| | Research Articles On the MIAME Standards and Central Repositories of Microarray Data Steve Oliver Comp Funct Genomics. 2003 February; 4(1): 1. doi: 10.1002/cfg.238.PMCID: PMC2447402 Comp Funct Genomics. 2003 February; 4(1): 2–3. doi: 10.1002/cfg.257.PMCID: PMC2447386 A Relational Database for the Discovery of Genes Encoding Amino
Acid Biosynthetic Enzymes in Pathogenic Fungi Peter F. Giles, Darren M. Soanes, and Nicholas J. Talbot Comp Funct Genomics. 2003 February; 4(1): 4–15. doi: 10.1002/cfg.236.PMCID: PMC2447380 The HUPO Proteomics Standards Initiative Meeting: Towards Common
Standards for Exchanging Proteomics Data Sandra Orchard, Paul Kersey, Henning Hermjakob, and Rolf Apweiler Comp Funct Genomics. 2003 February; 4(1): 16–19. doi: 10.1002/cfg.232.PMCID: PMC2447389 The European Conference on Computational Biology 2002 Clare Sansom Comp Funct Genomics. 2003 February; 4(1): 20–24. doi: 10.1002/cfg.256.PMCID: PMC2447376 Genomics and Ethics: The Case of Cloned and/or Transgenic
Animals Béatrice de Montera Comp Funct Genomics. 2003 February; 4(1): 26–30. doi: 10.1002/cfg.243.PMCID: PMC2447398 Why Chloroplasts and Mitochondria Contain Genomes John F. Allen Comp Funct Genomics. 2003 February; 4(1): 31–36. doi: 10.1002/cfg.245.PMCID: PMC2447392 The S. Cerevisiae HAP Complex, a Key Regulator of
Mitochondrial Function, Coordinates Nuclear and Mitochondrial Gene
Expression S. Buschlen, J-M Amillet, B. Guiard, A. Fournier, C. Marcireau, and M. Bolotin-Fukuhara Comp Funct Genomics. 2003 February; 4(1): 37–46. doi: 10.1002/cfg.254.PMCID: PMC2447382 Early Gene Expression in Wounded Human Keratinocytes Revealed by
DNA Microarray Analysis Manal A. Dayem, Chimène Moreilhon, Laurent Turchi, Virginie Magnone, Richard Christen, Gilles Ponzio, and Pascal Barbry Comp Funct Genomics. 2003 February; 4(1): 47–55. doi: 10.1002/cfg.239.PMCID: PMC2447387 Pressures in Archaeal Protein Coding Genes: A Comparative Study Sujay Chattopadhyay, Satyabrata Sahoo, William A. Kanner, and Jayprokas Chakrabarti Comp Funct Genomics. 2003 February; 4(1): 56–65. doi: 10.1002/cfg.246.PMCID: PMC2447400 The ESF Programme on ‘Integrated Approaches to Functional
Genomics’. Workshop on ‘Ontology for Biology’ Luca Bernardi, Isabel Rojas, and Paul van der Vet Comp Funct Genomics. 2003 February; 4(1): 68–70. doi: 10.1002/cfg.252.PMCID: PMC2447391 The Gene Ontology Annotation (GOA) Project—Application of GO in
SWISS-PROT, TrEMBL and InterPro Evelyn Camon, Daniel Barrell, Catherine Brooksbank, Michele Magrane, and Rolf Apweiler Comp Funct Genomics. 2003 February; 4(1): 71–74. doi: 10.1002/cfg.235.PMCID: PMC2447390 Automatic Classification of Protein Functions From the Literature Christian Blaschke and Alfonso Valencia Comp Funct Genomics. 2003 February; 4(1): 75–79. doi: 10.1002/cfg.241.PMCID: PMC2447397 An Upper-Level Ontology for the Biomedical Domain Alexa T. McCray Comp Funct Genomics. 2003 February; 4(1): 80–84. doi: 10.1002/cfg.255.PMCID: PMC2447396 Developing a Protein-Interactions Ontology Esther Ratsch, Jörg Schultz, Jasmin Saric, Philipp Cimiano Lavin, Ulrike Wittig, Uwe Reyle, and Isabel Rojas Comp Funct Genomics. 2003 February; 4(1): 85–89. doi: 10.1002/cfg.244.PMCID: PMC2447378 Bringing Ontology to the Gene Ontology Jennifer Williams and William Andersen Comp Funct Genomics. 2003 February; 4(1): 90–93. doi: 10.1002/cfg.253.PMCID: PMC2447385 Turning Informal Thesauri Into Formal Ontologies: A Feasibility
Study on Biomedical Knowledge re-Use Udo Hahn Comp Funct Genomics. 2003 February; 4(1): 94–97. doi: 10.1002/cfg.247.PMCID: PMC2447399 The Semantic Web—New Ways to Present and Integrate Information Steffen Staab Comp Funct Genomics. 2003 February; 4(1): 98–103. doi: 10.1002/cfg.240.PMCID: PMC2447388 Some Tools and Methodologies for Domain Ontology Building Aldo Gangemi Comp Funct Genomics. 2003 February; 4(1): 104–110. doi: 10.1002/cfg.242.PMCID: PMC2447375 How a Philosophical Theory of Causation May Help in Ontological Engineering Daniel von Wachter Comp Funct Genomics. 2003 February; 4(1): 111–114. doi: 10.1002/cfg.258.PMCID: PMC2447394 Standards and Ontologies for Functional Genomics: Towards Unified Ontologies for Biology and Biomedicine Midori A. Harris and Helen Parkinson Comp Funct Genomics. 2003 February; 4(1): 116–120. doi: 10.1002/cfg.249.PMCID: PMC2447377 Building a Cell and Anatomy Ontology of Caenorhabditis Elegans
Raymond Y. N. Lee and Paul W. Sternberg Comp Funct Genomics. 2003 February; 4(1): 121–126. doi: 10.1002/cfg.248.PMCID: PMC2447384 The MGED Ontology: A Framework for Describing Functional Genomics
Experiments Christian J. Stoeckert, Jr. and Helen Parkinson Comp Funct Genomics. 2003 February; 4(1): 127–132. doi: 10.1002/cfg.234.PMCID: PMC2447379 Building Ontologies in DAML + OIL Robert Stevens, Chris Wroe, Sean Bechhofer, Phillip Lord, Alan Rector, and Carole Goble Comp Funct Genomics. 2003 February; 4(1): 133–141. doi: 10.1002/cfg.233.PMCID: PMC2447401 ESF Programme on ‘Integrated Approaches for Functional
Genomics’ Workshop on ‘Modelling of Molecular
Networks’ Paulino Gomez-Puertas and Alfonso Valencia Comp Funct Genomics. 2003 February; 4(1): 144–147. doi: 10.1002/cfg.224.PMCID: PMC2447393 An Approach to Inferring Transcriptional Regulation Among Genes
From Large-Scale Expression Data Javier Herrero, Ramón Díaz-Uriarte, and Joaquín Dopazo Comp Funct Genomics. 2003 February; 4(1): 148–154. doi: 10.1002/cfg.237.PMCID: PMC2447383 Attractive Models: How to Make the Silicon Cell Relevant and
Dynamic Hans V. Westerhoff, Frank Bruggeman, Jan-Hendrik S. Hofmeyr, and Jacky L. Snoep Comp Funct Genomics. 2003 February; 4(1): 155–158. doi: 10.1002/cfg.205.PMCID: PMC2447395 Current Awareness on Comparative and Functional Genomics Comp Funct Genomics. 2003 February; 4(1): 161–168. doi: 10.1002/cfg.226.PMCID: PMC2447381 |