| | Research Articles Genomic and cDNA sequence tags of the hyperthermophilic archaeon Pyrobaculum aerophilum. P Völkl, P Markiewicz, C Baikalov, S Fitz-Gibbon, K O Stetter, and J H Miller Nucleic Acids Res. 1996 November 15; 24(22): 4373–4378. PMCID: PMC146273 Two receptor interaction domains in the corepressor, N-CoR/RIP13, are required for an efficient interaction with Rev-erbA alpha and RVR: physical association is dependent on the E region of the orphan receptors. M Downes, L J Burke, P J Bailey, and G E Muscat Nucleic Acids Res. 1996 November 15; 24(22): 4379–4386. PMCID: PMC146280 XRCC1 polypeptide interacts with DNA polymerase beta and possibly poly (ADP-ribose) polymerase, and DNA ligase III is a novel molecular 'nick-sensor' in vitro. K W Caldecott, S Aoufouchi, P Johnson, and S Shall Nucleic Acids Res. 1996 November 15; 24(22): 4387–4394. PMCID: PMC146288 Dissociation of long-chain duplex RNA can occur via strand displacement in vitro: biological implications. M Homann, W Nedbal, and G Sczakiel Nucleic Acids Res. 1996 November 15; 24(22): 4395–4400. PMCID: PMC146270 In vitro selection of hammerhead ribozymes containing a bulged nucleotide in stem II. J B Thomson, S T Sigurdsson, A Zeuch, and F Eckstein Nucleic Acids Res. 1996 November 15; 24(22): 4401–4406. PMCID: PMC146259 Identification of a (CUG)n triplet repeat RNA-binding protein and its expression in myotonic dystrophy. L T Timchenko, J W Miller, N A Timchenko, D R DeVore, K V Datar, L Lin, R Roberts, C T Caskey, and M S Swanson Nucleic Acids Res. 1996 November 15; 24(22): 4407–4414. PMCID: PMC146274 Sequential excision of internal eliminated DNA sequences in the differentiating macronucleus of the hypotrichous ciliate Stylonychia lemnae. J Wen, C Maercker, and H J Lipps Nucleic Acids Res. 1996 November 15; 24(22): 4415–4419. PMCID: PMC146267 Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae. R Himmelreich, H Hilbert, H Plagens, E Pirkl, B C Li, and R Herrmann Nucleic Acids Res. 1996 November 15; 24(22): 4420–4449. PMCID: PMC146264 Characterization of the basal inhibitor of class II transcription NC2 from Saccharomyces cerevisiae. A Goppelt and M Meisterernst Nucleic Acids Res. 1996 November 15; 24(22): 4450–4455. PMCID: PMC146262 Identification of two separate domains in the influenza virus PB1 protein involved in the interaction with the PB2 and PA subunits: a model for the viral RNA polymerase structure. S González, T Zürcher, and J Ortín Nucleic Acids Res. 1996 November 15; 24(22): 4456–4463. PMCID: PMC146260 p53 regulates the minimal promoter of the human topoisomerase IIalpha gene. M I Sandri, R J Isaacs, W M Ongkeko, A L Harris, I D Hickson, M Broggini, and F Vikhanskaya Nucleic Acids Res. 1996 November 15; 24(22): 4464–4470. PMCID: PMC146283 Regulation of the double-stranded RNA-dependent protein kinase PKR by RNAs encoded by a repeated sequence in the Epstein-Barr virus genome. A Elia, K G Laing, A Schofield, V J Tilleray, and M J Clemens Nucleic Acids Res. 1996 November 15; 24(22): 4471–4478. PMCID: PMC146269 The homeodomain protein Pho2 and the basic-helix-loop-helix protein Pho4 bind DNA cooperatively at the yeast PHO5 promoter. S Barbarić, M Münsterkötter, J Svaren, and W Hörz Nucleic Acids Res. 1996 November 15; 24(22): 4479–4486. PMCID: PMC146284 DNA binding of Jun and Fos bZip domains: homodimers and heterodimers induce a DNA conformational change in solution. M John, R Leppik, S J Busch, M Granger-Schnarr, and M Schnarr Nucleic Acids Res. 1996 November 15; 24(22): 4487–4494. PMCID: PMC146289 Mapping genes within a YAC by computer-assisted interpretation of partial restriction digestions. D C Shields, A Butler, K R Mosurski, M T Walsh, and A S Whitehead Nucleic Acids Res. 1996 November 15; 24(22): 4495–4500. PMCID: PMC146272 Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes. N Sugimoto, S Nakano, M Yoneyama, and K Honda Nucleic Acids Res. 1996 November 15; 24(22): 4501–4505. PMCID: PMC146261 Parallel and antiparallel A*A-T intramolecular triple helices. C Dagneaux, H Gousset, A K Shchyolkina, M Ouali, R Letellier, J Liquier, V L Florentiev, and E Taillandier Nucleic Acids Res. 1996 November 15; 24(22): 4506–4512. PMCID: PMC146268 The high affinity ligand binding conformation of the nuclear 1,25-dihydroxyvitamin D3 receptor is functionally linked to the transactivation domain 2 (AF-2). S Nayeri, J P Kahlen, and C Carlberg Nucleic Acids Res. 1996 November 15; 24(22): 4513–4518. PMCID: PMC146265 Interstrand cross-linking reaction in triplexes containing a monofunctional transplatin-adduct. C Colombier, B Lippert, and M Leng Nucleic Acids Res. 1996 November 15; 24(22): 4519–4524. PMCID: PMC146263 Increasing the distance between the snRNA promoter and the 3' box decreases the efficiency of snRNA 3'-end formation. L Ramamurthy, T C Ingledue, D R Pilch, B K Kay, and W F Marzluff Nucleic Acids Res. 1996 November 15; 24(22): 4525–4534. PMCID: PMC146281 Chemical methods of DNA and RNA fluorescent labeling. D Proudnikov and A Mirzabekov Nucleic Acids Res. 1996 November 15; 24(22): 4535–4542. PMCID: PMC146275 Similar upstream regulatory elements of genes that encode the two largest subunits of RNA polymerase II in Saccharomyces cerevisiae. D B Jansma, J Archambault, O Mostachfi, and J D Friesen Nucleic Acids Res. 1996 November 15; 24(22): 4543–4551. PMCID: PMC146278 Expression of the gene for the POU domain transcription factor Tst-1/Oct6 is regulated by an estrogen-dependent enhancer. K Renner, E Sock, J R Bermingham, Jr, and M Wegner Nucleic Acids Res. 1996 November 15; 24(22): 4552–4557. PMCID: PMC146271 Inhibition of the erbB-2 tyrosine kinase receptor in breast cancer cells by phosphoromonothioate and phosphorodithioate antisense oligonucleotides. J P Vaughn, J Stekler, S Demirdji, J K Mills, M H Caruthers, J D Iglehart, and J R Marks Nucleic Acids Res. 1996 November 15; 24(22): 4558–4564. PMCID: PMC146276 Molecular analysis of RNA polymerase alpha subunit gene from Streptomyces coelicolor A3(2). E J Cho, J B Bae, J G Kang, and J H Roe Nucleic Acids Res. 1996 November 15; 24(22): 4565–4571. PMCID: PMC146286 Cleavage of single- and double-stranded DNAs containing an abasic residue by Escherichia coli exonuclease III (AP endonuclease VI). T Shida, M Noda, and J Sekiguchi Nucleic Acids Res. 1996 November 15; 24(22): 4572–4576. PMCID: PMC146277 In vitro transcription of a poly(dA) x poly(dT)-containing sequence is inhibited by interaction between the template and its transcripts. R Kiyama and M Oishi Nucleic Acids Res. 1996 November 15; 24(22): 4577–4583. PMCID: PMC146282 Synthesis and thermodynamics of oligonucleotides containing chirally pure R(P) methylphosphonate linkages. M A Reynolds, R I Hogrefe, J A Jaeger, D A Schwartz, T A Riley, W B Marvin, W J Daily, M M Vaghefi, T A Beck, S K Knowles, R E Klem, and L J Arnold, Jr Nucleic Acids Res. 1996 November 15; 24(22): 4584–4591. PMCID: PMC146287 Optimized codon usage and chromophore mutations provide enhanced sensitivity with the green fluorescent protein. T T Yang, L Cheng, and S R Kain Nucleic Acids Res. 1996 November 15; 24(22): 4592–4593. PMCID: PMC146266 Rapid construction in yeast of complex targeting vectors for gene manipulation in the mouse. T Storck, U Krüth, R Kolhekar, R Sprengel, and P H Seeburg Nucleic Acids Res. 1996 November 15; 24(22): 4594–4596. PMCID: PMC146279 A cost effective base-matching assay with low backgrounds. X Su, G Mushinsky, and A M Comeau Nucleic Acids Res. 1996 November 15; 24(22): 4596–4597. PMCID: PMC146285 |