| | Research Articles RNA binding strategies of ribosomal proteins. D E Draper and L P Reynaldo PMCID: PMC148190 Analysis of internal (n-1)mer deletion sequences in synthetic oligodeoxyribonucleotides by hybridization to an immobilized probe array. D Chen, Z Yan, D L Cole, and G S Srivatsa PMCID: PMC148191 Identification of promoter elements in mycobacteria: mutational analysis of a highly symmetric dual promoter directing the expression of replication genes of the Mycobacterium plasmid pAL5000. P Stolt, Q Zhang, and S Ehlers PMCID: PMC148192 Detailed analysis of stem I and its 5' and 3' neighbor regions in the trans-acting HDV ribozyme. F Nishikawa, M Roy, H Fauzi, and S Nishikawa PMCID: PMC148193 Exogenous expression of a dominant negative RORalpha1 vector in muscle cells impairs differentiation: RORalpha1 directly interacts with p300 and myoD. P Lau, P Bailey, D H Dowhan, and G E Muscat PMCID: PMC148194 Immunological analysis of potato leafroll luteovirus (PLRV) P1 expression identifies a 25 kDa RNA-binding protein derived via P1 processing. D Prüfer, L Kawchuk, M Monecke2, S Nowok, R Fischer, and W Rohde PMCID: PMC148195 A vector based on the SV40 origin of replication and chromosomal S/MARs replicates episomally in CHO cells. C Piechaczek, C Fetzer, A Baiker, J Bode, and H J Lipps PMCID: PMC148196 Identification of a stem-loop structure important for polyadenylation at the murine IgM secretory poly(A) site. C Phillips, C B Kyriakopoulou, and A Virtanen PMCID: PMC148197 Alternative function of a protein kinase homology domain in 2', 5'-oligoadenylate dependent RNase L. B Dong and R H Silverman PMCID: PMC148198 The ability of the HIV-1 AAUAAA signal to bind polyadenylation factors is controlled by local RNA structure. B I Klasens, M Thiesen, A Virtanen, and B Berkhout PMCID: PMC148199 Pogo transposase contains a putative helix-turn-helix DNA binding domain that recognises a 12 bp sequence within the terminal inverted repeats. H Wang, E Hartswood, and D J Finnegan PMCID: PMC148200 A key role for replication factor C in DNA replication checkpoint function in fission yeast. N Reynolds, P A Fantes, and S A MacNeill PMCID: PMC148201 RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants. Y Kagaya, K Ohmiya, and T Hattori PMCID: PMC148202 A re-investigation of the thio effect at the hammerhead cleavage site. E C Scott and O C Uhlenbeck PMCID: PMC148203 Structural requirements of the higher order RNA kissing element in the enteroviral 3'UTR. J Wang, J M Bakkers, J M Galama, H J Bruins Slot, E V Pilipenko, V I Agol, and W J Melchers PMCID: PMC148204 Increased levels of E2F-1-dependent DNA binding activity after UV- or gamma-irradiation. M Höfferer, C Wirbelauer, B Humar, and W Krek PMCID: PMC148205 Insertion of dGMP and dAMP during in vitro DNA synthesis opposite an oxidized form of 7,8-dihydro-8-oxoguanine. V Duarte, J G Muller, and C J Burrows PMCID: PMC148206 Role of the conserved lysine 80 in stabilisation of NF-kappaB p50 DNA binding. I Michalopoulos and R T Hay PMCID: PMC148207 Identification of three conserved regions in the DREF transcription factors from Drosophila melanogaster and Drosophila virilis. Y Takahashi, F Hirose, A Matsukage, and M Yamaguchi PMCID: PMC148208 Increased nuclear factor 1 binding to its nucleosomal site mediated by sequence-dependent DNA structure. P Blomquist, S Belikov, and O Wrange PMCID: PMC148209 Transcription and RNA processing of mammalian genes in Saccharomyces cerevisiae. Z Trachtulec and J Forejt PMCID: PMC148210 Histone stoichiometry and DNA circularization in archaeal nucleosomes. K A Bailey, C S Chow, and J N Reeve PMCID: PMC148211 A DNA polymerase stop assay for G-quadruplex-interactive compounds. H Han, L H Hurley, and M Salazar PMCID: PMC148212 The intrinsic structure and stability of out-of-alternation base pairs in Z-DNA. B F Eichman, G P Schroth, B E Basham, and P S Ho PMCID: PMC148213 Inhibition of a DNA-helicase by peptide nucleic acids. L Bastide, P E Boehmer, G Villani, and B Lebleu PMCID: PMC148214 The crystal structure of the RNA/DNA hybrid r(GAAGAGAAGC). d(GCTTCTCTTC) shows significant differences to that found in solution. G L Conn, T Brown, and G A Leonard PMCID: PMC148215 Structure and function of a small RNA that selectively inhibits internal ribosome entry site-mediated translation. A Venkatesan, S Das, and A Dasgupta PMCID: PMC148216 Tandem repeats finder: a program to analyze DNA sequences. G Benson PMCID: PMC148217 Dimerization of the guanine-adenine repeat strands of DNA. M Vorlícková, I Kejnovská, J Kovanda, and J Kypr PMCID: PMC148218 U1 snRNA is cleaved by RNase III and processed through an Sm site-dependent pathway. R L Seipelt, B Zheng, A Asuru, and B C Rymond PMCID: PMC148219 Conserved sequence preference in DNA binding among recombination proteins: an effect of ssDNA secondary structure. E Biet, J Sun, and M Dutreix PMCID: PMC148220 'LABNOTE', a laboratory notebook system designed for academic genomics groups. M C Imbert, V K Nguyen, S Granjeaud, C Nguyen, and B R Jordan PMCID: PMC148221 AP site structural determinants for Fpg specific recognition. B Castaing, J L Fourrey, N Hervouet, M Thomas, S Boiteux, and C Zelwer PMCID: PMC148222 Nucleotide excision repair affects the stability of long transcribed (CTG*CAG) tracts in an orientation-dependent manner in Escherichia coli. P Parniewski, A Bacolla, A Jaworski, and R D Wells PMCID: PMC148223 Chemical ligation of oligodeoxyribonucleotides on circular DNA templates. J Selvasekaran and K D Turnbull PMCID: PMC148224 The DEAD box RNA helicase family in Arabidopsis thaliana. S Aubourg, M Kreis, and A Lecharny PMCID: PMC148225 5S rRNA gene deletions cause an unexpectedly high fitness loss in Escherichia coli. D Ammons, J Rampersad, and G E Fox PMCID: PMC148226 Regulation by phosphorylation of the zinc finger protein KRC that binds the kappaB motif and V(D)J recombination signal sequences. C Bachmeyer, C H Mak, C Y Yu, and L C Wu PMCID: PMC148227 Immobilization of acrylamide-modified oligonucleotides by co-polymerization. F N Rehman, M Audeh, E S Abrams, P W Hammond, M Kenney, and T C Boles PMCID: PMC148228 A novel assay for examining the molecular reactions at the eukaryotic replication fork: activities of replication protein A required during elongation. A P Walther, M P Bjerke, and M S Wold PMCID: PMC148229 Folding of pyrimidine-enriched RNA fragments from the vicinity of the internal ribosomal entry site of hepatitis A virus. C C Hardin, J L Sneeden, S M Lemon, B A Brown II, R H Guenther, and H Sierzputowska-Gracz PMCID: PMC148230 A detailed study of the substrate specificity of a chimeric restriction enzyme. J Smith, J M Berg, and S Chandrasegaran PMCID: PMC148231 Catalytic and binding mutants of the junction-resolving enzyme endonuclease I of bacteriophage t7: role of acidic residues. M J Parkinson, J R Pöhler, and D M Lilley PMCID: PMC148232 Enhancer of RNA polymerase III gene transcription. M R Sturges, M Bartilson, and L J Peck PMCID: PMC148233 The integral divalent cation within the intermolecular purine*purine. pyrimidine structure: a variable determinant of the potential for and characteristics of the triple helical association. S W Blume, J Lebowitz, W Zacharias, V Guarcello, C A Mayfield, S W Ebbinghaus, P Bates, D E Jones, Jr, J Trent, N Vigneswaran, and D M Miller PMCID: PMC148234 A method of one-step enzyme labelling of short oligonucleotide probes for filter hybridisation. A Guerasimova, I Ivanov, and H Lehrach PMCID: PMC148235 Rapid and efficient cloning of proviral flanking fragments by kanamycin resistance gene complementation. B Fehse, K Kühlcke, A Langer, W Ostertag, and H Lother PMCID: PMC148236 Tetracycline-inducible expression systems with reduced basal activity in mammalian cells. K Forster, V Helbl, T Lederer, S Urlinger, N Wittenburg, and W Hillen PMCID: PMC148237 |
