverage of a Public Health Crisis . Science Communication. 25:4:399-418 (June 2004)
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Hauser SE, Demner-Fushman D, Ford G, Thoma GR. PubMed on Tap: Discovering Design Principles for Online Information Delivery to Handheld Computers . MedInfo. 2004 Sept.;2004: 1430-1433.
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Bodenreider O, Nelson SJ. RxNav: A Semantic Navigation Tool for Clinical Drugs . Medinfo. 2004 Sept.;2004: 1530.
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Tagare HD, Qian X, Fulbright RK, Long RL, Antani SK. Shape Based Retrieval in NHANES II . Proceedings of the 12th Annual ACM International Conference on Multimedia. 2004. 776-779.
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Qian X, Tagare HD, Fulbright R, Long R, Antani S. Shape Indexing in Medical Image Databases Using Pre-Shape Embedding . Proc. Distributed Databases and Processing in Medical Image Computing, MICCAI. 2004 Sept.;: 36-44.
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Tringali M, Rindflesch TC, Kilicoglu H, Fiszman M, Bodenreider O. Strategies for Mapping Concepts in Gastrointestinal Endoscopy Reports to the UMLS Metathesaurus . Medinfo. 2004 Sept.;2004: 1885.
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McCray AT, Ide NC, Loane RR, Tse T. Strategies for Supporting Consumer Health Information Seeking . Medinfo. 2004 Sept.;2004:1152-6.
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Mao S , Kim J , Thoma G. Style-Independent Document Labeling: Design and Performance Evaluation . Proc. SPIE - Document Recognition and Retrieval. 2004 Jan;: 14-22.
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Fiszman M, Rindflesch TC, Kilicoglu H. Summarization of an Online Medical Encyclopedia . MedInfo. 2004 Sept.;2004: 506-510.
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Kingsland LC III, Prettyman MF, Shooshan SE. The NLM Gateway: A Metasearch Engine for Disparate Resources . Medinfo. 2004 Sept.;2004: 52-56.
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Aronson AR, Mork JG, Gay CW, Humphrey SM, Rogers WJ. The NLM Indexing Initiative's Medical Text Indexer . Medinfo. 2004 Sept.;2004: 268-272.
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Bodenreider O, Smith B, Burugn A. The Ontology-Epistemology Divide: A Case Study in Medical Terminology . Proceedings of the Third International Conference on Formal Ontology in Information Systems (FOIS2004): IOS Press; 2004. p. 185-195.
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Bodenreider O . The Unified Medical Language System (UMLS): Integrating Biomedical Terminology . Nucleic Acids Res; Database Issue. 2004;32: 267-70.
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Fletcher A , Yoo T.S. . Toward Public Volume Database Management: A Case Study of NOVA: The National Online Volumetric Archive. Medical Imaging 2004, PACS and Imaging Informatics. Proc. of SPIE. 2004 Feb;:5371.
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Libbus B, Kilicoglu H, Rindflesch TC, Mork JG, Aronson AR. Using Natural Languge Processing, Locus Link, and the Gene Ontology to Compare OMIM to MEDLINE . Proceedings of the HLT-NAACL Workshop on Linking the Biological Literature, Ontologies and Databases: Tools for Users. 2004;:69-76.
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Leroy G, Rindflesch TC. Using Symbolic Knowledge in the UMLS to Disambiguate Words in Small Datasets with a Naive Bayes Classifier . Medinfo. 2004 Sept.;2004: 381-385.
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Ackerman MJ. Visible Human Project. McGraw-Hill Yearbook of Science & Technology 2004, McGraw-Hill, New York, New York, 2004. 369-372.
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