| | Research Articles DNA damage by peroxynitrite characterized with DNA repair enzymes. B Epe, D Ballmaier, I Roussyn, K Briviba, and H Sies PMCID: PMC146252 Differential effects of the incorporation of 1-(2-deoxy-2-fluoro-beta-D-arabinofuranosyl)-5-iodouracil (FIAU) on the binding of the transcription factors, AP-1 and TFIID, to their cognate target DNA sequences. K A Staschke, K K Richardson, T E Mabry, A J Baxter, J C Scheuring, D M Huffman, W C Smith, F C Richardson, and J M Colacino PMCID: PMC146219 Investigation of some properties of oligodeoxynucleotides containing 4'-thio-2'-deoxynucleotides: duplex hybridization and nuclease sensitivity. G D Jones, E A Lesnik, S R Owens, L M Risen, and R T Walker PMCID: PMC146226 Binding, bending and cleavage of DNA substrates by the homing endonuclease Pl-SceI. W Wende, W Grindl, F Christ, A Pingoud, and V Pingoud PMCID: PMC146225 DNA sequence specificity of a naphthylquinoline triple helix-binding ligand. S A Cassidy, L Strekowski, and K R Fox PMCID: PMC146223 The CBP co-activator stimulates E2F1/DP1 activity. D Trouche, A Cook, and T Kouzarides PMCID: PMC146244 Statistical evidence for a biochemical pathway of natural, sequence-targeted G/C to C/G transversion mutagenesis in Haemophilus influenzae Rd. R Merkl and H J Fritz PMCID: PMC146257 Inverse splicing of a discontinuous pre-mRNA intron generates a circular exon in a HeLa cell nuclear extract. S Braun, H Domdey, and K Wiebauer PMCID: PMC146224 Proximal promoter elements of the human zeta-globin gene confer embryonic-specific expression on a linked reporter gene in transgenic mice. M D Pondel, J A Sharpe, S Clark, L Pearson, W G Wood, and N J Proudfoot PMCID: PMC146237 Monomeric scAlu and nascent dimeric Alu RNAs induced by adenovirus are assembled into SRP9/14-containing RNPs in HeLa cells. D Y Chang, K Hsu, and R J Maraia PMCID: PMC146241 Effects on NaeI-DNA recognition of the leucine to lysine substitution that transforms restriction endonuclease NaeI to a topoisomerase: a model for restriction endonuclease evolution. K Jo and M D Topal PMCID: PMC146227 Efficient triple helix formation by oligodeoxyribonucleotides containing alpha- or beta-2-amino-5-(2-deoxy-D-ribofuranosyl) pyridine residues. P J Bates, C A Laughton, T C Jenkins, D C Capaldi, P D Roselt, C B Reese, and S Neidle PMCID: PMC146246 Characterization of the rat Class 3 aldehyde dehydrogenase gene promoter. Y Q Xie, K Takimoto, H C Pitot, W K Miskimins, and R Lindahl PMCID: PMC146258 A method for linking yeast artificial chromosomes. Z Larin, S S Taylor, and C Tyler-Smith PMCID: PMC146230 Secondary structure of the panhandle RNA of influenza virus A studied by NMR spectroscopy. H K Cheong, C Cheong, and B S Choi PMCID: PMC146218 Large DNA fragment sizing by flow cytometry: application to the characterization of P1 artificial chromosome (PAC) clones. Z Huang, J T Petty, B O'Quinn, J L Longmire, N C Brown, J H Jett, and R A Keller PMCID: PMC146222 Detection of covalent triplex within human cells. A L Guieysse, D Praseuth, M Grigoriev, A Harel-Bellan, and C Hélène PMCID: PMC146220 Asparagine 212 is essential for abasic site recognition by the human DNA repair endonuclease HAP1. D G Rothwell and I D Hickson PMCID: PMC146231 Saccharomyces cerevisiae IRE2/HAC1 is involved in IRE1-mediated KAR2 expression. J Nikawa, M Akiyoshi, S Hirata, and T Fukuda PMCID: PMC146251 Characterization of a protein recognizing minor groove binders-damaged DNA. G Colella, M Bonfanti, M D'Incalci, and M Broggini PMCID: PMC146256 Stability of an inverted repeat in a human fibrosarcoma cell. P R Kramer, J R Stringer, and R R Sinden PMCID: PMC146229 Topoisomerase poisons activate the transcription factor NF-kappaB in ACH-2 and CEM cells. B Piret and J Piette PMCID: PMC146228 A possible origin of newly-born bacterial genes: significance of GC-rich nonstop frame on antisense strand. K Ikehara, F Amada, S Yoshida, Y Mikata, and A Tanaka PMCID: PMC146247 Different thermostabilities of FLP and Cre recombinases: implications for applied site-specific recombination. F Buchholz, L Ringrose, P O Angrand, F Rossi, and A F Stewart PMCID: PMC146240 Frequent oligonucleotides and peptides of the Haemophilus influenzae genome. S Karlin, J Mrázek, and A M Campbell PMCID: PMC146255 Ferrocene-oligonucleotide conjugates for electrochemical probing of DNA. T Ihara, Y Maruo, S Takenaka, and M Takagi PMCID: PMC146233 Transcriptional repression by p53 involves molecular interactions distinct from those with the TATA box binding protein. G Farmer, P Friedlander, J Colgan, J L Manley, and C Prives PMCID: PMC146238 Small Maf proteins interact with the human transcription factor TCF11/Nrf1/LCR-F1. O Johnsen, N Skammelsrud, L Luna, M Nishizawa, H Prydz, and A B Kolstø PMCID: PMC146217 Drosophila ribosomal protein PO contains apurinic/apyrimidinic endonuclease activity. A Yacoub, M R Kelley, and W A Deutsch PMCID: PMC146249 mRNA turnover in yeast promoted by the MATalpha1 instability element. G Caponigro and R Parker PMCID: PMC146253 Sequence analysis of an 81 kb contig from Arabidopsis thaliana chromosome III. F Quigley, P Dao, A Cottet, and R Mache PMCID: PMC146221 Bacteriophage T4 regA protein binds RNA as a monomer, overcoming dimer interactions. C A Phillips, J Gordon, and E K Spicer PMCID: PMC146235 Sequences within and flanking hypersensitive sites 3 and 2 of the beta-globin locus control region required for synergistic versus additive interaction with the epsilon-globin gene promoter. J D Jackson, W Miller, and R C Hardison PMCID: PMC146243 Effect of telomere length on telomeric gene expression. C N Sprung, L Sabatier, and J P Murnane PMCID: PMC146236 In simple synthetic promoters YY1-induced DNA bending is important in transcription activation and repression. J Kim and D J Shapiro PMCID: PMC146254 The translational placement of nucleosome cores in vitro determines the access of the transacting factor suGF1 to DNA. H G Patterton and J Hapgood PMCID: PMC146216 Electroporation efficiency in mammalian cells is increased by dimethyl sulfoxide (DMSO). H Melkonyan, C Sorg, and M Klempt PMCID: PMC146239 Expression of peptides encoded by exons in cloned mammalian DNA. S Kreissig, K Schüddekopf, N Dear, and T Boehm PMCID: PMC146242 A simple method for 3'-labeling of RNA. Z Huang and J W Szostak PMCID: PMC146232 An efficient DDAB-mediated transfection of Drosophila S2 cells. K Han PMCID: PMC146234 A sensitive procedure for mapping the boundaries of RNA elements binding in vitro translated proteins defines a minimal hepatitis B virus encapsidation signal. J Beck and M Nassal PMCID: PMC146245 Expression cloning of cDNA by phage display selection. J Light, R Maki, and N Assa-Munt PMCID: PMC146248 Single locus microsatellites isolated using 5' anchored PCR. P J Fisher, R C Gardner, and T E Richardson PMCID: PMC146250 |
