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Volume 25(20);  October 15, 1997
Research Articles
Dynamics of potentiation and activation: GAGA factor and its role in heat shock gene regulation.
R C Wilkins and J T Lis
Nucleic Acids Res. 1997 October 15; 25(20): 3963–3968.
PMCID: PMC147008
Replication of DNA templates containing 5-formyluracil, a major oxidative lesion of thymine in DNA.
Q M Zhang, H Sugiyama, I Miyabe, S Matsuda, I Saito, and S Yonei
Nucleic Acids Res. 1997 October 15; 25(20): 3969–3973.
PMCID: PMC147013
Saccharomyces cerevisiae mms19 mutants are deficient in transcription-coupled and global nucleotide excision repair.
M Lombaerts, M Tijsterman, R A Verhage, and J Brouwer
Nucleic Acids Res. 1997 October 15; 25(20): 3974–3979.
PMCID: PMC147023
RNA synthesis using a universal, base-stable allyl linker.
X Zhang, B L Gaffney, and R A Jones
Nucleic Acids Res. 1997 October 15; 25(20): 3980–3983.
PMCID: PMC147002
Vaccinia virion protein VP8, the 25 kDa product of the L4R gene, binds single-stranded DNA and RNA with similar affinity.
C D Bayliss and G L Smith
Nucleic Acids Res. 1997 October 15; 25(20): 3984–3990.
PMCID: PMC147007
Cloning of the BssHII restriction-modification system in Escherichia coli : BssHII methyltransferase contains circularly permuted cytosine-5 methyltransferase motifs.
S Xu, J Xiao, J Posfai, R Maunus, and J Benner, 2nd
Nucleic Acids Res. 1997 October 15; 25(20): 3991–3994.
PMCID: PMC147014
Efficient transcription of an immunoglobulin kappa promoter requires specific sequence elements overlapping with and downstream of the transcriptional start site.
M R Pelletier, E N Hatada, G Scholz, and C Scheidereit
Nucleic Acids Res. 1997 October 15; 25(20): 3995–4003.
PMCID: PMC147016
p53-mediated DNA renaturation can mimic strand exchange.
D Jean, D Gendron, L Delbecchi, and P Bourgaux
Nucleic Acids Res. 1997 October 15; 25(20): 4004–4012.
PMCID: PMC147009
The primer binding site on the RNA genome of human and simian immunodeficiency viruses is flanked by an upstream hairpin structure.
B Berkhout
Nucleic Acids Res. 1997 October 15; 25(20): 4013–4017.
PMCID: PMC147018
Isoalloxazine derivatives promote photocleavage of natural RNAs at G.U base pairs embedded within helices.
P Burgstaller, T Hermann, C Huber, E Westhof, and M Famulok
Nucleic Acids Res. 1997 October 15; 25(20): 4018–4027.
PMCID: PMC146990
Transcription activation at class I FNR-dependent promoters: identification of the activating surface of FNR and the corresponding contact site in the C-terminal domain of the RNA polymerase alpha subunit.
S M Williams, N J Savery, S J Busby, and H J Wing
Nucleic Acids Res. 1997 October 15; 25(20): 4028–4034.
PMCID: PMC147020
Functional modulation of estrogen receptor by redox state with reference to thioredoxin as a mediator.
S Hayashi, K Hajiro-Nakanishi, Y Makino, H Eguchi, J Yodoi, and H Tanaka
Nucleic Acids Res. 1997 October 15; 25(20): 4035–4040.
PMCID: PMC146993
Target choice determinants of the Tc1 transposon of Caenorhabditis elegans.
R F Ketting, S E Fischer, and R H Plasterk
Nucleic Acids Res. 1997 October 15; 25(20): 4041–4047.
PMCID: PMC147011
Tc7, a Tc1-hitch hiking transposon in Caenorhabditis elegans.
R Rezsohazy, H G van Luenen, R M Durbin, and R H Plasterk
Nucleic Acids Res. 1997 October 15; 25(20): 4048–4054.
PMCID: PMC147001
A conserved core element is functionally important for maize mitochondrial promoter activity in vitro.
A G Caoile and D B Stern
Nucleic Acids Res. 1997 October 15; 25(20): 4055–4060.
PMCID: PMC146992
Excision of a conjugative transposon in vitro by the Int and Xis proteins of Tn916.
C Rudy, K L Taylor, D Hinerfeld, J R Scott, and G Churchward
Nucleic Acids Res. 1997 October 15; 25(20): 4061–4066.
PMCID: PMC147017
Winding of the DNA helix by divalent metal ions.
Y C Xu and H Bremer
Nucleic Acids Res. 1997 October 15; 25(20): 4067–4071.
PMCID: PMC147022
Minor groove binding of a bis-quaternary ammonium compound: the crystal structure of SN 7167 bound to d(CGCGAATTCGCG)2.
C J Squire, G R Clark, and W A Denny
Nucleic Acids Res. 1997 October 15; 25(20): 4072–4078.
PMCID: PMC146996
The RNA polymerase II preinitiation complex formed in the presence of ATP.
H Serizawa, Z Tsuchihashi, and K Mizumoto
Nucleic Acids Res. 1997 October 15; 25(20): 4079–4084.
PMCID: PMC147005
Core-associated non-duplex sequences distinguishing the genomic and antigenomic self-cleaving RNAs of hepatitis delta virus.
T S Wadkins and M D Been
Nucleic Acids Res. 1997 October 15; 25(20): 4085–4092.
PMCID: PMC147006
The spoU gene of Escherichia coli, the fourth gene of the spoT operon, is essential for tRNA (Gm18) 2'-O-methyltransferase activity.
B C Persson, G Jäger, and C Gustafsson
Nucleic Acids Res. 1997 October 15; 25(20): 4093–4097.
PMCID: PMC146995
CD, absorption and thermodynamic analysis of repeating dinucleotide DNA, RNA and hybrid duplexes [d/r(AC)]12.[d/r(GT/U)]12 and the influence of phosphorothioate substitution.
C L Clark, P K Cecil, D Singh, and D M Gray
Nucleic Acids Res. 1997 October 15; 25(20): 4098–4105.
PMCID: PMC147004
Interaction of human recombination proteins Rad51 and Rad54.
E I Golub, O V Kovalenko, R C Gupta, D C Ward, and C M Radding
Nucleic Acids Res. 1997 October 15; 25(20): 4106–4110.
PMCID: PMC147015
In vivo sequencing of camptothecin-induced topoisomerase I cleavage sites in human colon carcinoma cells.
C Pondarré, D Strumberg, A Fujimori, R Torres-León, and Y Pommier
Nucleic Acids Res. 1997 October 15; 25(20): 4111–4116.
PMCID: PMC147024
The crystal structure of an RNA oligomer incorporating tandem adenosine-inosine mismatches.
R J Carter, K J Baeyens, J SantaLucia, D H Turner, and S R Holbrook
Nucleic Acids Res. 1997 October 15; 25(20): 4117–4122.
PMCID: PMC146998
Factors influencing the extent and selectivity of alkylation within triplexes by reactive G/A motif oligonucleotides.
J N Lampe, I V Kutyavin, R Rhinehart, M W Reed, R B Meyer, and H B Gamper, Jr
Nucleic Acids Res. 1997 October 15; 25(20): 4123–4131.
PMCID: PMC146991
Identification of essential nucleotides of the FP1 element responsible for enhancement of low density lipoprotein receptor gene transcription.
P Dhawan, R Chang, and K D Mehta
Nucleic Acids Res. 1997 October 15; 25(20): 4132–4138.
PMCID: PMC147019
A fiber optic biosensor for fluorimetric detection of triple-helical DNA.
A H Uddin, P A Piunno, R H Hudson, M J Damha, and U J Krull
Nucleic Acids Res. 1997 October 15; 25(20): 4139–4146.
PMCID: PMC146999
The Neisseria gonorrhoeae S.NgoVIII restriction/modification system: a type IIs system homologous to the Haemophilus parahaemolyticus HphI restriction/modification system.
J S Gunn and D C Stein
Nucleic Acids Res. 1997 October 15; 25(20): 4147–4152.
PMCID: PMC147021
Alternative mRNA splice variants of the rat ClC-2 chloride channel gene are expressed in lung: genomic sequence and organization of ClC-2.
S Chu and P L Zeitlin
Nucleic Acids Res. 1997 October 15; 25(20): 4153–4159.
PMCID: PMC147000
Simplified handling of high-density genetic filters using rigid plastic laminates.
D R Bancroft, J K O'Brien, A Guerasimova, and H Lehrach
Nucleic Acids Res. 1997 October 15; 25(20): 4160–4161.
PMCID: PMC146994
Determination of methylation specificity of sequence-specific DNA methyltransferases using matrix assisted laser desorption/ionization time-of-flight mass spectrometry.
T Tamura, Y Araki, S Yamaoka, K Inagaki, and H Tanaka
Nucleic Acids Res. 1997 October 15; 25(20): 4162–4164.
PMCID: PMC146997
Ligation independent cloning irrespective of restriction site compatibility.
C Li and R M Evans
Nucleic Acids Res. 1997 October 15; 25(20): 4165–4166.
PMCID: PMC147003
A dicistronic construct allows easy detection of human CFTR expression from YAC DNA in human cells.
G Vassaux and C Huxley
Nucleic Acids Res. 1997 October 15; 25(20): 4167–4168.
PMCID: PMC147010
A novel method for producing partial restriction digestion of DNA fragments by PCR with 5-methyl-CTP.
K K Wong, L M Markillie, and J D Saffer
Nucleic Acids Res. 1997 October 15; 25(20): 4169–4171.
PMCID: PMC147012
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